BLASTX nr result

ID: Anemarrhena21_contig00046618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00046618
         (386 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                51   5e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 50.8 bits (120), Expect(2) = 5e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
 Frame = +2

Query: 155 GCKQAQHLALRFSLRI-ISSN*YHKFRC--WKPSHL--KKGSRYYIISIDDYSRFTWVYL 319
           GCK A+  AL F+    +SS+ +       W PS +  K GSRYY+  IDD++R+ WVYL
Sbjct: 515 GCKLAKFSALPFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYL 574

Query: 320 LASKSEVFSKY 352
           +  +SE F  Y
Sbjct: 575 MKHRSEFFEIY 585



 Score = 25.8 bits (55), Expect(2) = 5e-06
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 54  IWHRYLSHLSLCRLWYSSNSYGLGSFST 137
           +WH  L H+S  RL + +++  LG+  T
Sbjct: 480 LWHSRLGHVSSSRLRFLASTGALGNLKT 507


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