BLASTX nr result
ID: Anemarrhena21_contig00045376
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00045376
(423 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94326.1| RNA polymerase beta subunit (chloroplast) [Echean... 71 2e-13
gb|AEX94369.1| RNA polymerase beta subunit (chloroplast) [Tritel... 70 3e-13
gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichel... 70 3e-13
gb|AEX94367.1| RNA polymerase beta subunit (chloroplast) [Dichel... 70 3e-13
gb|AEX94338.1| RNA polymerase beta subunit (chloroplast) [Aphyll... 70 3e-13
gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventr... 70 4e-13
gb|AFB18328.1| RNA polymerase beta subunit, partial [Chlorophytu... 70 4e-13
gb|AEX94352.1| RNA polymerase beta subunit (chloroplast) [Oziroe... 70 4e-13
gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebo... 70 4e-13
ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [C... 70 4e-13
ref|YP_009059511.1| RNA polymerase beta subunit [Iris gatesii] g... 69 4e-13
gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera] 70 4e-13
gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe ... 69 8e-13
gb|AEX94370.1| RNA polymerase beta subunit (chloroplast) [Xantho... 69 8e-13
gb|AEX94345.1| RNA polymerase beta subunit (chloroplast) [Knipho... 69 8e-13
gb|AEX94343.1| RNA polymerase beta subunit (chloroplast) [Asphod... 69 8e-13
gb|AEX94342.1| RNA polymerase beta subunit (chloroplast) [Aloe v... 69 8e-13
gb|AEX94365.1| RNA polymerase beta subunit (chloroplast) [Brodia... 69 8e-13
gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyl... 69 8e-13
gb|AEX94353.1| RNA polymerase beta subunit (chloroplast) [Iris t... 68 8e-13
>gb|AEX94326.1| RNA polymerase beta subunit (chloroplast) [Echeandia sp. Steele
1101]
Length = 1070
Score = 71.2 bits (173), Expect(2) = 2e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEIEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 2e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGKDMQQQTVFI 101
>gb|AEX94369.1| RNA polymerase beta subunit (chloroplast) [Triteleia hyacinthina]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 3e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.8 bits (68), Expect(2) = 3e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLILKTGRDMQQQTVFI 101
>gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma ida-maia]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 3e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.8 bits (68), Expect(2) = 3e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +I+I
Sbjct: 81 YVPAGLIWKTGRDMQQQTIFI 101
>gb|AEX94367.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma congestum]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 3e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.8 bits (68), Expect(2) = 3e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +I+I
Sbjct: 81 YVPAGLIWKTGRDMQQQTIFI 101
>gb|AEX94338.1| RNA polymerase beta subunit (chloroplast) [Aphyllanthes
monspeliensis]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 3e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.8 bits (68), Expect(2) = 3e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +I+I
Sbjct: 81 YVPAGLIWKTGRDMQQQTIFI 101
>gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventricosa]
Length = 1077
Score = 70.5 bits (171), Expect(2) = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 36 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 89
Score = 30.4 bits (67), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 89 YVPAGLIWKTGRDMQQQTVFI 109
>gb|AFB18328.1| RNA polymerase beta subunit, partial [Chlorophytum rhizopendulum]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 29 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 82
Score = 30.4 bits (67), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 82 YVPAGLIWKTGKDMQQQTVFI 102
>gb|AEX94352.1| RNA polymerase beta subunit (chloroplast) [Oziroe biflora]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebouria cordifolia]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
gi|372481304|gb|AEX94327.1| RNA polymerase beta subunit
(chloroplast) [Hosta ventricosa]
gi|578888858|gb|AHI16741.1| RNA polymerase beta subunit
(chloroplast) (chloroplast) [Cypripedium macranthos]
Length = 1070
Score = 70.5 bits (171), Expect(2) = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>ref|YP_009059511.1| RNA polymerase beta subunit [Iris gatesii]
gi|685161354|gb|AIN78998.1| RNA polymerase beta subunit
[Iris gatesii]
Length = 1070
Score = 68.9 bits (167), Expect(2) = 4e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
++GLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NRGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 32.0 bits (71), Expect(2) = 4e-13
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG EMQQ +I+I
Sbjct: 81 YVPAGLIWKTGREMQQQTIFI 101
>gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera]
Length = 1069
Score = 70.5 bits (171), Expect(2) = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQKTVFI 101
>gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe parviflora]
Length = 1077
Score = 69.3 bits (168), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGL+EEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 36 NQGLSEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 89
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 89 YVPAGLIWKTGRDMQQQTVFI 109
>gb|AEX94370.1| RNA polymerase beta subunit (chloroplast) [Xanthorrhoea preissii]
Length = 1070
Score = 69.3 bits (168), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGL+EEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLSEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>gb|AEX94345.1| RNA polymerase beta subunit (chloroplast) [Kniphofia linearifolia]
Length = 1070
Score = 69.3 bits (168), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGL+EEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLSEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>gb|AEX94343.1| RNA polymerase beta subunit (chloroplast) [Asphodeline damascena]
Length = 1070
Score = 69.3 bits (168), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGL+EEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLSEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>gb|AEX94342.1| RNA polymerase beta subunit (chloroplast) [Aloe vera]
Length = 1070
Score = 69.3 bits (168), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGL+EEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLSEEFHKFPKMEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLIWKTGRDMQQQTVFI 101
>gb|AEX94365.1| RNA polymerase beta subunit (chloroplast) [Brodiaea californica]
Length = 1070
Score = 68.9 bits (167), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGL EEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 28 NQGLVEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 30.8 bits (68), Expect(2) = 8e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +I+I
Sbjct: 81 YVPAGLIWKTGRDMQQQTIFI 101
>gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyline australis]
Length = 1070
Score = 68.9 bits (167), Expect(2) = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 6 DQGLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
+QGLAEEFH F K EDRDQE+E+ L VE+YQLV+PL++ER + YSS LY
Sbjct: 28 NQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIEERDAVYESLTYSSELY 81
Score = 30.8 bits (68), Expect(2) = 8e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG +MQQ +++I
Sbjct: 81 YVPAGLILKTGRDMQQQTVFI 101
>gb|AEX94353.1| RNA polymerase beta subunit (chloroplast) [Iris tenax]
Length = 1070
Score = 68.2 bits (165), Expect(2) = 8e-13
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +3
Query: 12 GLAEEFH*FTKFEDRDQEVEYYLLVEKYQLVDPLVKERKLCMDHSHYSS*LY 167
GLAEEFH F K EDRDQE+E+ L VE+YQLV+PL+KER + YSS LY
Sbjct: 30 GLAEEFHKFPKIEDRDQEMEFQLFVERYQLVEPLIKERDAVYESLTYSSELY 81
Score = 31.6 bits (70), Expect(2) = 8e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 163 YTPTGLICKTGGEMQQPSIYI 225
Y P GLI KTG EMQQ +++I
Sbjct: 81 YVPAGLIWKTGREMQQQTVFI 101