BLASTX nr result
ID: Anemarrhena21_contig00049016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00049016
(448 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 64 5e-08
emb|CAN62499.1| hypothetical protein VITISV_000082 [Vitis vinifera] 63 9e-08
gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsi... 62 1e-07
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera] 62 2e-07
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 61 3e-07
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 61 3e-07
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 61 3e-07
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 59 4e-07
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 60 4e-07
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 60 4e-07
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 60 6e-07
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 60 7e-07
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 54 1e-06
gb|AAD29774.1|AF074021_6 putative polyprotein [Arabidopsis thali... 59 1e-06
emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera] 54 1e-06
ref|XP_010319967.1| PREDICTED: uncharacterized protein LOC104647... 59 2e-06
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 59 2e-06
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712... 58 2e-06
ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455... 58 2e-06
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 58 2e-06
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 63.5 bits (153), Expect = 5e-08
Identities = 28/63 (44%), Positives = 48/63 (76%)
Frame = -2
Query: 282 SLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYL 103
+L+K + +H+RTKHIDV+++ IR+ + D K +++ KI+ +KNP D+ TK +PV KF+ L
Sbjct: 1297 ALSKNNVHHERTKHIDVKFHFIREIIADGK-VEVSKISTEKNPADIFTKVLPVNKFQTAL 1355
Query: 102 NFI 94
+F+
Sbjct: 1356 DFL 1358
>emb|CAN62499.1| hypothetical protein VITISV_000082 [Vitis vinifera]
Length = 190
Score = 62.8 bits (151), Expect = 9e-08
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLN 100
LAK YH RTKHIDVR++KIR+ V +++ L K++ KN DM+TK I EKFK LN
Sbjct: 125 LAKNQVYHARTKHIDVRFHKIRELVSSGELL-LEKVHTSKNATDMLTKPITTEKFKHCLN 183
Query: 99 FIH 91
++
Sbjct: 184 LVN 186
>gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsis thaliana]
gi|7267201|emb|CAB77912.1| putative transposon protein
[Arabidopsis thaliana]
Length = 570
Score = 62.0 bits (149), Expect = 1e-07
Identities = 28/56 (50%), Positives = 45/56 (80%)
Frame = -2
Query: 282 SLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKF 115
SL+K++ +H+RTKHI V+Y+ IR V++N ++++KI+ +NP DM+TK IPV+KF
Sbjct: 516 SLSKKNMFHERTKHIAVKYHFIRD-VIENGDVEVLKIHTSQNPADMLTKVIPVQKF 570
>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
Length = 215
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Frame = -2
Query: 297 QLKCYS-----LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKT 133
QL C S LAK YH RTKHIDVR++KI++ V +++ L K++ +N DM+TK
Sbjct: 139 QLYCDSQSAIYLAKNQVYHARTKHIDVRFHKIKELVSSGELL-LEKVHTSENAADMLTKP 197
Query: 132 IPVEKFKVYLNFIH 91
+ +EKFK LN I+
Sbjct: 198 VTIEKFKHCLNLIN 211
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLN 100
L+K YH+RTKHIDVR+ IR VV++ +D++KI+ +NP D +TK IPV KFK L
