BLASTX nr result
ID: Anemarrhena21_contig00046605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00046605
(739 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 134 1e-45
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas... 125 4e-45
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 114 2e-44
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 114 2e-44
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 114 5e-44
ref|XP_010670869.1| PREDICTED: uncharacterized protein LOC104887... 112 1e-43
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A... 117 2e-42
ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein A... 115 1e-41
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 116 3e-39
ref|XP_010484806.1| PREDICTED: uncharacterized protein LOC104763... 109 3e-37
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 110 5e-37
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 119 9e-37
ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844... 111 1e-36
ref|XP_008228034.1| PREDICTED: putative ribonuclease H protein A... 107 9e-36
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 111 2e-35
gb|KHN44920.1| Retrovirus-related Pol polyprotein LINE-1, partia... 104 8e-35
gb|KFK31800.1| hypothetical protein AALP_AA6G160500 [Arabis alpina] 111 2e-34
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936... 92 3e-34
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 103 6e-34
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 101 8e-34
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 134 bits (338), Expect(3) = 1e-45
Identities = 63/110 (57%), Positives = 82/110 (74%)
Frame = -2
Query: 423 ADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
ADN I++Q+++ M++S+ K+G V KLDLEKA+D ++W+FL L DF FPD IVKLIM
Sbjct: 550 ADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFLNSCLLDFGFPDIIVKLIM 609
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKLGAFITD 94
HC+SSA S+LW PFKP+ G+RQG PLSPYLF+LC+EKL I D
Sbjct: 610 HCVSSANYSLLWNGNKMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQD 659
Score = 70.5 bits (171), Expect(3) = 1e-45
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = -3
Query: 617 ISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSE 438
IS + I LIPK+D P FRPI+L N YK+I K LV+R+RP L + + YQSSFL
Sbjct: 487 ISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPG 546
Query: 437 RSAAEQTI 414
R A+ +I
Sbjct: 547 RGTADNSI 554
Score = 26.6 bits (57), Expect(3) = 1e-45
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
+P++ G +SH+ FADD+LL
Sbjct: 667 EPIHIINDGPQISHLLFADDVLL 689
>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 125 bits (314), Expect(4) = 4e-45
Identities = 55/108 (50%), Positives = 78/108 (72%)
Frame = -2
Query: 423 ADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
+DN I++Q+++ M +S+ K+G V KLDLEKA+D ++W FL L+DF FPD +KLIM
Sbjct: 110 SDNSIVLQEIVHFMRRSKRKKGYVAFKLDLEKAFDNVNWEFLRSCLQDFGFPDDTIKLIM 169
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKLGAFI 100
HC++S+ S+LW P KP+ G+RQG PLSPYLF++C+EKL I
Sbjct: 170 HCVTSSTFSVLWNGNKWPPIKPTHGLRQGDPLSPYLFIICMEKLSLAI 217
