BLASTX nr result
ID: Anemarrhena21_contig00047257
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00047257
(323 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 118 3e-28
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 109 1e-26
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 106 4e-25
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 103 5e-25
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 103 5e-25
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 103 5e-25
emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera] 102 8e-25
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 103 1e-24
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 111 1e-24
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 101 1e-24
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 103 3e-24
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 103 4e-24
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 100 4e-24
gb|AFB73911.1| polyprotein [Citrus sinensis] 100 5e-24
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 99 1e-23
gb|AFB73912.1| polyprotein [Citrus sinensis] 99 1e-23
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 99 1e-23
gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus ... 101 2e-23
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 100 2e-23
emb|CAN65518.1| hypothetical protein VITISV_004207 [Vitis vinifera] 101 2e-23
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 118 bits (296), Expect(2) = 3e-28
Identities = 60/91 (65%), Positives = 75/91 (82%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDNE------QYKAKLVTKGYAQKKGVDYNEI 163
SL++NQT ELV +P+ K +GCKWVF++K+ +YKA+LV KG++Q++GVDYNEI
Sbjct: 929 SLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKGFSQREGVDYNEI 988
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSPVV+HTSIR LLAMVAH DLELEQLDVKT
Sbjct: 989 FSPVVRHTSIRVLLAMVAHFDLELEQLDVKT 1019
Score = 33.1 bits (74), Expect(2) = 3e-28
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE I M QPEG+ G+
Sbjct: 1021 FLHGELEEDILMSQPEGFVVPGK 1043
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 109 bits (272), Expect(2) = 1e-26
Identities = 52/90 (57%), Positives = 75/90 (83%), Gaps = 7/90 (7%)
Frame = +2
Query: 5 LNRNQT*ELVDLPKNSKAIGCKWVFQKKD------NEQYKAKLVTKGYAQKKGVDYNEIF 166
L++NQT +LV+ P+ +AIGCKWV++KK+ E++KA+LV KGY+Q+KGVDY+EIF
Sbjct: 187 LHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGEKFKARLVAKGYSQRKGVDYDEIF 246
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SP+V+HTSIR +L +VAH D++LEQ+DV+T
Sbjct: 247 SPMVRHTSIRTVLGLVAHFDMQLEQMDVET 276
Score = 37.4 bits (85), Expect(2) = 1e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH +LEE +YM QPEG+ Q GQ
Sbjct: 278 FLHGDLEELVYMVQPEGFIQPGQ 300
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 106 bits (264), Expect(2) = 4e-25
Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDN------EQYKAKLVTKGYAQKKGVDYNEI 163
SL++NQT +LV P K I CKWVF+KK+ +YKA++V +G+ Q++GVDYNEI
Sbjct: 816 SLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEI 875
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSPVV+HTSIR LLA+VAH +LELEQLDVKT
Sbjct: 876 FSPVVRHTSIRVLLAIVAHQNLELEQLDVKT 906
Score = 35.0 bits (79), Expect(2) = 4e-25
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QP+G+ G+
Sbjct: 908 FLHGELEEEIYMTQPDGFQVPGK 930
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 57/90 (63%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L+RN+T ELV+LPK KAIG KWV++ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 813 ALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 872
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SPVV+ T+IR +LAM A DL LEQLDVKT
Sbjct: 873 SPVVRLTTIRVVLAMCAALDLHLEQLDVKT 902
