BLASTX nr result
ID: Anemarrhena21_contig00052125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00052125
(266 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 85 2e-14
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 84 5e-14
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 82 1e-13
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 82 1e-13
emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis] 82 2e-13
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 82 2e-13
gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irr... 81 2e-13
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera] 81 2e-13
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 80 4e-13
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 80 5e-13
ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 80 7e-13
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 80 7e-13
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 80 7e-13
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 80 7e-13
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 79 9e-13
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 79 1e-12
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 79 1e-12
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 79 1e-12
ref|XP_006827235.2| PREDICTED: DNA ligase 1 [Amborella trichopoda] 79 2e-12
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 79 2e-12
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 84.7 bits (208), Expect = 2e-14
Identities = 37/74 (50%), Positives = 59/74 (79%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI L+K++ +H+R KHID++YH IR+ +I+D + ++KIST+KNP D+ TK +
Sbjct: 1281 IFCDSQSAIALSKNNVHHERTKHIDVKYHFIRE-IISDGTVEVLKISTEKNPADIFTKVL 1339
Query: 186 PVEKFRSSLNFIHI 227
V KF+++LN + +
Sbjct: 1340 AVSKFQAALNLLRV 1353
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 83.6 bits (205), Expect = 5e-14
Identities = 37/74 (50%), Positives = 59/74 (79%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI L+K++ +H+R KHID+++H IR+ +I D + + KIST+KNP D+ TK +
Sbjct: 1288 IFCDSQSAIALSKNNVHHERTKHIDVKFHFIRE-IIADGKVEVSKISTEKNPADIFTKVL 1346
Query: 186 PVEKFRSSLNFIHI 227
PV KF+++L+F+ +
Sbjct: 1347 PVNKFQTALDFLRV 1360
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI+LTKD +H+R KHID++YH +R VI + + + KIST NP DMMTK I
Sbjct: 1259 LHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRD-VIEEGKLKVCKISTHDNPADMMTKPI 1317
Query: 186 PVEKFRSSLNFIHILQ 233
PV KF + + +++
Sbjct: 1318 PVAKFELCSSLVGLIE 1333
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI+LTKD +H+R KHID++YH +R VI + + + KIST NP DMMTK I
Sbjct: 1259 LHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRD-VIEEGKLKVCKISTHDNPADMMTKPI 1317
Query: 186 PVEKFRSSLNFIHILQ 233
PV KF + + +++
Sbjct: 1318 PVAKFELCSSLVGLIE 1333
>emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
Length = 1655
Score = 81.6 bits (200), Expect = 2e-13
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI+LTKD +H+R KHID++YH I Q VI+ + + KIST NP DMMTK++
Sbjct: 1581 MFCDSQSAIYLTKDQMFHERTKHIDVKYHYI-QDVISQGNVKVCKISTYDNPADMMTKSV 1639
Query: 186 PVEKFRSSLNFIHI 227
P+ KF N + +
Sbjct: 1640 PITKFELCSNLVGV 1653
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 81.6 bits (200), Expect = 2e-13
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
+YCDSQSAI L+K+ YH R KHID+RYH IR+ +++D+ + ++KIST +NP DM+TK +
Sbjct: 1253 VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIRE-MVDDESLKVLKISTNENPADMLTKVV 1311
Query: 186 PVEKF 200
P KF
Sbjct: 1312 PRNKF 1316
>gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irregularis DAOM
197198w]
Length = 103
Score = 81.3 bits (199), Expect = 2e-13
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI+LTKD +H+R KHID+RYH IR VI+ I + KIST NP DMMTK +
Sbjct: 29 IFCDSQSAIYLTKDQMFHERTKHIDVRYHFIRD-VISKGDIQVQKISTHDNPADMMTKPV 87
Query: 186 PVEKF 200
P KF
Sbjct: 88 PATKF 92
>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
Length = 215
Score = 81.3 bits (199), Expect = 2e-13
Identities = 36/74 (48%), Positives = 55/74 (74%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
+YCDSQSAI+L K+ YH R KHID+R+HKI++ V + +++ L K+ T +N DM+TK +
Sbjct: 140 LYCDSQSAIYLAKNQVYHARTKHIDVRFHKIKELVSSGELL-LEKVHTSENAADMLTKPV 198
Query: 186 PVEKFRSSLNFIHI 227
+EKF+ LN I++
Sbjct: 199 TIEKFKHCLNLINV 212
