BLASTX nr result
ID: Anemarrhena21_contig00047963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00047963
(220 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX94887.1| retrotransposon protein, putative, Ty1-copia sub-... 85 3e-19
gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [O... 83 7e-19
gb|ABF97186.1| retrotransposon protein, putative, unclassified [... 83 7e-19
ref|XP_002447687.1| hypothetical protein SORBIDRAFT_06g013016 [S... 83 8e-19
gb|AEJ07899.1| Opie3 putative pol protein [Zea mays subsp. mexic... 80 1e-18
emb|CAE02142.1| OSJNBa0069D17.3 [Oryza sativa Japonica Group] 82 1e-18
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays] 84 2e-18
gb|ABA97697.1| retrotransposon protein, putative, unclassified [... 82 2e-18
gb|ABF95221.1| retrotransposon protein, putative, unclassified [... 84 2e-18
gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays] 81 2e-18
emb|CAD40009.3| OSJNBb0052B05.12 [Oryza sativa Japonica Group] 81 2e-18
gb|ABA93936.1| retrotransposon protein, putative, unclassified, ... 82 2e-18
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera] 81 3e-18
emb|CAN72692.1| hypothetical protein VITISV_040443 [Vitis vinifera] 81 3e-18
gb|AAK53851.1|AC016781_5 Putative copia-like retroelement [Oryza... 79 4e-18
ref|XP_009881815.1| PREDICTED: uncharacterized protein LOC104285... 80 5e-18
gb|AAP53333.2| retrotransposon protein, putative, unclassified, ... 82 5e-18
gb|AAL58177.1|AC093181_23 putative polyprotein [Oryza sativa Jap... 82 5e-18
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 81 6e-18
gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays] 80 6e-18
>gb|AAX94887.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550139|gb|ABA92936.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1718
Score = 84.7 bits (208), Expect(2) = 3e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFLR LVSWSSKKQNS+ALSTAEAEYVAA +CCAQ+LWMK TL
Sbjct: 1060 TCQFLRQSLVSWSSKKQNSIALSTAEAEYVAADSCCAQLLWMKQTL 1105
Score = 37.0 bits (84), Expect(2) = 3e-19
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 211 DLTMISYSDADHVRCRVDRKSTSGLVNF 128
D ++ YSD+D+ C+VDRKST+G F
Sbjct: 1036 DFELLGYSDSDYAGCKVDRKSTTGTCQF 1063
>gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [Oryza sativa Japonica Group]
Length = 1778
Score = 83.2 bits (204), Expect(2) = 7e-19
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNS+ALST EAEYVAAG+CCAQ+LWMK TL
Sbjct: 1473 TCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCAQLLWMKQTL 1518
Score = 37.0 bits (84), Expect(2) = 7e-19
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 211 DLTMISYSDADHVRCRVDRKSTSGLVNF 128
D ++ YSD+D+ C+VDRKST+G F
Sbjct: 1449 DFELLGYSDSDYAGCKVDRKSTTGTCQF 1476
>gb|ABF97186.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1759
Score = 83.2 bits (204), Expect(2) = 7e-19
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNS+ALST EAEYVAAG+CCAQ+LWMK TL
Sbjct: 1473 TCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCAQLLWMKQTL 1518
Score = 37.0 bits (84), Expect(2) = 7e-19
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 211 DLTMISYSDADHVRCRVDRKSTSGLVNF 128
D ++ YSD+D+ C+VDRKST+G F
Sbjct: 1449 DFELLGYSDSDYAGCKVDRKSTTGTCQF 1476
>ref|XP_002447687.1| hypothetical protein SORBIDRAFT_06g013016 [Sorghum bicolor]
gi|241938870|gb|EES12015.1| hypothetical protein
SORBIDRAFT_06g013016, partial [Sorghum bicolor]
Length = 319
Score = 82.8 bits (203), Expect(2) = 8e-19
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQN VALSTAEAEY+AAGACCAQ+LWM+ TL
Sbjct: 202 TCQFLGRSLVSWSSKKQNCVALSTAEAEYIAAGACCAQLLWMRQTL 247
Score = 37.4 bits (85), Expect(2) = 8e-19
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K + ++ YSD+D+ C+VDRKSTSG F
Sbjct: 175 KGSKFNLLGYSDSDYAGCKVDRKSTSGTCQF 205
>gb|AEJ07899.1| Opie3 putative pol protein [Zea mays subsp. mexicana]
