BLASTX nr result

ID: Anemarrhena21_contig00045078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00045078
         (266 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          75   2e-11
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    75   2e-11
gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    70   7e-10
gb|ABD63198.1| gag/pol polyprotein, related [Asparagus officinalis]    56   8e-06

>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 43/61 (70%)
 Frame = +2

Query: 80  PKGKPIDYYHMTRRGLGYVTPPCLSDNEVELAANGSHSSDTESWDSDVSVGEVFRNLSVN 259
           P+GKP DYY  T RG+GYVTPP  S+NE+       HSS   S++SDVS+G  F+NL+VN
Sbjct: 5   PEGKPPDYYQKTGRGMGYVTPPPASENEISNYLRHDHSSGISSYESDVSIGPFFKNLTVN 64

Query: 260 M 262
           M
Sbjct: 65  M 65


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +2

Query: 77  APKGKPIDYYHMTRRGLGYVTPPCLSDNEVELAANGSHSSDTESWDSDVSVGEVFRNLSV 256
           AP+GKP DYYH TR GLGYVT P  S++E+      +HSS   S +SDVSVG  F++L+V
Sbjct: 508 APEGKPQDYYHKTRSGLGYVTTPSASEDEISNYLGQNHSSRISSCESDVSVGLFFKSLTV 567

Query: 257 NMT 265
           NMT
Sbjct: 568 NMT 570


>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   KMGYDF-QXXXXXXXXXXXXXXAQPKAPKGKPIDYYHMTRRGLGYVTPP---CLSDNEVE 169
           K+GYDF +                   P+GKP DYYH T RGLGY +PP   C    E  
Sbjct: 7   KIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGYESPPLIWCFEATEES 66

Query: 170 LAANGSHSSDTESWDSDVSVGEVFRNLSVNMT 265
             +  + SS++  WDSDVS G VF+ L +NMT
Sbjct: 67  EGSFTNSSSESNYWDSDVSTGAVFKELMINMT 98


>gb|ABD63198.1| gag/pol polyprotein, related [Asparagus officinalis]
          Length = 313

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +2

Query: 80  PKGKPIDYYHMTRRGLGYVTPP----CLSDNEVELAANGSHSSDTESWDSDVSVGEVFRN 247
           PKG+P  Y+  +RRGLGY +      C    +   A +   SS + +WDSDVSVG++F++
Sbjct: 9   PKGRPSKYFSKSRRGLGYASSSSELCCNISEDSGGARSDDQSSTSSAWDSDVSVGDLFKD 68

Query: 248 LSVNM 262
           L VNM
Sbjct: 69  LIVNM 73


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