Score = 70.1 bits (170), Expect(4) = 4e-45
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = -3
Query: 617 ISKSFITLIPKVDHPELVTH--FRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFL 444
IS++ I LIPK+D P T+ FRPI+L N+TYK+I K +V+R+RPIL + YQSSFL
Sbjct: 45 ISETLIALIPKIDPPPPQTYKDFRPISLYNITYKIITKVIVHRLRPILNDIIGPYQSSFL 104
Query: 443 SERSAAEQTI 414
R ++ +I
Sbjct: 105 QGRGTSDNSI 114
Score = 30.4 bits (67), Expect(4) = 4e-45
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
K+ PDG Q F+++ +V +FQL+S+ F
Sbjct: 5 KSPGPDGFQCIFFKQYWHIVREDIFQLVSTAF 36
Score = 24.6 bits (52), Expect(4) = 4e-45
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 91 VRIGV*KPVYATRGGLGLSHVFFADDLLL 5
V G +P+ + LSH+ FADD+LL
Sbjct: 221 VHEGEWEPIRMSASSPPLSHLLFADDVLL 249
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 114 bits (285), Expect(4) = 2e-44
Identities = 52/106 (49%), Positives = 75/106 (70%)
Frame = -2
Query: 429 SRADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKL 250
S DN+IL Q+V+ +M R K+ +I+K+DL+KAYD +SW++LE+TL DF FP +++ L
Sbjct: 1082 STMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFGFPRRLIDL 1141
Query: 249 IMHCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
I+ L + ++ILW PFKP RG+RQG PL PYLF L +E+L
Sbjct: 1142 ILFSLQESSLAILWNGGRPPPFKPGRGLRQGDPLVPYLFNLVMERL 1187
Score = 70.5 bits (171), Expect(4) = 2e-44
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = -3
Query: 611 KSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSERS 432
++F+TLIPK D PE FRPI L NV++K+I+K LVNR+RPI+ + + +Q+SFL RS
Sbjct: 1023 QAFMTLIPKKDTPETAADFRPITLPNVSFKVISKVLVNRLRPIMSNIIGPHQNSFLPGRS 1082
Query: 431 AAEQTI 414
+ I
Sbjct: 1083 TMDNVI 1088
Score = 42.0 bits (97), Expect(4) = 2e-44
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KPV+ TRGG G+SH+FFADDL+L
Sbjct: 1201 KPVHITRGGTGISHLFFADDLML 1223
Score = 21.6 bits (44), Expect(4) = 2e-44
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 723 PDGIQAFFYQK 691
PDGI A FYQ+
Sbjct: 985 PDGIPAVFYQQ 995
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 114 bits (286), Expect(4) = 2e-44
Identities = 52/106 (49%), Positives = 76/106 (71%)
Frame = -2
Query: 429 SRADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKL 250
S DN+IL Q+V+ +M R K+ +I+K+DL+KAYD +SW++LE+TL DF FP +++ L
Sbjct: 550 STMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFGFPRRLIDL 609
Query: 249 IMHCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
I+ L + ++ILW PFKP RG+RQG PL+PYLF L +E+L
Sbjct: 610 ILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERL 655
Score = 70.1 bits (170), Expect(4) = 2e-44
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = -3
Query: 611 KSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSERS 432
++F+TLIPK D PE FRPI L NV++K+I+K LVNR+RPI+ + + +Q+SFL RS
Sbjct: 491 QAFMTLIPKKDTPETAADFRPITLLNVSFKVISKVLVNRLRPIMSNIIGPHQNSFLPGRS 550
Query: 431 AAEQTI 414
+ I
Sbjct: 551 TMDNVI 556
Score = 42.0 bits (97), Expect(4) = 2e-44
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KPV+ TRGG G+SH+FFADDL+L
Sbjct: 669 KPVHITRGGTGISHLFFADDLML 691
