BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00052157
         (571 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   117   3e-37
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...   125   7e-37
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434...   152   1e-34
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]         116   2e-33
gb|ABG22121.1| polyprotein [Solanum melongena]                        145   1e-32
ref|XP_008448404.1| PREDICTED: retrovirus-related Pol polyprotei...   111   8e-32
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   132   9e-30
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   131   2e-28
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     131   2e-28
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           124   3e-28
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   129   9e-28
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     129   9e-28
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   120   3e-27
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     126   6e-27
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   124   2e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   124   2e-26
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   115   3e-25
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   120   4e-25
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             114   5e-25
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               117   3e-24

>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  117 bits (293), Expect(3) = 3e-37
 Identities = 60/113 (53%), Positives = 78/113 (69%)
 Frame = +1

Query: 139  FMMSKAYTRNPYDPCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIK 318
            FM+   + R+PYD CVY  K+  G YIYLLLYVDDMLI  K  S + KLK  L+S+F +K
Sbjct: 1071 FMVEHGFDRSPYDCCVYHSKVEDGSYIYLLLYVDDMLIAAKKKSDVLKLKKLLSSEFDMK 1130

Query: 319  DLGEAKRILGMEIERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASH 477
            DLG AK+ILGMEI RD    K+ L+QK Y+ K+L +F + S  KS+ TP A++
Sbjct: 1131 DLGAAKKILGMEIYRDHGRKKLFLSQKSYILKVLDRFGM-STAKSIDTPAAAN 1182



 Score = 50.8 bits (120), Expect(3) = 3e-37
 Identities = 23/34 (67%), Positives = 24/34 (70%)
 Frame = +2

Query: 38   GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVS 139
            GF   GKE   C LKK LYGLKQS RQWY+RF S
Sbjct: 1037 GFVVPGKEKFACSLKKSLYGLKQSPRQWYKRFDS 1070



 Score = 34.3 bits (77), Expect(3) = 3e-37
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = +2

Query: 482  QLSAVISSKTVEDREYMFHVSYASTVGSLI 571
            +LS V+S ++ E++EYM  V YAS VGSL+
Sbjct: 1184 RLSVVLSPQSDEEKEYMSKVPYASAVGSLM 1213


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score =  125 bits (315), Expect(2) = 7e-37
 Identities = 61/121 (50%), Positives = 89/121 (73%), Gaps = 3/121 (2%)
 Frame = +1

Query: 139 FMMSKAYTRNPYDPCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIK 318
           FM+ + Y ++ YD C+YF     G +IYLLLYVDDMLI  +  S I KLK++L+++F +K
Sbjct: 332 FMIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRDKSLIKKLKTELSNEFDMK 391

Query: 319 DLGEAKRILGMEIERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF---AAF 489
           +LG AK+ILGMEI RDR+  K+ L+Q+ Y++++L +FN+ +N K VSTPLA+HF   + F
Sbjct: 392 ELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNM-NNCKPVSTPLAAHFKLSSEF 450

Query: 490 C 492
           C
Sbjct: 451 C 451



 Score = 55.1 bits (131), Expect(2) = 7e-37
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 38  GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVS 139
           GF A GKE+LVC+LKK LYGLKQ+ RQWY+RF S
Sbjct: 298 GFIAPGKEHLVCRLKKSLYGLKQAPRQWYKRFHS 331


>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
          Length = 1100

 Score =  152 bits (383), Expect = 1e-34
 Identities = 86/169 (50%), Positives = 111/169 (65%), Gaps = 9/169 (5%)
 Frame = +1

Query: 1   GDLDEEIYMTQPGFQSYR*GESSV*T*EVAL---------WFEAITETVV*AICKFMMSK 153
           GDL+EEIYM+QP        ++ V   E +L         W++   E        FM+ +
Sbjct: 71  GDLEEEIYMSQPEGFKVAGKKNWVCKLEKSLYGLKQSPRQWYKRFDE--------FMIGQ 122

