BLASTX nr result
ID: Anemarrhena21_contig00051543
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00051543
(254 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94801.1| RNA polymerase beta' subunit (chloroplast) [Anema... 168 1e-39
gb|AAZ03984.1| RNA polymerase beta'' chain [Yucca schidigera] 158 1e-36
gb|AEZ49481.1| RNA polymerase beta'' subunit, partial [Hesperalo... 158 1e-36
gb|AEX94806.1| RNA polymerase beta' subunit (chloroplast) [Polia... 158 1e-36
gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfr... 158 1e-36
gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) ... 158 1e-36
gb|AEX94840.1| RNA polymerase beta' subunit (chloroplast) [Diche... 158 2e-36
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 158 2e-36
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio... 158 2e-36
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 158 2e-36
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl... 158 2e-36
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc... 156 4e-36
gb|AEX94802.1| RNA polymerase beta' subunit (chloroplast) [Camas... 156 4e-36
gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) ... 156 4e-36
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial [Nolina at... 155 8e-36
gb|AEX94838.1| RNA polymerase beta' subunit (chloroplast) [Brodi... 155 8e-36
ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cy... 155 1e-35
gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanth... 155 1e-35
gb|AEX94839.1| RNA polymerase beta' subunit (chloroplast) [Diche... 155 1e-35
gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Erios... 155 1e-35
>gb|AEX94801.1| RNA polymerase beta' subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 1384
Score = 168 bits (426), Expect = 1e-39
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGSLEEVHAS VEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN
Sbjct: 838 LVLNWDQEKNGSLEEVHASVVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 897
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFYFKMKIPLVTQHQE
Sbjct: 898 GLDRTNINPFYFKMKIPLVTQHQE 921
>gb|AAZ03984.1| RNA polymerase beta'' chain [Yucca schidigera]
Length = 1384
Score = 158 bits (400), Expect = 1e-36
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 838 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 897
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 898 GLDRTNINPFYSKGKIPLVTQHQE 921
>gb|AEZ49481.1| RNA polymerase beta'' subunit, partial [Hesperaloe parviflora]
Length = 1384
Score = 158 bits (400), Expect = 1e-36
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 838 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 897
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 898 GLDRTNINPFYSKGKIPLVTQHQE 921
>gb|AEX94806.1| RNA polymerase beta' subunit (chloroplast) [Polianthes sp. Pires
2011-05]
Length = 1384
Score = 158 bits (400), Expect = 1e-36
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 838 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 897
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 898 GLDRTNINPFYSKGKIPLVTQHQE 921
>gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfreda virginica]
Length = 1384
Score = 158 bits (400), Expect = 1e-36
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 838 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 897
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 898 GLDRTNINPFYSKGKIPLVTQHQE 921
>gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) [Agave attenuata]
Length = 761
Score = 158 bits (400), Expect = 1e-36
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 299 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 358
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 359 GLDRTNINPFYSKGKIPLVTQHQE 382
>gb|AEX94840.1| RNA polymerase beta' subunit (chloroplast) [Dichelostemma congestum]
gi|372482392|gb|AEX94841.1| RNA polymerase beta' subunit
(chloroplast) [Dichelostemma ida-maia]
Length = 1382
Score = 158 bits (399), Expect = 2e-36
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI NN
Sbjct: 836 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPNN 895
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K +IPLVTQHQ
Sbjct: 896 GLDRTNINPFYSKARIPLVTQHQ 918
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 158 bits (399), Expect = 2e-36
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 841 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 900
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVTQHQ
Sbjct: 901 GLDRTNINPFYSKVKIPLVTQHQ 923
>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
Length = 1381