Score = 21.6 bits (44), Expect(4) = 2e-44
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 723 PDGIQAFFYQK 691
PDGI A FYQ+
Sbjct: 453 PDGIPAVFYQQ 463
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 114 bits (286), Expect(4) = 5e-44
Identities = 52/106 (49%), Positives = 76/106 (71%)
Frame = -2
Query: 429 SRADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKL 250
S DN+IL Q+V+ +M R K+ +I+K+DL+KAYD +SW++LE+TL DF FP +++ L
Sbjct: 550 STMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFGFPRRLIDL 609
Query: 249 IMHCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
I+ L + ++ILW PFKP RG+RQG PL+PYLF L +E+L
Sbjct: 610 ILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERL 655
Score = 68.6 bits (166), Expect(4) = 5e-44
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = -3
Query: 611 KSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSERS 432
++F+TLIPK D PE FRPI L N ++K+I+K LVNR+RPI+ + + +Q+SFL RS
Sbjct: 491 QAFMTLIPKKDTPETAADFRPITLLNASFKVISKVLVNRLRPIMSNIIGPHQNSFLPGRS 550
Query: 431 AAEQTI 414
+ I
Sbjct: 551 TMDNVI 556
Score = 42.0 bits (97), Expect(4) = 5e-44
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KPV+ TRGG G+SH+FFADDL+L
Sbjct: 669 KPVHITRGGTGISHLFFADDLML 691
Score = 21.6 bits (44), Expect(4) = 5e-44
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 723 PDGIQAFFYQK 691
PDGI A FYQ+
Sbjct: 453 PDGIPAVFYQQ 463
>ref|XP_010670869.1| PREDICTED: uncharacterized protein LOC104887816 [Beta vulgaris
subsp. vulgaris]
Length = 1295
Score = 112 bits (281), Expect(4) = 1e-43
Identities = 51/103 (49%), Positives = 71/103 (68%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNII++Q+VI M++ +G++G + +K+D EKAYD + W F+ TL P +V IM
Sbjct: 502 DNIIIMQEVIHTMKRKQGRKGFMAIKIDFEKAYDRLRWKFIRDTLLQMNLPILLVDTIME 561
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C+ SA M +LW P F PSRGIRQG PLSPYLF++C+E+L
Sbjct: 562 CVCSASMRVLWNGEPTDSFSPSRGIRQGDPLSPYLFVMCMERL 604
Score = 70.9 bits (172), Expect(4) = 1e-43
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P +++++FI L+PKVD+PE FRPI L NV YK++ K LVNRI+P+L ++ Q SF
Sbjct: 435 PEKMNETFIALLPKVDNPETAAQFRPIGLCNVIYKVVTKVLVNRIKPVLPRLISNTQGSF 494
Query: 446 LSERSAAEQTI 414
+ R + I
Sbjct: 495 VPGRQITDNII 505
Score = 33.5 bits (75), Expect(4) = 1e-43
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP++A+R G LS++FFADD++L
Sbjct: 618 KPIHASRNGPSLSNLFFADDIVL 640
Score = 28.5 bits (62), Expect(4) = 1e-43
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 738 LKASEPDGIQAFFYQKN*EVVHSTLFQLIS 649
LKA PDG Q F+QKN ++V + + ++
Sbjct: 397 LKAPGPDGFQPLFFQKNWDLVKDDVTKAVT 426
>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1011
Score = 117 bits (293), Expect(4) = 2e-42
Identities = 54/113 (47%), Positives = 78/113 (69%)
Frame = -2
Query: 423 ADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
ADNI+++Q+ + +M + +G++G +++KLDLEKAYD + W+FLE TLR + V+ +M
Sbjct: 192 ADNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRLRWDFLEDTLRAAGLSEVWVRRVM 251
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKLGAFITDLSE 85
C+S M ILW FKPSRG+RQG PLSPYLF+LC+E+L I + E