Query: 154 AYTRNPYDPCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEA 333
            YTR+ YD CVYF KL    +IYLLLYVDDMLIT KS   I +LK+QL+++F++KDLGEA
Sbjct: 123 KYTRSHYDHCVYFRKLQDETFIYLLLYVDDMLITCKSKVEIERLKTQLSNEFEMKDLGEA 182

Query: 334 KRILGMEIERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
           ++ILGMEIERDR   KI L QK YL+K+L +F +  N+K VSTPLASHF
Sbjct: 183 RKILGMEIERDRAKGKISLCQKQYLKKVLQRFRMNENSKLVSTPLASHF 231



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
 Frame = +2

Query: 38  GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVSL**ARLTPETRMTHVFIFASYQVEST 217
           GFK  GK+N VCKL+K LYGLKQS RQWY+RF      +    +   H   F   Q E T
Sbjct: 84  GFKVAGKKNWVCKLEKSLYGLKQSPRQWYKRFDEFMIGQKYTRSHYDHCVYFRKLQDE-T 142

Query: 218 SIY---YYM*MICL*LSRA------IQLSTS*KVSWHPSSR*KIWGKLREY*AWRLRETG 370
            IY   Y   M+    S+        QLS   ++     +R KI G   E    R R  G
Sbjct: 143 FIYLLLYVDDMLITCKSKVEIERLKTQLSNEFEMKDLGEAR-KILGMEIE----RDRAKG 197

Query: 371 RLAK*S*LKKGICRNCYISST---FRVIQNL*VHR*PHI--LQLSAVISSKTVEDREYMF 535
           +++        +C+  Y+      FR+ +N  +   P     +LSA +S KTVE+ +YM 
Sbjct: 198 KIS--------LCQKQYLKKVLQRFRMNENSKLVSTPLASHFKLSASMSPKTVEESQYMA 249

Query: 536 HVSYASTVGSLI 571
            + YA+ VGSL+
Sbjct: 250 QIPYANVVGSLM 261


>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
          Length = 375

 Score =  116 bits (290), Expect(2) = 2e-33
 Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 3/127 (2%)
 Frame = +1

Query: 139 FMMSKAYTRNPYDPCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIK 318
           FM+S  + R+ +D CVY  K   G  IYLLLYVDDMLI  KS   I  LK QL+S+F +K
Sbjct: 40  FMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMK 98

Query: 319 DLGEAKRILGMEIERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF---AAF 489
           +LG AK+ILGMEI RDR +  + L+Q+ Y++K+L +FN+  + K VSTP+ SHF   A  
Sbjct: 99  NLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMH-DAKPVSTPIVSHFKLSALQ 157

Query: 490 CSYIFED 510
           C+   ED
Sbjct: 158 CASTDED 164



 Score = 53.1 bits (126), Expect(2) = 2e-33
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 38  GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVS 139
           GF   GKE+ VCKLK+ LYGLKQS RQWY+RF S
Sbjct: 6   GFVVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDS 39


>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  145 bits (366), Expect = 1e-32
 Identities = 80/159 (50%), Positives = 103/159 (64%)
 Frame = +1

Query: 1   GDLDEEIYMTQPGFQSYR*GESSV*T*EVALWFEAITETVV*AICKFMMSKAYTRNPYDP 180
           GDL EEIY            E+ V     +L+ +  +        KFM  + YTR+ YD 
Sbjct: 9   GDLKEEIYYDFSQGIKVASKENWVCKLNKSLYMKQSSRQWYKQFDKFMQDQRYTRSKYDH 68

Query: 181 CVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEIE 360
           CVYF KL  G Y+YLLLYVDDMLI  KS   I++LK+QL+ +F++KDLGEAK+ILGMEI 
Sbjct: 69  CVYFHKLQNGSYVYLLLYVDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEAKKILGMEIS 128

Query: 361 RDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASH 477
           RDR+  K+ LTQK YL+K+L +F I  ++K VSTPLA H
Sbjct: 129 RDRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPH 167


