BLASTX nr result
ID: Anemarrhena21_contig00049396
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00049396
(471 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 89 3e-20
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 90 5e-20
gb|ABI34306.1| Polyprotein, putative [Solanum demissum] 80 9e-20
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 83 3e-19
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 89 3e-19
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 89 3e-19
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 89 3e-19
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola... 78 3e-19
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 88 4e-19
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 89 4e-19
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 86 7e-19
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc... 84 7e-19
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-18
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 88 1e-18
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-18
gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-18
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-18
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ... 88 1e-18
gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group] 88 1e-18
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-18
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 88.6 bits (218), Expect(2) = 3e-20
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII + TAPY PQS GL +RKNRTL EM+N+++I+SG P WGE +L AN ILNRVP S
Sbjct: 621 GIIHQTTAPYTPQSNGLAERKNRTLKEMMNALIISSGSPRNLWGETILTANKILNRVPRS 680
Query: 181 KTDNPQHQLW 210
KT + ++LW
Sbjct: 681 KTQSIPYELW 690
Score = 36.2 bits (82), Expect(2) = 3e-20
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 234 KV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
KV G LA V + + +K+G K CVF+G+ +S ACRFL
Sbjct: 701 KVWGCLAKVEVPLPKRVKIGPKIVDCVFIGYAVNSKACRFL 741
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 90.1 bits (222), Expect(2) = 5e-20
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E TAPY+PQS G+ +RKNRTL EM+N+MLI+S LP WGEA+L AN++LN+VP
Sbjct: 614 GIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEAILTANYLLNKVPKK 673
Query: 181 KTDNPQHQLW 210
K + ++LW
Sbjct: 674 KAEKTPYELW 683
Score = 33.9 bits (76), Expect(2) = 5e-20
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 219 TFDNLKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
++ L++ G LA V + + +K+G K C+F+G+ +S+A RFL
Sbjct: 689 SYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFL 734
>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
Length = 1691
Score = 79.7 bits (195), Expect(2) = 9e-20
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P S G+ +RKNRTL E+ N+MLI S P +WGEA+L A ++LNRVP+
Sbjct: 582 GIIHETTPPYSPSSNGVAERKNRTLVELTNAMLIESHAPLNFWGEAILTACYVLNRVPHK 641
Query: 181 KTDNPQHQLW 210
K+ +LW
Sbjct: 642 KSKLTPFELW 651
Score = 43.5 bits (101), Expect(2) = 9e-20
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFLDL 362
L+V G LA+VR++D + KLG K C FLG+ +S A RF +L
Sbjct: 661 LRVWGCLAFVRLMDPKITKLGKKVTTCAFLGYASNSTAYRFFNL 704
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 82.8 bits (203), Expect(2) = 3e-19
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E+T PY+P+S G+ +RKNRTL EM+N+MLI+S P WGE+LL A ++ NR+P+
Sbjct: 576 GIIHEVTPPYSPESNGVAERKNRTLKEMMNAMLISSNAPDNLWGESLLTACFLQNRIPHR 635
Query: 181 KTDNPQHQLW 210
KT ++LW
Sbjct: 636 KTGKTPYELW 645
Score = 38.9 bits (89), Expect(2) = 3e-19
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFLDL 362
L+V G LA V + D + K+GSK + C+FLG+ + S A RFL L
Sbjct: 655 LRVWGSLAKVMLPDPKKRKIGSKTSDCMFLGYAEHSAAYRFLVL 698
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 89.4 bits (220), Expect(2) = 3e-19
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N++LNRVP
Sbjct: 577 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNYVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 32.0 bits (71), Expect(2) = 3e-19
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 697
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 89.4 bits (220), Expect(2) = 3e-19
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E+T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 538 GIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 597
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 598 NKDKTPYEIW 607
Score = 32.0 bits (71), Expect(2) = 3e-19
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 617 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 658
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 89.4 bits (220), Expect(2) = 3e-19
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E+T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 577 GIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 32.0 bits (71), Expect(2) = 3e-19
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 697
>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