Sbjct: 1290 LSKNSVYHERTKHIDVRFNYIRD-VVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALG 1348
Query: 99 FIHFLE 82
+ ++
Sbjct: 1349 VLKLMK 1354
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 61.2 bits (147), Expect = 3e-07
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = -2
Query: 282 SLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYL 103
+L+K + +H+RTKHIDVRY IR ++ N D+VKI+ +KNP D+ TK +PV KF+ L
Sbjct: 1267 ALSKNNVHHERTKHIDVRYQYIRD-IIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAAL 1325
Query: 102 NFI 94
+
Sbjct: 1326 TLL 1328
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 60.8 bits (146), Expect = 3e-07
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKV 109
L+K YH RTKHIDVRY+ IR+ +VD++ + ++KI+ +NP DM+TK +P KF++
Sbjct: 1263 LSKNSMYHARTKHIDVRYHWIRE-MVDDESLKVLKISTNENPADMLTKVVPRNKFEL 1318
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 59.3 bits (142), Expect(2) = 4e-07
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -2
Query: 261 YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLNFI 94
+H+RTKHIDV+Y IR V+D K + L+KI ++NP DM+TK +P KF + +N +
Sbjct: 1128 FHRRTKHIDVKYNFIRN-VIDQKELTLMKIRTEENPSDMLTKPLPTTKFILCVNLV 1182
Score = 21.2 bits (43), Expect(2) = 4e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 314 VGVYCNN*SAIHLLK 270
V V+C++ SAIHL K
Sbjct: 1109 VSVFCDSQSAIHLDK 1123
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 60.5 bits (145), Expect = 4e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLN 100
L K +H+RTKH++VRY+ IR+ +V ++ + L KI++ NP DM TK +PV KF YL+
Sbjct: 1782 LCKNXVFHERTKHVNVRYHFIRE-IVSSRKMKLEKISLADNPIDMATKVLPVRKFXYYLD 1840
Query: 99 FI 94
+
Sbjct: 1841 LV 1842
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 60.5 bits (145), Expect = 4e-07
Identities = 26/63 (41%), Positives = 47/63 (74%)
Frame = -2
Query: 282 SLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYL 103
+L+K + +H+RTKHIDV+Y+ IR+ ++ + ++++KI+ +KNP D+ TK + V KF+ L
Sbjct: 1290 ALSKNNVHHERTKHIDVKYHFIRE-IISDGTVEVLKISTEKNPADIFTKVLAVSKFQAAL 1348
Query: 102 NFI 94
N +
Sbjct: 1349 NLL 1351
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = -2
Query: 333 EKIRLLSWGLLQQLKCYSLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNP 154
E+ ++ W Q C L+K +H+RTKHIDVRY IR VV+ +D++KI+ +NP
Sbjct: 505 EQDKVTLWCDSQSAIC--LSKNSTHHERTKHIDVRYNFIRD-VVEAGDVDVLKIHTSRNP 561
Query: 153 RDMMTKTIPVEKFKVYLNFIHFLE 82
D +TK+IPV KF+ L + ++
Sbjct: 562 ADALTKSIPVNKFQSALELLKLVK 585
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 59.7 bits (143), Expect = 7e-07
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = -2
Query: 282 SLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYL 103
+LAK YH+RTKHIDV+Y+ IR +V+N + ++KI+ + NP D+ TK +PV KF+ L
Sbjct: 1071 ALAKNAVYHERTKHIDVKYHFIRD-LVNNGEVQVLKIDTEDNPADIFTKVLPVSKFQDAL 1129
Query: 102 NFI 94
+
Sbjct: 1130 ELL 1132
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 54.3 bits (129), Expect(2) = 1e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLN 100
LAK +H+R+KHIDVR + +R + + I + K++ K NP DM+TK++ V KFK LN
Sbjct: 1143 LAKNQSFHERSKHIDVRLHFVRDIIAAGE-IGVGKVHTKDNPSDMLTKSLNVTKFKHCLN 1201
Query: 99 FIH 91
I+
Sbjct: 1202 LIN 1204