>ref|XP_008448404.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Cucumis melo]
          Length = 227

 Score =  111 bits (277), Expect(3) = 8e-32
 Identities = 57/114 (50%), Positives = 79/114 (69%)
 Frame = +1

Query: 139 FMMSKAYTRNPYDPCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIK 318
           F+    +  + YDPCV + KL  G  IYLLLYVDDML+  K+ + +N++K QL ++F++K
Sbjct: 57  FINKIGFMSSLYDPCVCYKKLTNGSLIYLLLYVDDMLLAGKNLTKLNEIKEQLKNEFEMK 116

Query: 319 DLGEAKRILGMEIERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
           DLG AKRILGMEI R R    + L+QK Y +K+L KFN+ +N K+VSTP+   F
Sbjct: 117 DLGSAKRILGMEITRQRSIRGLFLSQKQYTKKVLAKFNM-ANAKAVSTPVGQQF 169



 Score = 48.9 bits (115), Expect(3) = 8e-32
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +2

Query: 38  GFKATGKENLVCKLKKLLYGLKQSLRQWYRRF 133
           GF+A GK +LVCKLKK LYGLKQS R W +RF
Sbjct: 23  GFEAKGKIDLVCKLKKSLYGLKQSPRCWNKRF 54



 Score = 24.3 bits (51), Expect(3) = 8e-32
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 482 QLSAVISSKTVEDREYMFHVSYASTVGSLI 571
           +LSA  S     +R+ M +V Y++ +GSLI
Sbjct: 170 KLSAKDSPNESTERQAMSNVPYSNAIGSLI 199


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  132 bits (331), Expect(2) = 9e-30
 Identities = 75/161 (46%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQP-GFQSYR*GESSV*T*EVALWFEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+EEIYM QP GF      +      +     +            FM+S  + RN YD
Sbjct: 1235 GNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYD 1294

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVYF  LP G +IYLLLYVDDMLI  K+ + INKLK  L+S+F++KDLG AK+ILGMEI
Sbjct: 1295 SCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEI 1354

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             RDR    + ++Q+ Y++KL+  F++  ++K VSTPLA HF
Sbjct: 1355 WRDRDAGLLYVSQQKYIEKLMQAFHM-DHSKPVSTPLAQHF 1394



 Score = 25.0 bits (53), Expect(2) = 9e-30
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 509  TVEDREYMFHVSYASTVGSLI 571
            T E+ EYM  V Y+S VGSL+
Sbjct: 1404 TDEEVEYMKSVPYSSVVGSLM 1424


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  131 bits (330), Expect = 2e-28
 Identities = 77/161 (47%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E+ V   + +L+  +            FM+S+ + R+ YD
Sbjct: 678  GELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYD 737

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K+  G  IYLLLYVDDMLI  K  S I KLK+QL+S+F++KDLG AK+ILGMEI
Sbjct: 738  NCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEI 796

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             R+R + K+ L+QKGY++K+L +FN+  + K VSTPLA+HF
Sbjct: 797  TRERHSGKLYLSQKGYIEKVLRRFNMH-DAKPVSTPLAAHF 836


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  131 bits (329), Expect = 2e-28
 Identities = 77/161 (47%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E+ V   + +L+  +            FM S+ + R+ YD
Sbjct: 815  GELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYD 874

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K+  G  IYLLLYVDDMLI  K  S I KLK+QL+S+F++KDLG AK+ILGMEI
Sbjct: 875  SCVYL-KVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEI 933

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             R+R + K+ L+QKGY++K+L +FN+  + K VSTPLA+HF
Sbjct: 934  TRERHSGKLYLSQKGYIEKVLRRFNMH-DAKPVSTPLAAHF 973


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  124 bits (311), Expect(2) = 3e-28
 Identities = 76/161 (47%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E  V   + +L+  +            FM+S ++ R+ YD
Sbjct: 939  GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 998