Sbjct: 252 ECVSGPSMCILWNGEKTESFKPSRGLRQGDPLSPYLFVLCMERLCHLIEEAVE 304
Score = 62.8 bits (151), Expect(4) = 2e-42
Identities = 27/71 (38%), Positives = 46/71 (64%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P + + + + LIPKV PE +T FRPI+L NV +K+I K +V R++ +++ + QSSF
Sbjct: 126 PEDTNDALVVLIPKVTKPESITQFRPISLCNVLFKIITKAMVGRLKGVMKKLIGPAQSSF 185
Query: 446 LSERSAAEQTI 414
+ R +A+ +
Sbjct: 186 IPGRLSADNIV 196
Score = 33.1 bits (74), Expect(4) = 2e-42
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ +RGG LSH+ FADDL+L
Sbjct: 309 KPIKLSRGGPELSHICFADDLIL 331
Score = 27.7 bits (60), Expect(4) = 2e-42
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ+ E V +++ + + FF
Sbjct: 89 KAPGPDGFQPVFYQRCWETVGNSVARFATLFF 120
>ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1204
Score = 115 bits (289), Expect(4) = 1e-41
Identities = 54/104 (51%), Positives = 74/104 (71%)
Frame = -2
Query: 423 ADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
ADNI+++Q+ + +M K +G++G +++KLDLEKAYD + W+FLE TLR P+ V IM
Sbjct: 385 ADNIVVVQEAVHSMRKKKGQKGWMLLKLDLEKAYDRLRWDFLEDTLRAAGLPEGWVGRIM 444
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C+S MSILW FKPSRG+RQG PLSPYL +LC+ +L
Sbjct: 445 ECVSGPSMSILWNGEKTDSFKPSRGLRQGDPLSPYLLVLCMGRL 488
Score = 62.4 bits (150), Expect(4) = 1e-41
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P + + + LIPKV PE +T FRPI+L NV +K+I K +V R++ +++ + QSSF
Sbjct: 319 PENTNDALVVLIPKVSKPESITQFRPISLCNVLFKIITKAMVGRLKGVMKKLIGPAQSSF 378
Query: 446 LSERSAAEQTI 414
+ R +A+ +
Sbjct: 379 IPGRLSADNIV 389
Score = 32.0 bits (71), Expect(4) = 1e-41
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ +RGG L+H+ FADDL+L
Sbjct: 502 KPIKLSRGGPQLTHICFADDLIL 524
Score = 28.5 bits (62), Expect(4) = 1e-41
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ+ E V ++ I FF
Sbjct: 282 KAPGPDGFQPVFYQRCWETVGPSVISFILRFF 313
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1235
Score = 116 bits (290), Expect(4) = 3e-39
Identities = 52/104 (50%), Positives = 75/104 (72%)
Frame = -2
Query: 423 ADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
+DNI+++Q+ + +M + +G+RG +++KLDLEKAYD I W+FLE TL P +K IM
Sbjct: 411 SDNIVIVQEAVHSMRRKKGRRGWMLLKLDLEKAYDRIRWDFLEDTLNAARLPPVWIKWIM 470
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C+++ MS+LW FKP RG+RQG PLSPYLF+LC+E+L
Sbjct: 471 ECVTNPGMSLLWNGERTEAFKPQRGLRQGDPLSPYLFVLCMERL 514
Score = 52.4 bits (124), Expect(4) = 3e-39
Identities = 23/68 (33%), Positives = 43/68 (63%)
Frame = -3
Query: 617 ISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSE 438
++ + + LIPKV PE + FRPI+L NV +K+I K +V R++ ++ + Q+SF+
Sbjct: 348 MNDALVVLIPKVLKPERIMQFRPISLCNVLFKIITKTMVLRLKKLMSKLIGPSQASFIPG 407
Query: 437 RSAAEQTI 414
R +++ +
Sbjct: 408 RLSSDNIV 415
Score = 33.9 bits (76), Expect(4) = 3e-39
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ +RGG LSH+ FADDL+L
Sbjct: 528 KPIKLSRGGPALSHICFADDLIL 550
Score = 28.1 bits (61), Expect(4) = 3e-39
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ + EVV +++ + FF
Sbjct: 308 KAPGPDGFQPVFYQDSWEVVGASVTRFGLEFF 339
>ref|XP_010484806.1| PREDICTED: uncharacterized protein LOC104763089 [Camelina sativa]