Score = 37.7 bits (86), Expect(2) = 5e-25
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QPEG+ ++G+
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGK 926
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 57/90 (63%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L+RN+T ELV+LPK KAIG KWV++ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 813 ALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 872
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SPVV+ T+IR +LAM A DL LEQLDVKT
Sbjct: 873 SPVVRLTTIRVVLAMCAALDLHLEQLDVKT 902
Score = 37.7 bits (86), Expect(2) = 5e-25
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QPEG+ ++G+
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGK 926
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 57/90 (63%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L+RN+T ELV+LPK KAIG KWV++ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 813 ALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 872
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SPVV+ T+IR +LAM A DL LEQLDVKT
Sbjct: 873 SPVVRLTTIRVVLAMCAALDLHLEQLDVKT 902
Score = 37.7 bits (86), Expect(2) = 5e-25
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QPEG+ ++G+
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGK 926
>emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]
Length = 444
Score = 102 bits (253), Expect(2) = 8e-25
Identities = 54/91 (59%), Positives = 69/91 (75%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKK------DNEQYKAKLVTKGYAQKKGVDYNEI 163
SL +N T LVD PK K +GCKWVF+KK + E++KA+LV KGY Q++GVD+NEI
Sbjct: 216 SLFQNGTRLLVDKPKGCKVVGCKWVFKKKLGIPGVEPERFKARLVAKGYTQREGVDFNEI 275
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSP VKHTSI LLA+V+ +LE+EQ+DVKT
Sbjct: 276 FSPAVKHTSIGVLLALVSLWNLEIEQMDVKT 306
Score = 38.1 bits (87), Expect(2) = 8e-25
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+I+M+QPEG+ KG+
Sbjct: 308 FLHGELEEEIFMQQPEGFIVKGK 330
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 57/90 (63%), Positives = 72/90 (80%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L+RN T ELV+LPK KAIG KWVF+ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 813 ALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 872
Query: 167 SPVVKHTSIRL-LAMVAHGDLELEQLDVKT 253
SPVV+ T+IR+ LAM A +L LEQLDVKT
Sbjct: 873 SPVVRLTTIRIVLAMCAAFELHLEQLDVKT 902
Score = 36.6 bits (83), Expect(2) = 1e-24
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQK 317
FLH ELEE+IYM QPEG+ +K
Sbjct: 904 FLHGELEEEIYMLQPEGFEEK 924
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 111 bits (278), Expect(2) = 1e-24
Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKD----NE--QYKAKLVTKGYAQKKGVDYNEI 163
SL +N+T ELV PK+ K +G KWVF++K NE +YKA+LV KG++QK+GVDYNEI
Sbjct: 796 SLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEI 855
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSPVVKH+SIR LLA VAH DLEL+QLDVKT
Sbjct: 856 FSPVVKHSSIRLLLAFVAHEDLELDQLDVKT 886
Score = 28.1 bits (61), Expect(2) = 1e-24
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPE 302
FLH EL+E IYM+ PE
Sbjct: 888 FLHGELDELIYMQPPE 903
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 101 bits (252), Expect(2) = 1e-24
Identities = 56/90 (62%), Positives = 72/90 (80%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L +N+T ELV+LPK KAIG KWV++ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 813 ALRKNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 872
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SPVV+ T+IR +LAM A DL LEQLDVKT
Sbjct: 873 SPVVRLTTIRVVLAMCAALDLHLEQLDVKT 902
Score = 37.7 bits (86), Expect(2) = 1e-24
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QPEG+ ++G+
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGK 926