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K   G  IYLLLYVDDMLI  KS   I KLK  L+S+F +KDLG AK+ILGMEI
Sbjct: 999  SCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEI 1057

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             RDRK+  + L+Q  Y++K+L +FN+Q N K+VSTP+A HF
Sbjct: 1058 SRDRKSGLLFLSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHF 1097



 Score = 27.7 bits (60), Expect(2) = 3e-28
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +2

Query: 470  PHILQLSAVISSKTVEDREYMFHVSYASTVGSLI 571
            PH  +LSA     T  + EYM  V Y+S VGSL+
Sbjct: 1095 PHF-KLSAAQCPSTDAEIEYMSRVPYSSAVGSLM 1127


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  129 bits (324), Expect = 9e-28
 Identities = 77/161 (47%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E+ V   + +L+  +            FM+S+ + R+ YD
Sbjct: 1143 GELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYD 1202

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K+  G  IYLLLYVDDMLI  K  S I KLK+QL+S+F++KDLG AK+ILGMEI
Sbjct: 1203 SCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEI 1261

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             R R + K+ L+QKGY++K+L +FN+  + K VSTPLA+HF
Sbjct: 1262 TRKRHSFKLYLSQKGYIEKVLRRFNMH-DAKPVSTPLAAHF 1301



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
 Frame = +2

Query: 38   GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVSL**ARLTPETRMTHVFIFASYQVEST 217
            GF   GKENLVC+LKK LYGLKQS RQWY+RF S     L+ + R ++       +V   
Sbjct: 1156 GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF---MLSQKFRRSNYDSCVYLKVVDG 1212

Query: 218  SIYYYM*MICL*LSRAIQLSTS*KVSWHPSSR*KI--WGKLREY*AWRLRETGRLAK*S* 391
            S  Y +  +   L  A   S   K+    SS  ++   G  ++     +       K   
Sbjct: 1213 SAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYL 1272

Query: 392  LKKG----ICRNCYISSTFRVIQNL*VHR*PHILQLSAVISSKTVEDREYMFHVSYASTV 559
             +KG    + R   +     V   L  H      +LS+ +  ++  D EYM  V Y+S V
Sbjct: 1273 SQKGYIEKVLRRFNMHDAKPVSTPLAAH-----FRLSSDLCPQSDYDIEYMSRVPYSSAV 1327

Query: 560  GSLI 571
            GSL+
Sbjct: 1328 GSLM 1331


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  129 bits (324), Expect = 9e-28
 Identities = 76/161 (47%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E+ V   + +L+  +            FM+S+ +  + YD
Sbjct: 908  GELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYD 967

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K+  G  IYLLLYVDDMLI  K  S I KLK+QL+S+F++KDLG AK+ILGMEI
Sbjct: 968  SCVYL-KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEI 1026

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             R+R + K+ L+QKGY++K+L +FN+  + K VSTPLA+HF
Sbjct: 1027 TRERHSGKLYLSQKGYIEKVLRRFNMH-DAKPVSTPLAAHF 1066



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 9/187 (4%)
 Frame = +2

Query: 38   GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVSL**ARLTPETRMTHVFIFASYQVEST 217
            GF   GKENLVC+LKK LYGLKQS RQWY+RF S     L+ + R+++       +V   
Sbjct: 921  GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF---MLSQKFRISNYDSCVYLKVVDG 977

Query: 218  SIYYYM*MICL*LSRAIQLSTS*KVSWHPSSR*KIWG-----KLREY*AWRLRETGRLAK 382
            S+ Y +  +   L  A   S   K+    SS  ++       K+      R R +G+L  
Sbjct: 978  SVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYL 1037

Query: 383  *S*LKKG----ICRNCYISSTFRVIQNL*VHR*PHILQLSAVISSKTVEDREYMFHVSYA 550
                +KG    + R   +     V   L  H      +LS+ +   +  D EYM  V Y+
Sbjct: 1038 ---SQKGYIEKVLRRFNMHDAKPVSTPLAAH-----FRLSSDLCPLSDYDIEYMSRVPYS 1089