Length = 853
Score = 77.8 bits (190), Expect(2) = 3e-19
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P S G +RKNRTL E+ N+MLI S P +WGE +L A ++LNRVP+
Sbjct: 383 GIIHETTPPYSPSSNGAAERKNRTLVELTNAMLIESHAPLNFWGETILTACYVLNRVPHK 442
Query: 181 KTDNPQHQLW 210
K+ +LW
Sbjct: 443 KSKLTHFELW 452
Score = 43.5 bits (101), Expect(2) = 3e-19
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFLDL 362
L+V G LA+VR++D + KLG K C FLG+ +S A RF +L
Sbjct: 462 LRVWGCLAFVRLMDPKITKLGKKVTTCAFLGYASNSTAYRFFNL 505
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 87.8 bits (216), Expect(2) = 4e-19
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 577 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 33.1 bits (74), Expect(2) = 4e-19
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L++ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRIWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 697
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 89.4 bits (220), Expect(2) = 4e-19
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ KRKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 577 GIIHERTPPYSPESNGIAKRKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 31.6 bits (70), Expect(2) = 4e-19
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRTWGCLAKVNVPITKKHKLGPKTVDCVFLGYAHHSIAYRFL 697
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 86.3 bits (212), Expect(2) = 7e-19
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+PQS G+ +RKNRTL EM+N+MLI+ LP WGEA+L AN++LN+VP
Sbjct: 614 GIIHETTTPYSPQSNGVAERKNRTLKEMMNAMLISFSLPQNMWGEAILTANYLLNKVPKK 673
Query: 181 KTDNPQHQLW 210
K + ++LW
Sbjct: 674 KAEKTPYELW 683
Score = 33.9 bits (76), Expect(2) = 7e-19
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 219 TFDNLKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
++ L++ G LA V + + +K+G K C+F+G+ +S+A RFL
Sbjct: 689 SYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFL 734
>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1075
Score = 83.6 bits (205), Expect(2) = 7e-19
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+PQS G+ +RKNRTLT +VN+ML SGLP WGEAL A ++LNRVP
Sbjct: 480 GIIHETTPPYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYMWGEALYTACFVLNRVPAK 539
Query: 181 KTDNPQHQLW 210
T+ ++LW
Sbjct: 540 GTEVTPYELW 549
Score = 36.6 bits (83), Expect(2) = 7e-19
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
LKV G LA V I ++ KLG K CVF+G+ +S A RFL
Sbjct: 559 LKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQNSLAYRFL 600
>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 772 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 831
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 832 NKDKTPYEIW 841
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 851 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 892
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 577 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 697
>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 1062 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 1121
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 1122 NKDKTPYEIW 1131
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 1141 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 1182
>gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 863 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 922
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 923 NKDKTPYEIW 932
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 942 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 983
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 793 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 852
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 853 NKDKTPYEIW 862
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 872 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 913
>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 577 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 697
>gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1433
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 577 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 636
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 637 NKDKTPYEIW 646
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 656 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 697
>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1397
Score = 87.8 bits (216), Expect(2) = 1e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 1 GIIAEITAPYAPQSMGLQKRKNRTLTEMVNSMLITSGLPTCYWGEALLLANWILNRVPYS 180
GII E T PY+P+S G+ +RKNRTLT++VN+ML T+GLP +WGEALL +N +LNRVP
Sbjct: 654 GIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNR 713
Query: 181 KTDNPQHQLW 210
D +++W
Sbjct: 714 NKDKTPYEIW 723
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 231 LKV*G*LAYVRILDIRGLKLGSKANKCVFLGFVDDSDACRFL 356
L+ G LA V + + KLG K CVFLG+ S A RFL
Sbjct: 733 LRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFL 774