Length = 1130
Score = 109 bits (273), Expect(4) = 3e-37
Identities = 46/103 (44%), Positives = 72/103 (69%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNI+++Q+ + +M + G++G +++KLDLEKAYD + W+FLE TL+ + I+
Sbjct: 468 DNIVIVQEAVHSMRRKNGRKGWMLLKLDLEKAYDRVRWDFLEDTLKVAGLSTEWRNWILQ 527
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C+ M++LW +PF PSRG+RQG PLSPYLF++C+E+L
Sbjct: 528 CVVGPSMTVLWNGEKTIPFTPSRGLRQGDPLSPYLFVMCLERL 570
Score = 53.5 bits (127), Expect(4) = 3e-37
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P E++ + + LI KV PE + FRPI+L NV +K+I K +V R++ ++ + Q+SF
Sbjct: 401 PRELNDALVVLIAKVVKPENMAQFRPISLCNVLFKIITKMMVLRLKTVMPKLIGPAQASF 460
Query: 446 LSERSAAEQTI 414
+ R + + +
Sbjct: 461 IPVRLSTDNIV 471
Score = 33.1 bits (74), Expect(4) = 3e-37
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ +RGG LSH+ FADDL+L
Sbjct: 584 KPISLSRGGPKLSHICFADDLIL 606
Score = 27.3 bits (59), Expect(4) = 3e-37
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ ++V +++ + + FF
Sbjct: 364 KAPGPDGFQPIFYQHCWDMVGTSVTRFVLDFF 395
>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
[Brassica rapa]
Length = 1638
Score = 110 bits (276), Expect(4) = 5e-37
Identities = 50/103 (48%), Positives = 72/103 (69%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNI+++Q+ + +M + +G++G +++KLDLEKAYD I W+FLE TL P +K IM
Sbjct: 975 DNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLEDTLYAAKLPQVWIKWIME 1034
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C+ + MS+LW F P RG+RQG PLSPYLF+LC+E+L
Sbjct: 1035 CVMNPGMSLLWNGERTEAFTPQRGLRQGDPLSPYLFVLCMERL 1077
Score = 51.6 bits (122), Expect(4) = 5e-37
Identities = 23/68 (33%), Positives = 42/68 (61%)
Frame = -3
Query: 617 ISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSE 438
++ + + LIPKV PE + FRPI+L NV +K+I K +V R++ ++ + Q+SF+
Sbjct: 911 MNDAMVVLIPKVLKPERIAQFRPISLCNVLFKIITKAMVLRLKSLMPVLIGPAQASFIPG 970
Query: 437 RSAAEQTI 414
R + + +
Sbjct: 971 RLSTDNIV 978
Score = 33.9 bits (76), Expect(4) = 5e-37
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ +RGG LSH+ FADDL+L
Sbjct: 1091 KPIRLSRGGPSLSHICFADDLIL 1113
Score = 26.6 bits (57), Expect(4) = 5e-37
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ + +VV ++ + FF
Sbjct: 871 KAPGPDGFQPVFYQDSWDVVGESVARFGLEFF 902
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 119 bits (297), Expect(3) = 9e-37
Identities = 54/106 (50%), Positives = 79/106 (74%)
Frame = -2
Query: 429 SRADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKL 250
S DN+IL Q+V+ +M RGK+GS+I+K+DL+KAYD +SW+FLEKTL F FP +I++L
Sbjct: 1020 STMDNVILTQEVVHSMNTKRGKKGSMIVKIDLQKAYDSVSWSFLEKTLDSFGFPRQIIEL 1079
Query: 249 IMHCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
++ L +++S+LW FKP RG+RQG PL+PYLF + +E+L
Sbjct: 1080 LLFSLRESDISVLWNGGCLPAFKPGRGLRQGDPLAPYLFNIVMERL 1125
Score = 42.4 bits (98), Expect(3) = 9e-37
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = -3
Query: 542 LSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSERSAAEQTI 414
L NV +K+I+K LVNR+RPI+ + + +Q+SFL RS + I
Sbjct: 984 LLNVAFKVISKVLVNRLRPIMCNLIGPHQNSFLPGRSTMDNVI 1026