Query: 551  STVGSLI 571
            S VGSL+
Sbjct: 1090 SAVGSLM 1096


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  120 bits (302), Expect(2) = 3e-27
 Identities = 75/161 (46%), Positives = 100/161 (62%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E  V   + +L+  +            FM+S ++ R+ YD
Sbjct: 937  GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 996

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K   G  IYLLLYVDDMLI  KS   I KLK  L+S+F +KDLG AK+IL MEI
Sbjct: 997  SCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEI 1055

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             RDRK+  + L+Q  Y++K+L +FN+Q N K+VSTP+A HF
Sbjct: 1056 SRDRKSGLLFLSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHF 1095



 Score = 27.7 bits (60), Expect(2) = 3e-27
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +2

Query: 470  PHILQLSAVISSKTVEDREYMFHVSYASTVGSLI 571
            PH  +LSA     T  + EYM  V Y+S VGSL+
Sbjct: 1093 PHF-KLSAAQCPSTDAEIEYMSRVPYSSAVGSLM 1125


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  126 bits (317), Expect = 6e-27
 Identities = 76/161 (47%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E+ V   + +L+  +            FM+S+ + R+ YD
Sbjct: 845  GELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYD 904

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K+  G  IYLLLYVDDMLI  K  S I KLK+QL+S+F++KDLG AK+ILGMEI
Sbjct: 905  SCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEI 963

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF 480
             R+R + K+ L+QK Y++K+LH+FN+  + K VST LA+HF
Sbjct: 964  TRERHSGKLYLSQKCYIEKVLHRFNMH-DAKLVSTLLAAHF 1003



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 12/190 (6%)
 Frame = +2

Query: 38   GFKATGKENLVCKLKKLLYGLKQSLRQWYRRFVSL**ARLTPETRMTHVFIFASYQVEST 217
            GF   GKENLVC+LKK LYGLKQS RQWY+RF S     L+ + R ++       +V   
Sbjct: 858  GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF---MLSQKFRRSNYDSCVYLKVVDG 914

Query: 218  SIYYYM*MICL*LSRAIQLSTS*KVSWHPSSR*KIWG-----KLREY*AWRLRETGRLAK 382
            S  Y +  +   L  A   S   K+    SS  ++       K+      R R +G+L  
Sbjct: 915  SAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLY- 973

Query: 383  *S*LKKGICRNCYISSTFRVIQNL*VHR*PHI-------LQLSAVISSKTVEDREYMFHV 541
                   + + CYI    +V+    +H    +        +LS+ +  ++  D EYM  V
Sbjct: 974  -------LSQKCYIE---KVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRV 1023

Query: 542  SYASTVGSLI 571
             Y+S V SL+
Sbjct: 1024 PYSSAVSSLM 1033


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  124 bits (312), Expect = 2e-26
 Identities = 80/171 (46%), Positives = 105/171 (61%), Gaps = 4/171 (2%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E  V   + +L+  +            FM+S ++ R+ YD
Sbjct: 937  GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 996

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K   G  IYLLLYVDDMLI  KS   I KLK  L+S+F +KDLG AK+ILGMEI
Sbjct: 997  SCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEI 1055

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF---AAFCSYI 501
             RDRK+  + L+Q  Y++K+L +FN+Q N K+VSTP+A HF   AA C  I
Sbjct: 1056 SRDRKSGLLFLSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHFKLSAAQCPSI 1105


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  124 bits (312), Expect = 2e-26
 Identities = 80/171 (46%), Positives = 105/171 (61%), Gaps = 4/171 (2%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E  V   + +L+  +            FM+S ++ R+ YD
Sbjct: 937  GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 996

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K   G  IYLLLYVDDMLI  KS   I KLK  L+S+F +KDLG AK+ILGMEI
Sbjct: 997  SCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEI 1055