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 314 VGVYCNN*SAIHLLK 270
V VYC+N SAIHL K
Sbjct: 1131 VVVYCDNQSAIHLAK 1145
>gb|AAD29774.1|AF074021_6 putative polyprotein [Arabidopsis thaliana]
gi|7267218|emb|CAB80825.1| putative polyprotein
[Arabidopsis thaliana]
Length = 922
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/65 (40%), Positives = 46/65 (70%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLN 100
++K + +H+RTKHIDV++Y IR +++ +++ KI+ +NP DM+TK IP+ KF+ L+
Sbjct: 858 MSKNNAFHERTKHIDVKFYFIRD-IIEAGEVEVEKIHTSRNPVDMLTKVIPLHKFEAALD 916
Query: 99 FIHFL 85
+ L
Sbjct: 917 HLKLL 921
>emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera]
Length = 104
Score = 54.3 bits (129), Expect(2) = 1e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLN 100
LAK +H+R KHIDVR + +R ++ K I + KI+I+ NP DM+TK++ V KF LN
Sbjct: 39 LAKNQSFHERFKHIDVRLHFVRDIIIAGK-IGVGKIHIEDNPSDMLTKSLNVTKFNHCLN 97
Query: 99 FIH 91
++
Sbjct: 98 LVN 100
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 314 VGVYCNN*SAIHLLK 270
V VYC+N SAIHL K
Sbjct: 27 VVVYCDNQSAIHLAK 41
>ref|XP_010319967.1| PREDICTED: uncharacterized protein LOC104647090 [Solanum
lycopersicum]
Length = 251
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -2
Query: 279 LAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKV 109
L+K YH RTKHID+RY+ IR+ V++ + + KI+ +NP DM+TK IP +KFK+
Sbjct: 186 LSKNSKYHARTKHIDIRYHWIRE-KVESNLFHVKKIHTSENPVDMLTKKIPKDKFKL 241
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = -2
Query: 282 SLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYL 103
+L+K +H+RTKHIDVRY+ IR+ + D + I +VKI+ NP D+ TKT+PV K + L
Sbjct: 1276 ALSKNSVHHERTKHIDVRYHFIREKIADGE-IQVVKISTTWNPADIFTKTVPVSKLQEAL 1334
Query: 102 NFI 94
+
Sbjct: 1335 KLL 1337
>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix dactylifera]
Length = 2199
Score = 58.2 bits (139), Expect = 2e-06
Identities = 28/74 (37%), Positives = 47/74 (63%)
Frame = -2
Query: 261 YHKRTKHIDVRYYKIRQ*VVDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLNFIHFLE 82
YH RT HID+RY+KIR+ V + +++ LVK++ KKN D +TKT+P + F + + ++
Sbjct: 1374 YHARTNHIDMRYHKIRELVEEGEVM-LVKVHTKKNQSDALTKTLPRDSFLSCVGLMGLMD 1432
Query: 81 R*SGEGAFERESSE 40
+ GA E + +
Sbjct: 1433 QVELAGALEHQGGD 1446
>ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455257 [Malus domestica]
Length = 253
Score = 58.2 bits (139), Expect = 2e-06
Identities = 35/91 (38%), Positives = 49/91 (53%)
Frame = -2
Query: 360 QDDHNQV*CEKIRLLSWGLLQQLKCYSLAKRH*YHKRTKHIDVRYYKIRQ*VVDNKMIDL 181
Q DH V C+ + LAK +H RTKHIDVR++ +R+ ++D+ I L
Sbjct: 171 QQDHVNVHCDSQSAIH-----------LAKNQVHHARTKHIDVRFHFVRE-IIDDGDILL 218
Query: 180 VKINIKKNPRDMMTKTIPVEKFKVYLNFIHF 88
KI NP DM+TK + + KFK L+ I F
Sbjct: 219 QKIETADNPADMLTKPVSLHKFKHCLDLIDF 249
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Frame = -2
Query: 336 CEKIRLLSW--GLLQQLK----CYSL----------AKRH*YHKRTKHIDVRYYKIRQ*V 205
CE + L W GL +L C SL K +H+RTKHID++Y+ +R V
Sbjct: 1234 CEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRD-V 1292
Query: 204 VDNKMIDLVKINIKKNPRDMMTKTIPVEKFKVYLNFIHFLE 82
++ + + KI+ NP DMMTK IPV KF++ + + +E
Sbjct: 1293 IEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLVGLIE 1333