BLASTX nr result

ID: Anemarrhena21_contig00049148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00049148
         (301 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011629152.1| PREDICTED: probable RNA 3'-terminal phosphat...    70   6e-10
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     60   4e-07
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    59   1e-06
gb|AJE29370.1| putative gag protein [Coffea canephora]                 59   2e-06
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]    58   3e-06
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]         57   6e-06

>ref|XP_011629152.1| PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein
           [Amborella trichopoda]
          Length = 364

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -3

Query: 191 SMTKFEVEIFNGKRNFSSWQKKVKTLLVQQSLHKTLQRHSAKPAGMSNEDREEMDLKVAN 12
           S  KFEVE F+GK NF  WQ  V+ LLVQQ LHK L+  S KP  +SNED EE+ L+  +
Sbjct: 6   SNEKFEVEKFDGKNNFGIWQINVRDLLVQQDLHKALKGKSKKPESISNEDWEELHLRAMS 65

Query: 11  TIQ 3
           TI+
Sbjct: 66  TIR 68


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 191 SMTKFEVEIFNG-KRNFSSWQKKVKTLLVQQSLHKTLQRHSAKPAGMSNEDREEMDLKVA 15
           S  K+EV  FNG K  FS WQ+++K LL+QQ LHK L   S KP  M  ED EE+D K A
Sbjct: 2   SGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAA 61

Query: 14  NTIQ 3
           + I+
Sbjct: 62  SAIR 65


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease [Nicotiana tabacum]
           gi|20045|emb|CAA32025.1| unnamed protein product
           [Nicotiana tabacum]
          Length = 1328

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = -3

Query: 191 SMTKFEVEIFNGKRNFSSWQKKVKTLLVQQSLHKTLQRHSAKPAGMSNEDREEMDLKVAN 12
           S  K+EV  FNG   FS+WQ++++ LL+QQ LHK L   S KP  M  ED  ++D + A+
Sbjct: 2   SGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAAS 61

Query: 11  TIQ 3
            I+
Sbjct: 62  AIR 64


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 44/66 (66%)
 Frame = -3

Query: 200 IGSSMTKFEVEIFNGKRNFSSWQKKVKTLLVQQSLHKTLQRHSAKPAGMSNEDREEMDLK 21
           +G    +F ++ FNG  +F+ WQ++VK +LVQQ L K L   + KP  M++++ EE+D +
Sbjct: 1   MGFGTIQFPIQPFNGTTSFTLWQRRVKDVLVQQGLAKALNGKNKKPESMNDDEFEELDAR 60

Query: 20  VANTIQ 3
            A+TI+
Sbjct: 61  CASTIR 66


>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
          Length = 127

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = -3

Query: 197 GSSMTKFEVEIFNGKRNFSSWQKKVKTLLVQQSLHKTLQRHSAKPAGMSNEDREEMDLKV 18
           G S  KF+V  F+G  NF  WQ++VK LLVQQ + K L  +  +P GM+N D +++++KV
Sbjct: 3   GISSAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKAL--YGKQPEGMNNMDWKDLEVKV 60

Query: 17  ANTIQ 3
           A TI+
Sbjct: 61  AATIR 65


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -3

Query: 218 KSNVLKIGSSMTKFEVEIFNGKRNFSSWQKKVKTLLVQQSLHKTLQRHSAKPAGMSNEDR 39
           +S V K+  +  KF++  F+G  NF  WQ +VK LL QQ + K L+    KPA M ++D 
Sbjct: 77  RSRVGKLAPTCMKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALK--GVKPAKMEDDDC 134

Query: 38  EEMDLKVANTIQ 3
           EEM L+ A TI+
Sbjct: 135 EEMQLQAAATIR 146


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