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF---AAFCSYI 501
             RDRK+  + L+Q  Y++K+L +FN+Q N K+VSTP+A HF   AA C  I
Sbjct: 1056 SRDRKSGLLFLSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHFKLSAAQCPSI 1105


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease [Nicotiana tabacum]
            gi|20045|emb|CAA32025.1| unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  115 bits (287), Expect(2) = 3e-25
 Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQP-GFQSYR*GESSV*T*EVALWFEAITETVV*AICKFMMSKAYTRNPYD 177
            GDL+EEIYM QP GF+            +     +            FM S+ Y +   D
Sbjct: 930  GDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSD 989

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
            PCVYF +     +I LLLYVDDMLI  K    I KLK  L+  F +KDLG A++ILGM+I
Sbjct: 990  PCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKI 1049

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASH 477
             R+R + K+ L+Q+ Y++++L +FN++ N K VSTPLA H
Sbjct: 1050 VRERTSRKLWLSQEKYIERVLERFNMK-NAKPVSTPLAGH 1088



 Score = 26.9 bits (58), Expect(2) = 3e-25
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 479  LQLSAVISSKTVEDREYMFHVSYASTVGSLI 571
            L+LS  +   TVE++  M  V Y+S VGSL+
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  120 bits (301), Expect = 4e-25
 Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+EEIYM QP        E  V   + +L+  +            FM+S  + R+ +D
Sbjct: 926  GELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFD 985

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K   G  IYLLLYVDDMLI  KS   I  LK QL+S+F +KDLG AK+ILGMEI
Sbjct: 986  SCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEI 1044

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHF---AAFCSYIFED 510
             RDR +  + L+Q+ Y++K+L +FN+  + K VSTP+A HF   A  C+   ED
Sbjct: 1045 TRDRNSGLLFLSQQSYIKKVLQRFNMH-DAKPVSTPIAPHFKLSALQCASTDED 1097


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  114 bits (286), Expect(2) = 5e-25
 Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
 Frame = +1

Query: 1    GDLDEEIYMTQP-GFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPY 174
            GDL+EEIYM QP GF+     ++ V     +L+  +            F+M   Y R   
Sbjct: 900  GDLEEEIYMLQPEGFEDKE-NQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNA 958

Query: 175  DPCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGME 354
            DPC YF +     ++ LLLYVDDML+   +   I++LK+QLA +F++KDLG A +ILGM+
Sbjct: 959  DPCAYFKRFGKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQ 1018

Query: 355  IERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPL 468
            I RDR   KI L+QK YL+K+L +F++Q + KS+STPL
Sbjct: 1019 IHRDRGNRKIWLSQKNYLKKILSRFSMQ-DCKSISTPL 1055



 Score = 26.6 bits (57), Expect(2) = 5e-25
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 470  PHILQLSAVISSKTVEDREYMFHVSYASTVGSLI 571
            P  L++S+ +S    E R  M  V YAS VGSL+
Sbjct: 1056 PINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLM 1089


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  117 bits (294), Expect = 3e-24
 Identities = 71/167 (42%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1    GDLDEEIYMTQPGFQSYR*GESSV*T*EVALW-FEAITETVV*AICKFMMSKAYTRNPYD 177
            G+L+E+IYM QP        E+ V   + +L+  +            FM+S+ + R+ YD
Sbjct: 694  GELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYD 753

Query: 178  PCVYFCKLPGGEYIYLLLYVDDMLITFKSNSAINKLKSQLASKFKIKDLGEAKRILGMEI 357
             CVY  K+  G  IYLLLYVDDMLI  K  S I KLK+QL+S+F++KDLG AK+ILGMEI
Sbjct: 754  SCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEI 812

Query: 358  ERDRKTSKIKLTQKGYLQKLLHKFNIQSNTKSVSTPLASHFAAFCSY 498
             R+R + K+ L+QKGY++K+L +FN+       + P+  H   +  Y
Sbjct: 813  TRERHSDKLYLSQKGYIEKVLRRFNMHD-----AKPIYVHSQIYVPY 854