Length = 1048
Score = 79.7 bits (195), Expect(2) = 1e-18
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSW+SKKQ SVALSTAEAEYVAAG CCAQ+LWM+ TL
Sbjct: 912 TCQFLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTL 957
Score = 40.0 bits (92), Expect(2) = 1e-18
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K + ++ YSD+D+ RC+VDRKSTSG F
Sbjct: 885 KGSTFDLVGYSDSDYARCKVDRKSTSGTCQF 915
>emb|CAE02142.1| OSJNBa0069D17.3 [Oryza sativa Japonica Group]
Length = 1156
Score = 82.4 bits (202), Expect(2) = 1e-18
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWS KKQNS+ALSTAEAEYVAAG+CCAQ+LWMK TL
Sbjct: 1020 TCQFLGRSLVSWSFKKQNSIALSTAEAEYVAAGSCCAQLLWMKQTL 1065
Score = 37.0 bits (84), Expect(2) = 1e-18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 211 DLTMISYSDADHVRCRVDRKSTSGLVNF 128
D ++ YSD+D+ C+VDRKST+G F
Sbjct: 996 DFKLLGYSDSDYAGCKVDRKSTTGTCQF 1023
>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
Length = 2319
Score = 84.0 bits (206), Expect(2) = 2e-18
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQN VALSTAEAEY+AAGACCAQ+LWMK TL
Sbjct: 1686 TCQFLGRSLVSWSSKKQNCVALSTAEAEYIAAGACCAQLLWMKQTL 1731
Score = 35.0 bits (79), Expect(2) = 2e-18
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 202 MISYSDADHVRCRVDRKSTSGLVNF 128
++ YSD+D+ C+VDRKST+G F
Sbjct: 1665 LLGYSDSDYAGCKVDRKSTTGTCQF 1689
>gb|ABA97697.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1639
Score = 82.4 bits (202), Expect(2) = 2e-18
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNS+ALS AEAEYVAAG+CCAQ+LWMK TL
Sbjct: 1503 TCQFLGRSLVSWSSKKQNSIALSIAEAEYVAAGSCCAQLLWMKQTL 1548
Score = 36.6 bits (83), Expect(2) = 2e-18
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K D ++ YSD+D+ C+VDRKST+G F
Sbjct: 1476 KCVDQKLLGYSDSDYAGCKVDRKSTTGTCQF 1506
>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2111
Score = 83.6 bits (205), Expect(2) = 2e-18
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNS+ALSTAEAEYVAAG+CCAQ+LWM+ TL
Sbjct: 1431 TCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCAQLLWMRQTL 1476
Score = 35.0 bits (79), Expect(2) = 2e-18
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 202 MISYSDADHVRCRVDRKSTSGLVNF 128
++ YSD+D+ C+VDRKST+G F
Sbjct: 1410 LLGYSDSDYAGCKVDRKSTTGTCQF 1434
>gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]
Length = 1553
Score = 80.9 bits (198), Expect(2) = 2e-18
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQ SVALSTAEAEYVAAG CCAQ+LWM+ TL
Sbjct: 1417 TCQFLGRSLVSWSSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTL 1462
Score = 37.7 bits (86), Expect(2) = 2e-18
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K + +I YSD+D+ C+VDRKSTSG F
Sbjct: 1390 KGSTFDLIGYSDSDYAGCKVDRKSTSGTCQF 1420
>emb|CAD40009.3| OSJNBb0052B05.12 [Oryza sativa Japonica Group]
Length = 1549
Score = 81.3 bits (199), Expect(2) = 2e-18
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQN VALSTAEAEY++AG+CCAQ+LWMK TL
Sbjct: 1413 TCQFLGRSLVSWSSKKQNFVALSTAEAEYISAGSCCAQLLWMKQTL 1458
Score = 37.4 bits (85), Expect(2) = 2e-18
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 193 YSDADHVRCRVDRKSTSGLVNF 128
Y+DAD+ RC+VDRKSTSG F
Sbjct: 1395 YADADYARCKVDRKSTSGTCQF 1416
>gb|ABA93936.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1533
Score = 81.6 bits (200), Expect(2) = 2e-18
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQN +ALSTAEAEYVAAG+CCAQ++WMK TL
Sbjct: 1397 TCQFLGQSLVSWSSKKQNFIALSTAEAEYVAAGSCCAQLIWMKQTL 1442
Score = 37.0 bits (84), Expect(2) = 2e-18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 211 DLTMISYSDADHVRCRVDRKSTSGLVNF 128
D ++ YSD+D+ C+VDRKST+G F
Sbjct: 1373 DFELLGYSDSDYAGCKVDRKSTTGTCQF 1400
>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
Length = 334
Score = 81.3 bits (199), Expect(2) = 3e-18
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TC FL + LVSW SKKQNSVALSTAEAEY+AAG CCAQ+LWMK TL