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 80.5 bits (197), Expect = 4e-13
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI+LTKD +H+R KHID++YH +R VI + + + KI T NP DMMTK I
Sbjct: 1261 LHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRD-VIEEGKLKVCKICTHDNPADMMTKPI 1319
Query: 186 PVEKFRSSLNFIHILQ 233
PV KF + + +++
Sbjct: 1320 PVAKFELCSSLVGLIE 1335
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 80.1 bits (196), Expect = 5e-13
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI LTKD +H+R KHID+RYH IR VI + + + KIST NP DMMTK +
Sbjct: 1064 IFCDSQSAICLTKDQMFHERTKHIDVRYHFIRS-VITEGDVKVCKISTHDNPADMMTKPV 1122
Query: 186 PVEKF 200
P KF
Sbjct: 1123 PATKF 1127
>ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104588258
[Nelumbo nucifera]
Length = 2014
Score = 79.7 bits (195), Expect = 7e-13
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
IYCDSQSAIHLT D +H+R KHID+RYH + ++ D + + KI++ +NP DM+TK +
Sbjct: 1338 IYCDSQSAIHLTHDQMFHERTKHIDVRYHFVHD-IVEDGRVLVNKIASAENPVDMLTKPL 1396
Query: 186 PVEKFRSSLNFI 221
P KF + +N +
Sbjct: 1397 PSSKFDACINLV 1408
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 79.7 bits (195), Expect = 7e-13
Identities = 37/74 (50%), Positives = 53/74 (71%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSA+ LTK+ +H+R KHID+R+H IR + ++N+ KISTK NP DM+TK I
Sbjct: 864 VFCDSQSALCLTKNQGFHERTKHIDVRFHFIRD-IAEQGLVNVSKISTKDNPADMLTKPI 922
Query: 186 PVEKFRSSLNFIHI 227
KF+ LN I++
Sbjct: 923 SKVKFKQCLNLINV 936
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 79.7 bits (195), Expect = 7e-13
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI LTKD +H+R KHID++YH +R V K + + KIST NP DMMTK +
Sbjct: 219 LFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVAQGK-LKVCKISTHDNPADMMTKPV 277
Query: 186 PVEKFRSSLNFIHIL 230
PV KF + + I+
Sbjct: 278 PVAKFELCSSLVGIV 292
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 79.7 bits (195), Expect = 7e-13
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI L K+ YH+R KHID++YH IR ++N+ + ++KI T+ NP D+ TK +
Sbjct: 1062 IHCDSQSAIALAKNAVYHERTKHIDVKYHFIRD-LVNNGEVQVLKIDTEDNPADIFTKVL 1120
Query: 186 PVEKFRSSLNFIHILQ 233
PV KF+ +L + + Q
Sbjct: 1121 PVSKFQDALELLRVSQ 1136
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 79.3 bits (194), Expect = 9e-13
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI LTKD +H+R KHID++YH +R V K + + KIST NP DMMTK +
Sbjct: 1101 LFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVAQGK-LKVCKISTHDNPVDMMTKHV 1159
Query: 186 PVEKFRSSLNFIHIL 230
PV KF + + I+
Sbjct: 1160 PVAKFELCSSLVGIV 1174
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/75 (52%), Positives = 51/75 (68%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI LTK+ +H+R KHIDMRYH IR VI + + + KIST NP DMMTK +
Sbjct: 933 IFCDSQSAICLTKNQMFHERTKHIDMRYHFIR-GVIAEGDVKVCKISTHDNPADMMTKPV 991
Query: 186 PVEKFRSSLNFIHIL 230
P KF + + ++
Sbjct: 992 PATKFELCSSLVGVI 1006
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI LTKD +H+R KHID+RYH IR VI + + + KIST NP DMMTK +
Sbjct: 1167 IFCDSQSAICLTKDQMFHERTKHIDLRYHFIR-GVIAEGDVKVCKISTHDNPVDMMTKPV 1225
Query: 186 PVEKF 200
P KF
Sbjct: 1226 PATKF 1230
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 79.0 bits (193), Expect = 1e-12
Identities = 37/74 (50%), Positives = 55/74 (74%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI L+K++ +H R KHID++YHKIR+ VI D V+ + KI T N D+ TK +
Sbjct: 1155 IFCDSQSAIALSKNNVHHDRTKHIDIKYHKIRE-VIADGVVEVKKICTLVNSADIFTKVV 1213
Query: 186 PVEKFRSSLNFIHI 227
PV KF+++L+ + +
Sbjct: 1214 PVSKFKTALHSLRV 1227
>ref|XP_006827235.2| PREDICTED: DNA ligase 1 [Amborella trichopoda]
Length = 480
Score = 78.6 bits (192), Expect = 2e-12
Identities = 36/76 (47%), Positives = 57/76 (75%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
++CDSQSAI+LTK+ +H R K+ID+RYHKI++ V+ + +I L KI T +NP +++TK +
Sbjct: 44 LHCDSQSAINLTKNQVFHTRTKYIDLRYHKIKELVL-EGIIYLKKIHTNENPANILTKLV 102
Query: 186 PVEKFRSSLNFIHILQ 233
EKF+ L+ ++I Q
Sbjct: 103 TTEKFKLCLDLLNICQ 118
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3
Query: 6 IYCDSQSAIHLTKDHQYHKRKKHIDMRYHKIRQWVINDKVINLVKISTKKNPTDMMTKTI 185
I+CDSQSAI LTKD +H+R KHID+RYH IR VI + + + KIST NP DMMTK +
Sbjct: 1107 IFCDSQSAICLTKDQMFHERTKHIDVRYHFIR-GVIAEGDVKVCKISTHDNPADMMTKPV 1165
Query: 186 PVEKF 200
P KF
Sbjct: 1166 PATKF 1170