Score = 40.8 bits (94), Expect(3) = 9e-37
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -1
Query: 91 VRIGV*KPVYATRGGLGLSHVFFADDLLL 5
V G KP+ +RGG+G+SH+FFADDL+L
Sbjct: 1133 VTAGCWKPIKISRGGIGISHLFFADDLML 1161
>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
Length = 1834
Score = 111 bits (277), Expect(4) = 1e-36
Identities = 50/103 (48%), Positives = 72/103 (69%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNI+++Q+ + +M + +GK+G +++KLDLEKAYD I W+FLE TL P + IM
Sbjct: 1011 DNIVIVQEAVHSMRRKKGKKGWMLLKLDLEKAYDRIRWDFLEDTLHAAKLPQTWITWIME 1070
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C+++ MS+LW F P RG+RQG PLSPYLF+LC+E+L
Sbjct: 1071 CVTNPGMSLLWNGERTEAFIPQRGLRQGDPLSPYLFVLCMERL 1113
Score = 51.2 bits (121), Expect(4) = 1e-36
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = -3
Query: 617 ISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFLSE 438
++ + + LIPKV PE + FRPI+L NV +K I K +V R++ ++ + Q+SF+
Sbjct: 947 MNDAMLVLIPKVLKPEKIMQFRPISLCNVLFKTITKAMVMRLKTLMSKLIGPAQASFIPG 1006
Query: 437 RSAAEQTI 414
R + + +
Sbjct: 1007 RLSTDNIV 1014
Score = 32.0 bits (71), Expect(4) = 1e-36
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ +RGG +SH+ FADDL++
Sbjct: 1127 KPIKLSRGGPSVSHICFADDLIM 1149
Score = 27.3 bits (59), Expect(4) = 1e-36
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ++ +VV ++ + FF
Sbjct: 907 KAPGPDGFQPIFYQESWDVVGESVTRCGLEFF 938
>ref|XP_008228034.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 751
Score = 107 bits (267), Expect(3) = 9e-36
Identities = 53/109 (48%), Positives = 69/109 (63%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNI++ Q+++ + S+GK+G V K+DL KAYD +SW+F+E L + P VKLIM+
Sbjct: 129 DNILIAQELMHKFKLSKGKKGFVAWKIDLSKAYDRLSWHFVEYVLLELRLPAPFVKLIMN 188
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKLGAFITD 94
C+ S I PF P GIRQG PLSPYLF+LCIEKL I D
Sbjct: 189 CVQSVRYQINVNGELTAPFSPMNGIRQGDPLSPYLFVLCIEKLSHIICD 237
Score = 60.1 bits (144), Expect(3) = 9e-36
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P+ ++ + ITL+PKV P+ + FRPI+L + YK+I+K LV R+RPIL ++ Q SF
Sbjct: 62 PDRLNYTLITLVPKVQSPQSMVQFRPISLCSTLYKVISKILVARLRPILPDLISPNQVSF 121
Query: 446 LSERSAAEQTI 414
+ R + +
Sbjct: 122 IPGRHITDNIL 132
Score = 31.2 bits (69), Expect(3) = 9e-36
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
+PV +++ G +SH+FFADDL+L
Sbjct: 245 RPVKSSQSGPAISHLFFADDLVL 267
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 111 bits (278), Expect(4) = 2e-35
Identities = 49/103 (47%), Positives = 73/103 (70%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNI+++Q+ + +M + +G++G +++KLDLEKAYD I W+FL +TL + +K IM
Sbjct: 364 DNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLEAAGLSEGWIKRIME 423
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C++ EMS+LW F P RG+RQG P+SPYLF+LCIE+L
Sbjct: 424 CVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLFVLCIERL 466
Score = 50.4 bits (119), Expect(4) = 2e-35
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P + + L+ KV PE +T FRP++L NV +K+I K +V R++ ++ + Q+SF
Sbjct: 297 PKSTNDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASF 356