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103833265
[Brassica rapa]
Length = 3353
Score = 103 bits (258), Expect(2) = 3e-24
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDNE------QYKAKLVTKGYAQKKGVDYNEI 163
SLNRN T +L++ PK K +GCKW+F+ K ++K +LV KG++QK+G+DYNE+
Sbjct: 796 SLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGFSQKEGIDYNEV 855
Query: 164 FSPVVKHTSIRL-LAMVAHGDLELEQLDVKT 253
FSPVVKH SIRL L++V + D ELEQLDVKT
Sbjct: 856 FSPVVKHVSIRLMLSIVVNRDYELEQLDVKT 886
Score = 103 bits (258), Expect(2) = 3e-24
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDNE------QYKAKLVTKGYAQKKGVDYNEI 163
SLNRN T +L++ PK K +GCKW+F+ K ++K +LV KG++QK+G+DYNE+
Sbjct: 1495 SLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGFSQKEGIDYNEV 1554
Query: 164 FSPVVKHTSIRL-LAMVAHGDLELEQLDVKT 253
FSPVVKH SIRL L++V + D ELEQLDVKT
Sbjct: 1555 FSPVVKHVSIRLMLSIVVNRDYELEQLDVKT 1585
Score = 103 bits (258), Expect(2) = 3e-24
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDNE------QYKAKLVTKGYAQKKGVDYNEI 163
SLNRN T +L++ PK K +GCKW+F+ K ++K +LV KG++QK+G+DYNE+
Sbjct: 2871 SLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGFSQKEGIDYNEV 2930
Query: 164 FSPVVKHTSIRL-LAMVAHGDLELEQLDVKT 253
FSPVVKH SIRL L++V + D ELEQLDVKT
Sbjct: 2931 FSPVVKHVSIRLMLSIVVNRDYELEQLDVKT 2961
Score = 34.3 bits (77), Expect(2) = 3e-24
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKG 320
FLH L+E+I M+QPEGY + G
Sbjct: 888 FLHGNLDERILMDQPEGYVKPG 909
Score = 34.3 bits (77), Expect(2) = 3e-24
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKG 320
FLH L+E+I M+QPEGY + G
Sbjct: 1587 FLHGNLDERILMDQPEGYVKPG 1608
Score = 34.3 bits (77), Expect(2) = 3e-24
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKG 320
FLH L+E+I M+QPEGY + G
Sbjct: 2963 FLHGNLDERILMDQPEGYVKPG 2984
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 103 bits (258), Expect(2) = 4e-24
Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDN------EQYKAKLVTKGYAQKKGVDYNEI 163
SL +NQT ELV LP+ K + CKW+F+ KD +YK++LV KG++QK+G+DYNE+
Sbjct: 939 SLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEV 998
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSPVVKH SIR LLAMV+ +LEL+QLDVKT
Sbjct: 999 FSPVVKHKSIRVLLAMVSVFNLELDQLDVKT 1029
Score = 33.9 bits (76), Expect(2) = 4e-24
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGY 308
FLH LEE+IYM+QPEG+
Sbjct: 1031 FLHGNLEEEIYMKQPEGF 1048
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 100 bits (249), Expect(2) = 4e-24
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDN------EQYKAKLVTKGYAQKKGVDYNEI 163
SL +N T ELV LPK K + CKW+F++K+ ++KAKLV KG++Q GVDYN++
Sbjct: 515 SLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKAKLVAKGFSQIAGVDYNDV 574
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSPVVKH+SIR ++VA DLELEQLDVKT
Sbjct: 575 FSPVVKHSSIRTFFSIVAMHDLELEQLDVKT 605
Score = 37.4 bits (85), Expect(2) = 4e-24
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM+QPEG+ G+
Sbjct: 607 FLHGELEEEIYMDQPEGFIVPGK 629
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 100 bits (248), Expect(2) = 5e-24
Identities = 54/90 (60%), Positives = 72/90 (80%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L++N+T ELV LP+ KAIG KWV++ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 817 ALHKNKTWELVPLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 876
Query: 167 SPVVKHTSIRL-LAMVAHGDLELEQLDVKT 253
SPVV+ T++R+ LAM A DL LEQLDVKT
Sbjct: 877 SPVVRLTTVRIVLAMCATFDLHLEQLDVKT 906
Score = 37.4 bits (85), Expect(2) = 5e-24
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QPEG+ + G+
Sbjct: 908 FLHGELEEEIYMLQPEGFAETGK 930
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 99.0 bits (245), Expect(2) = 1e-23
