BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00052185
         (389 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subc...    43   5e-06
gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japo...    43   5e-06

>gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1288

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +2

Query: 155  DVN*LINSGSIKSTSRFVFILSDIIVSCRPCK*IVIARSTIETKLIAL 298
            D N + ++  IK+TS +VF L   +VS + CK  ++ RSTIE +LIAL
Sbjct: 1164 DSNWISDADEIKATSGYVFTLGGGVVSWKSCKQTILTRSTIEAELIAL 1211



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 90   RVLKYLRGIMDYNLIYTGYLDVM 158
            RV++YL+G M Y + YTGYL V+
Sbjct: 1137 RVMRYLKGTMSYGIHYTGYLKVL 1159


>gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +2

Query: 155  DVN*LINSGSIKSTSRFVFILSDIIVSCRPCK*IVIARSTIETKLIAL 298
            D N + ++  IK+TS +VF L   +VS + CK  ++ RSTIE +LIAL
Sbjct: 1156 DSNWISDADEIKATSGYVFTLGGGVVSWKSCKQTILTRSTIEAELIAL 1203



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 90   RVLKYLRGIMDYNLIYTGYLDVM 158
            RV++YL+G M Y + YTGYL V+
Sbjct: 1129 RVMRYLKGTMSYGIHYTGYLKVL 1151