Query: 446 LSERSAAEQTI 414
+ R + + +
Sbjct: 357 IPGRLSFDNIV 367
Score = 28.1 bits (61), Expect(4) = 2e-35
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ+ E V ++ + + FF
Sbjct: 260 KAPGPDGYQPVFYQQCWETVGESVSKFVMEFF 291
Score = 27.7 bits (60), Expect(4) = 2e-35
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
K + ++GG +SHV FADDL+L
Sbjct: 480 KSISISQGGPKVSHVCFADDLIL 502
>gb|KHN44920.1| Retrovirus-related Pol polyprotein LINE-1, partial [Glycine soja]
Length = 247
Score = 104 bits (259), Expect(3) = 8e-35
Identities = 52/135 (38%), Positives = 77/135 (57%)
Frame = -2
Query: 453 QFSLRKKCSRADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFA 274
Q S C ++I++ Q+V M +G +G + +K+DLEKAYD +SW F++ L D
Sbjct: 58 QCSFFPNCQSRNSIVIAQEVFHRMRSRKGSKGWMAIKIDLEKAYDRLSWKFVKDILLDIG 117
Query: 273 FPDKIVKLIMHCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKLGAFITD 94
+ +I +C+SS+ M +LW F+P RGIRQG P+SPYLF+LCIE L I
Sbjct: 118 CSYNFINIIWYCISSSTMKVLWNGEALDEFQPMRGIRQGDPISPYLFVLCIEHLFQPINI 177
Query: 93 LSELVYENQCMLPEG 49
+ E + N + G
Sbjct: 178 VVENSFWNPIKIARG 192
Score = 62.8 bits (151), Expect(3) = 8e-35
Identities = 28/57 (49%), Positives = 44/57 (77%)
Frame = -3
Query: 617 ISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
I+ F++LIPK+DH E +T RPI+L NV+YK+I K L +R+RP++++ ++L Q SF
Sbjct: 5 INDIFLSLIPKMDHVEKMTEVRPISLCNVSYKVITKILAHRMRPMMETLVSLCQCSF 61
Score = 28.5 bits (62), Expect(3) = 8e-35
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 70 PVYATRGGLGLSHVFFADDLLL 5
P+ RG LSH+ FADDLLL
Sbjct: 186 PIKIARGAPKLSHLAFADDLLL 207
>gb|KFK31800.1| hypothetical protein AALP_AA6G160500 [Arabis alpina]
Length = 1096
Score = 111 bits (278), Expect(3) = 2e-34
Identities = 50/104 (48%), Positives = 74/104 (71%)
Frame = -2
Query: 423 ADNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
ADNI+++Q+ + +M + +G++G +++KLDLEKAYD I W+FL+ TL PD+ V+ I
Sbjct: 843 ADNIVVVQESVHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLQDTLEAARLPDEWVRWIK 902
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
C++ M++LW KP RGIRQG PLSPYLF+LC+E+L
Sbjct: 903 ACVTGPTMNLLWNGEKSENIKPLRGIRQGDPLSPYLFVLCLERL 946
Score = 54.3 bits (129), Expect(3) = 2e-34
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P ++ + + LI KV PE++T RPI+L NV +K I K +V R++ ++ + + QSSF
Sbjct: 777 PEGMNDALVVLIAKVGKPEMMTQVRPISLCNVIFKTITKAMVIRMKKVMPNLIGPEQSSF 836
Query: 446 LSERSAAEQTI 414
+ R +A+ +
Sbjct: 837 IPGRLSADNIV 847
Score = 28.1 bits (61), Expect(3) = 2e-34
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 70 PVYATRGGLGLSHVFFADDLLL 5
P+ + GG LSH+ FADDL+L
Sbjct: 961 PISLSCGGPKLSHICFADDLIL 982
>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
bretschneideri]
Length = 1365
Score = 92.0 bits (227), Expect(4) = 3e-34
Identities = 42/107 (39%), Positives = 65/107 (60%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DN+I+ Q+++ ++GK+G + K+DL KAYD + W+F+ L + K+++LIM
Sbjct: 548 DNVIVAQEILHKYRNTKGKKGFIAWKIDLSKAYDRLQWSFIRDVLWEIGLRGKMLELIMQ 607
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKLGAFI 100
C+++ + F P GIRQG PLSPYLF+LC+EKL I