Sbjct: 202 TCHFLGHSLVSWHSKKQNSVALSTAEAEYIAAGLCCAQILWMKQTL 247
Score = 37.0 bits (84), Expect(2) = 3e-18
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K ++ +I +SDAD CRV+RKSTSG +F
Sbjct: 175 KGDNFELIGFSDADFAGCRVERKSTSGTCHF 205
>emb|CAN72692.1| hypothetical protein VITISV_040443 [Vitis vinifera]
Length = 226
Score = 81.3 bits (199), Expect(2) = 3e-18
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TC FL + LVSW SKKQNSVALSTAEAEY+AAG CCAQ+LWMK TL
Sbjct: 125 TCHFLGHSLVSWHSKKQNSVALSTAEAEYIAAGLCCAQILWMKQTL 170
Score = 37.0 bits (84), Expect(2) = 3e-18
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K ++ +I +SDAD CRV+RKSTSG +F
Sbjct: 98 KGDNFELIGFSDADFAGCRVERKSTSGTCHF 128
>gb|AAK53851.1|AC016781_5 Putative copia-like retroelement [Oryza sativa Japonica Group]
Length = 809
Score = 79.3 bits (194), Expect(2) = 4e-18
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNSV LSTAEAEYV+A +CCAQ+LWMK TL
Sbjct: 63 TCQFLGRSLVSWSSKKQNSVTLSTAEAEYVSARSCCAQLLWMKQTL 108
Score = 38.5 bits (88), Expect(2) = 4e-18
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 202 MISYSDADHVRCRVDRKSTSGLVNF 128
+I Y+DAD+V C+VDRKSTSG F
Sbjct: 42 LIGYADADYVGCKVDRKSTSGTCQF 66
>ref|XP_009881815.1| PREDICTED: uncharacterized protein LOC104285113, partial [Charadrius
vociferus]
Length = 1477
Score = 80.5 bits (197), Expect(2) = 5e-18
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -3
Query: 137 CQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
CQFL LVSWSSKKQNSVALSTAEAEY++AG CCAQ+LWMK TL
Sbjct: 1381 CQFLGRSLVSWSSKKQNSVALSTAEAEYISAGNCCAQLLWMKQTL 1425
Score = 37.0 bits (84), Expect(2) = 5e-18
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1
Query: 202 MISYSDADHVRCRVDRKSTSGLVNF 128
+I YSD+D+ C+VDRKSTSG F
Sbjct: 1359 LIGYSDSDYAGCKVDRKSTSGCCQF 1383
>gb|AAP53333.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 880
Score = 82.4 bits (202), Expect(2) = 5e-18
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNS+ALSTAEAEYVAAG CCAQ+LWM+ TL
Sbjct: 277 TCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGFCCAQLLWMRQTL 322
Score = 35.0 bits (79), Expect(2) = 5e-18
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 202 MISYSDADHVRCRVDRKSTSGLVNF 128
++ YSD+D+ C+VDRKST+G F
Sbjct: 256 LLGYSDSDYAGCKVDRKSTTGTCQF 280
>gb|AAL58177.1|AC093181_23 putative polyprotein [Oryza sativa Japonica Group]
Length = 877
Score = 82.4 bits (202), Expect(2) = 5e-18
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSWSSKKQNS+ALSTAEAEYVAAG CCAQ+LWM+ TL
Sbjct: 277 TCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGFCCAQLLWMRQTL 322
Score = 35.0 bits (79), Expect(2) = 5e-18
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 202 MISYSDADHVRCRVDRKSTSGLVNF 128
++ YSD+D+ C+VDRKST+G F
Sbjct: 256 LLGYSDSDYAGCKVDRKSTTGTCQF 280
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 81.3 bits (199), Expect(2) = 6e-18
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TC FL + LVSW SKKQNSVALSTAEAEY+AAG CCAQ+LWMK TL
Sbjct: 1662 TCHFLGHSLVSWHSKKQNSVALSTAEAEYIAAGLCCAQILWMKQTL 1707
Score = 35.8 bits (81), Expect(2) = 6e-18
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -1
Query: 214 NDLTMISYSDADHVRCRVDRKSTSGLVNF 128
++ +I +SDAD CRV+RKSTSG +F
Sbjct: 1637 DNFELIGFSDADFAGCRVERKSTSGTCHF 1665
>gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays]
Length = 1657
Score = 79.7 bits (195), Expect(2) = 6e-18
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 140 TCQFLRNCLVSWSSKKQNSVALSTAEAEYVAAGACCAQVLWMKHTL 3
TCQFL LVSW+SKKQ SVALSTAEAEYVAAG CCAQ+LWM+ TL
Sbjct: 1521 TCQFLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTL 1566
Score = 37.4 bits (85), Expect(2) = 6e-18
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 220 KTNDLTMISYSDADHVRCRVDRKSTSGLVNF 128
K + ++ YSD+D+ C+VDRKSTSG F
Sbjct: 1494 KGSTFDLVGYSDSDYAGCKVDRKSTSGTCQF 1524