Score = 158 bits (399), Expect = 2e-36
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 837 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 896
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVTQHQ
Sbjct: 897 GLDRTNINPFYSKVKIPLVTQHQ 919
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 158 bits (399), Expect = 2e-36
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 841 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 900
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVTQHQ
Sbjct: 901 GLDRTNINPFYSKVKIPLVTQHQ 923
>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
Length = 1385
Score = 158 bits (399), Expect = 2e-36
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 841 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 900
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVTQHQ
Sbjct: 901 GLDRTNINPFYSKVKIPLVTQHQ 923
>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
Length = 1385
Score = 156 bits (395), Expect = 4e-36
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 841 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 900
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVT+HQ
Sbjct: 901 GLDRTNINPFYSKVKIPLVTKHQ 923
>gb|AEX94802.1| RNA polymerase beta' subunit (chloroplast) [Camassia scilloides]
Length = 1385
Score = 156 bits (395), Expect = 4e-36
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIR+FIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 836 LVLNWDQEKNGSIEEVHASFVEVRANDLIRNFIRIELVKSTISYTGKRYDTAGSGLIPDN 895
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 896 GLDRTNINPFYSKGKIPLVTQHQE 919
>gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) [Beaucarnea
recurvata]
Length = 830
Score = 156 bits (395), Expect = 4e-36
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI +N
Sbjct: 366 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN 425
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVT+HQ
Sbjct: 426 GLDRTNINPFYSKVKIPLVTKHQ 448
>gb|AEZ49490.1| RNA polymerase beta'' subunit, partial [Nolina atopocarpa]
Length = 1385
Score = 155 bits (393), Expect = 8e-36
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYD AGSGLI +N
Sbjct: 841 LVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDMAGSGLIPDN 900
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K+KIPLVTQHQ
Sbjct: 901 GLDRTNINPFYSKVKIPLVTQHQ 923
>gb|AEX94838.1| RNA polymerase beta' subunit (chloroplast) [Brodiaea californica]
Length = 1382
Score = 155 bits (393), Expect = 8e-36
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKS ISYTGKRYDTAGSGLI NN
Sbjct: 836 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSIISYTGKRYDTAGSGLIPNN 895
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K +IPLVTQHQ
Sbjct: 896 GLDRTNINPFYSKARIPLVTQHQ 918
>ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cypripedium macranthos]
gi|578888856|gb|AHI16739.1| RNA polymerase betasubunit
(chloroplast) (chloroplast) [Cypripedium macranthos]
Length = 1380
Score = 155 bits (391), Expect = 1e-35
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYT KRYDTAGSGLI +N
Sbjct: 834 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTVKRYDTAGSGLIPDN 893
Query: 181 GLDRTNINPFYFKMKIPLVTQHQE 252
GLDRTNINPFY K KIPLVTQHQE
Sbjct: 894 GLDRTNINPFYSKGKIPLVTQHQE 917
>gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanthorrhoea preissii]
Length = 1368
Score = 155 bits (391), Expect = 1e-35
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDTAGSGLI N
Sbjct: 836 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPEN 895
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K KIPL TQHQ
Sbjct: 896 GLDRTNINPFYSKAKIPLFTQHQ 918
>gb|AEX94839.1| RNA polymerase beta' subunit (chloroplast) [Dichelostemma capitatum]
Length = 1382
Score = 155 bits (391), Expect = 1e-35
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGS+EEVHASFVEV+ANDLIRDFIRIELVKSTISYTGKRYDT GSGLI NN
Sbjct: 836 LVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISYTGKRYDTTGSGLIPNN 895
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GL RTNINPFY K KIPLVTQHQ
Sbjct: 896 GLGRTNINPFYSKAKIPLVTQHQ 918
>gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Eriospermum cervicorne]
Length = 1385
Score = 155 bits (391), Expect = 1e-35
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = +1
Query: 1 LVLNWDQEKNGSLEEVHASFVEVKANDLIRDFIRIELVKSTISYTGKRYDTAGSGLILNN 180
LVLNWDQEKNGSLEE HASFVE++ANDLIRDFIRIELVKSTISYTGKRYDT+GSGLI +N
Sbjct: 839 LVLNWDQEKNGSLEEAHASFVEIRANDLIRDFIRIELVKSTISYTGKRYDTSGSGLIPDN 898
Query: 181 GLDRTNINPFYFKMKIPLVTQHQ 249
GLDRTNINPFY K KIPLVTQHQ
Sbjct: 899 GLDRTNINPFYSKAKIPLVTQHQ 921