Sbjct: 608 CVTTVNYQAIVNGELTDSFSPQCGIRQGDPLSPYLFVLCMEKLSHII 654
Score = 64.3 bits (155), Expect(4) = 3e-34
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P+ I+ +FI+LIPKVD+P +T RPI+L + YK+I+K LV ++RP+L ++ Q SF
Sbjct: 481 PDNINNTFISLIPKVDNPTSMTQLRPISLCSTLYKVISKILVGKLRPLLHKLVSPTQVSF 540
Query: 446 LSERSAAEQTI 414
+ R + I
Sbjct: 541 VPGRQIIDNVI 551
Score = 31.2 bits (69), Expect(4) = 3e-34
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KPV +R G +SH+FFADDL+L
Sbjct: 664 KPVKLSRYGPPVSHLFFADDLIL 686
Score = 26.2 bits (56), Expect(4) = 3e-34
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2
Query: 738 LKASEPDGIQAFFYQK 691
LKA PDGI A FYQK
Sbjct: 443 LKAPGPDGIPARFYQK 458
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 103 bits (256), Expect(4) = 6e-34
Identities = 46/103 (44%), Positives = 71/103 (68%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKRGSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIMH 241
DNI+L+Q+ + +M + +G++G +++KLDLEKAYD + W+FL++TL + IM
Sbjct: 412 DNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIMA 471
Query: 240 CLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIEKL 112
++ MS+LW F P+RG+RQG PLSPYLF+LC+E+L
Sbjct: 472 GVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERL 514
Score = 50.8 bits (120), Expect(4) = 6e-34
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = -3
Query: 626 PNEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSF 447
P + + + LI KV PE + FRP++L NV +K+I K +V R++ ++ + Q+SF
Sbjct: 345 PASTNDALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKLIGPAQASF 404
Query: 446 LSERSAAEQTI 414
+ R + + +
Sbjct: 405 IPGRLSIDNIV 415
Score = 31.2 bits (69), Expect(4) = 6e-34
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 73 KPVYATRGGLGLSHVFFADDLLL 5
KP+ + GG LSHV FADDL+L
Sbjct: 528 KPIAVSCGGSKLSHVCFADDLIL 550
Score = 27.3 bits (59), Expect(4) = 6e-34
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVVHSTLFQLISSFF 640
KA PDG Q FYQ+ E V ++ + + FF
Sbjct: 308 KAPGPDGYQPVFYQQCWETVGPSVTRFVLEFF 339
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 101 bits (251), Expect(3) = 8e-34
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Frame = -2
Query: 420 DNIILIQQVISNMEKSRGKR-GSVIMKLDLEKAYDMISWNFLEKTLRDFAFPDKIVKLIM 244
DN+I+ + + + S+G+R G V +KLD+ KAYD + WNFLE+T+ + F K + LIM
Sbjct: 643 DNVIIGYECLHKIRLSKGRRNGLVALKLDISKAYDRVEWNFLEQTMSNLGFSAKWISLIM 702
Query: 243 HCLSSAEMSILWED*PGLPFKPSRGIRQGCPLSPYLFLLCIE 118
C+++ S+L P KP RG+RQGCPLSPYLF+LC E
Sbjct: 703 SCITTTCFSVLINGNPVGLIKPERGLRQGCPLSPYLFILCAE 744
Score = 65.9 bits (159), Expect(3) = 8e-34
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = -3
Query: 623 NEISKSFITLIPKVDHPELVTHFRPIALSNVTYKLIAKCLVNRIRPILQSFMNLYQSSFL 444
+ ++ +FI LIPKV+ P V FRPI+L NV Y+++AK + NR++PIL ++ QS+F+
Sbjct: 577 DSLNHTFIALIPKVEKPRKVMEFRPISLCNVVYRIVAKAIANRLKPILNHIISPNQSAFI 636
Query: 443 SERSAAEQTI 414
R + I
Sbjct: 637 PNRLITDNVI 646
Score = 25.0 bits (53), Expect(3) = 8e-34
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 735 KASEPDGIQAFFYQKN*EVV 676
KA PDG+ A F+QK+ ++V
Sbjct: 539 KAPGPDGLPAAFFQKHWQIV 558