BLASTX nr result

ID: Anemarrhena21_contig00047258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00047258
         (723 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008810347.1| PREDICTED: pentatricopeptide repeat-containi...    49   2e-07
ref|XP_010914763.1| PREDICTED: pentatricopeptide repeat-containi...    45   3e-06

>ref|XP_008810347.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Phoenix dactylifera]
          Length = 543

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 670 HYAPDSATYSTLVEAYKKEGMTDKIFIL 587
           HY PDS TYS LV+AY+KEGMTDKI+ L
Sbjct: 501 HYTPDSTTYSILVDAYRKEGMTDKIYDL 528



 Score = 33.5 bits (75), Expect(2) = 2e-07
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 723 KAGDLMEMERVFNSMKD 673
           KAGDLMEMERVF  MKD
Sbjct: 483 KAGDLMEMERVFKRMKD 499


>ref|XP_010914763.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Elaeis guineensis]
          Length = 505

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -3

Query: 670 HYAPDSATYSTLVEAYKKEGMTDKIFIL 587
           H AP+S TYS LV+AY+KEGMTDKI+ L
Sbjct: 463 HCAPNSTTYSILVDAYRKEGMTDKIYDL 490



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 723 KAGDLMEMERVFNSMKD 673
           KAGDLMEMERVF  MKD
Sbjct: 445 KAGDLMEMERVFERMKD 461


Top