Identities = 53/90 (58%), Positives = 70/90 (77%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDNE----QYKAKLVTKGYAQKKGVDYNEIF 166
SL +N T +LV+LPK + + CKWVF+ KKD + +YKA+LV KG+ QKKG+D++EIF
Sbjct: 836 SLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIF 895
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SPVVK TSIR +L++ A DLE+EQLDVKT
Sbjct: 896 SPVVKMTSIRTILSLAASLDLEVEQLDVKT 925
Score = 37.4 bits (85), Expect(2) = 1e-23
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH +LEE+IYMEQPEG+ G+
Sbjct: 927 FLHGDLEEEIYMEQPEGFEVAGK 949
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 99.0 bits (245), Expect(2) = 1e-23
Identities = 54/90 (60%), Positives = 71/90 (78%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
+L++N+T ELV LP KAIG KWV++ K+D E+Y+A+LV KGYAQK+G+D+NEIF
Sbjct: 817 ALHKNKTWELVPLPHGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIF 876
Query: 167 SPVVKHTSIRL-LAMVAHGDLELEQLDVKT 253
SPVV+ T++R+ LAM A DL LEQLDVKT
Sbjct: 877 SPVVRLTTVRIVLAMCATFDLHLEQLDVKT 906
Score = 37.4 bits (85), Expect(2) = 1e-23
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM QPEG+ + G+
Sbjct: 908 FLHGELEEEIYMLQPEGFAETGK 930
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 99.0 bits (245), Expect(2) = 1e-23
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKKDN------EQYKAKLVTKGYAQKKGVDYNEI 163
SL +N T ELV LPK K + CKW+F++K+ ++KA+LV KG++Q GVDYN++
Sbjct: 831 SLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDV 890
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
FSPVVKH+SIR ++VA DLELEQLDVKT
Sbjct: 891 FSPVVKHSSIRTFFSIVAMHDLELEQLDVKT 921
Score = 37.4 bits (85), Expect(2) = 1e-23
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQKGQ 323
FLH ELEE+IYM+QPEG+ G+
Sbjct: 923 FLHGELEEEIYMDQPEGFIVPGK 945
>gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
Length = 1309
Score = 101 bits (251), Expect(2) = 2e-23
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 7/83 (8%)
Frame = +2
Query: 26 ELVDLPKNSKAIGCKWVFQKK------DNEQYKAKLVTKGYAQKKGVDYNEIFSPVVKHT 187
E V + K IGCKWV+ KK DN ++KA+LV KGYAQK+G+DYNE+FSPVVKH+
Sbjct: 97 EAVQSVERKKTIGCKWVYAKKEGNPGKDNIRFKARLVAKGYAQKEGIDYNEVFSPVVKHS 156
Query: 188 SIR-LLAMVAHGDLELEQLDVKT 253
SIR LLA+VA DLEL QLDVKT
Sbjct: 157 SIRILLALVAQFDLELAQLDVKT 179
Score = 34.7 bits (78), Expect(2) = 2e-23
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGYTQK 317
FLH +LEE+IYM QP+G+ K
Sbjct: 181 FLHGDLEEEIYMSQPDGFKSK 201
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 100 bits (250), Expect(2) = 2e-23
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQKK------DNEQYKAKLVTKGYAQKKGVDYNEI 163
S +N T +V P+N + IGC+W+F+ K + ++KA+LV KGYAQK+G+DY+EI
Sbjct: 862 SQEKNNTWTIVTRPENQRIIGCRWIFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEI 921
Query: 164 FSPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
F+PVVKH SIR LL++VA DLELEQLDVKT
Sbjct: 922 FAPVVKHVSIRVLLSIVAQEDLELEQLDVKT 952
Score = 34.7 bits (78), Expect(2) = 2e-23
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGY 308
FLH EL+EKIYM PEGY
Sbjct: 954 FLHGELKEKIYMSPPEGY 971
>emb|CAN65518.1| hypothetical protein VITISV_004207 [Vitis vinifera]
Length = 162
Score = 101 bits (251), Expect(2) = 2e-23
Identities = 53/90 (58%), Positives = 69/90 (76%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 SLNRNQT*ELVDLPKNSKAIGCKWVFQ-KKDN----EQYKAKLVTKGYAQKKGVDYNEIF 166
S+ N +LV+LP +KAIGCKWVF+ KKD+ E+YKA+LV KG+ QK+G+DY E F
Sbjct: 7 SMKCNDVWDLVELPNGAKAIGCKWVFKTKKDSSGNIERYKARLVAKGFTQKEGIDYTETF 66
Query: 167 SPVVKHTSIR-LLAMVAHGDLELEQLDVKT 253
SPV K S+R +LA+VAH DLEL+Q+DVKT
Sbjct: 67 SPVSKKDSLRIILALVAHFDLELQQMDVKT 96
Score = 34.3 bits (77), Expect(2) = 2e-23
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 255 FLHSELEEKIYMEQPEGY 308
FL+ ELEEK+YM+QPEG+
Sbjct: 98 FLNGELEEKVYMKQPEGF 115