BLASTX nr result
ID: Anemarrhena21_contig00044819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00044819
(435 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 72 2e-23
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 70 1e-22
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 66 1e-20
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 71 3e-20
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 71 9e-20
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 69 1e-19
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 68 2e-19
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 66 3e-19
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 66 3e-19
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 66 3e-19
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 66 3e-19
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 67 3e-19
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 72 6e-19
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 63 6e-19
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 69 8e-19
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 67 2e-18
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 65 3e-18
gb|AFB73912.1| polyprotein [Citrus sinensis] 65 4e-18
gb|AFB73911.1| polyprotein [Citrus sinensis] 65 4e-18
emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera] 62 2e-17
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 71.6 bits (174), Expect(2) = 2e-23
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G L+E I+MK PE FV K D+VC LK+SL K+S R YKR D+FM+ + +Y
Sbjct: 1034 GNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYD 1093
Query: 361 NCAYFKPYKDVSSIYLL 411
+C YFK D S IYLL
Sbjct: 1094 SCVYFKTLPDGSFIYLL 1110
Score = 63.9 bits (154), Expect(2) = 2e-23
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ KG+ KE ++YNE+FSPVVKH S +VLLA+V +E +Q+++KT FL GN E
Sbjct: 981 RLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLE 1037
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 69.7 bits (169), Expect(2) = 1e-22
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M P+ F GKE++VC LK+SL K+S R YKR DS+M+K YT Y
Sbjct: 911 GELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYD 970
Query: 361 NCAYFKPYKDVSSIYLL 411
C Y+ D S IYL+
Sbjct: 971 CCVYYNRLNDDSFIYLV 987
Score = 63.2 bits (152), Expect(2) = 1e-22
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
+V +G+ +E ++YNEIFSPVV+H+S +VLLA+V Q +E EQ+++KT FL G E
Sbjct: 858 RVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELE 914
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 66.2 bits (160), Expect(2) = 1e-20
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I M PE FV GKE + C LK+SL K+S R YKR DSFM++ + Y
Sbjct: 1024 GELEEDILMSQPEGFVVPGKEKFACSLKKSLYGLKQSPRQWYKRFDSFMVEHGFDRSPYD 1083
Query: 361 NCAYFKPYKDVSSIYLL 411
C Y +D S IYLL
Sbjct: 1084 CCVYHSKVEDGSYIYLL 1100
Score = 60.1 bits (144), Expect(2) = 1e-20
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ KG+ +E ++YNEIFSPVV+H+S +VLLA+V +E EQ+++KT FL G E
Sbjct: 971 RLVAKGFSQREGVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELE 1027
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 71.2 bits (173), Expect(2) = 3e-20
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKEDYVC LK+SL K+S R YKR DSFM+ + E+
Sbjct: 926 GELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFD 985
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 986 SCVYIK-FVNGSPIYLL 1001
Score = 53.5 bits (127), Expect(2) = 3e-20
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 12 IKVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
+++ KG+ ++YN++FSPVVKHSS + ++V +E EQ+++KT FL G E
Sbjct: 872 VRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELE 929
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 71.2 bits (173), Expect(2) = 9e-20
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKEDYVC LK+SL K+S R YKR DSFM+ + E+
Sbjct: 926 GELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFD 985
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 986 SCVYIK-FVNGSPIYLL 1001
Score = 52.0 bits (123), Expect(2) = 9e-20
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ KG+ ++YN++FSPVVKHSS + ++V +E EQ+++KT FL G E
Sbjct: 873 RLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELE 929
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 68.9 bits (167), Expect(2) = 1e-19
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+ I+M PE F+ GKEDYVC LK+SL K+S R YKR DSFM+ + E+
Sbjct: 817 GELEVEIYMDQPEGFIVPGKEDYVCKLKRSLDGLKQSPRQWYKRFDSFMLSHGFKRSEFD 876
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 877 SCVYIK-FINGSPIYLL 892
Score = 53.9 bits (128), Expect(2) = 1e-19
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +3
Query: 27 KGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWEVK 191
KG+ ++YN++FSPVVKHSS + ++V +E EQ+++KT FL G EV+
Sbjct: 768 KGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTTFLHGELEVE 822
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 67.8 bits (164), Expect(2) = 2e-19
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E IFM+ P+ F+ GKE+ VC LK+SL K+S R YKR D FM Y+ ++
Sbjct: 578 GELEEEIFMQQPKGFIVKGKENQVCLLKRSLYGLKQSPRQWYKRFDKFMTSVGYSRSKFD 637
Query: 361 NCAYFKPYKDVSSIYLL 411
NC Y + + S +YLL
Sbjct: 638 NCVYMRKLTNGSYVYLL 654
Score = 54.7 bits (130), Expect(2) = 2e-19
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +3
Query: 27 KGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
K Y +E M++NEIFSP+VKH+S +VLLALV +E Q+++ FL G E
Sbjct: 529 KAYTQREGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELE 581
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 66.2 bits (160), Expect(2) = 3e-19
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKE YVC LK+SL K+S R KR DSFM+ S+ +Y
Sbjct: 937 GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 996
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 997 SCVYIK-HVNGSPIYLL 1012
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ +GY ++YN++FSPVVKHSS + L++V + +E EQ+++KT FL G E
Sbjct: 884 RLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELE 940
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 66.2 bits (160), Expect(2) = 3e-19
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKE YVC LK+SL K+S R KR DSFM+ S+ +Y
Sbjct: 939 GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 998
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 999 SCVYIK-HVNGSPIYLL 1014
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ +GY ++YN++FSPVVKHSS + L++V + +E EQ+++KT FL G E
Sbjct: 886 RLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELE 942
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 66.2 bits (160), Expect(2) = 3e-19
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKE YVC LK+SL K+S R KR DSFM+ S+ +Y
Sbjct: 937 GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 996
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 997 SCVYIK-HVNGSPIYLL 1012
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ +GY ++YN++FSPVVKHSS + L++V + +E EQ+++KT FL G E
Sbjct: 884 RLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELE 940
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 66.2 bits (160), Expect(2) = 3e-19
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKE YVC LK+SL K+S R KR DSFM+ S+ +Y
Sbjct: 937 GELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYD 996
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 997 SCVYIK-HVNGSPIYLL 1012
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ +GY ++YN++FSPVVKHSS + L++V + +E EQ+++KT FL G E
Sbjct: 884 RLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELE 940
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 67.4 bits (163), Expect(2) = 3e-19
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKED VC LK+SL K+S R YKR DSFM+ + E+
Sbjct: 872 GELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFD 931
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 932 SCVYIK-FVNGSHIYLL 947
Score = 53.9 bits (128), Expect(2) = 3e-19
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ KG+ ++YN++FSPVVKHSS + +V +E EQ+++KTIFL G E
Sbjct: 819 RLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELE 875
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 71.6 bits (174), Expect(2) = 6e-19
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G L+E I+MK PE FV K D+VC LK+SL K+S R YKR D+FM+ + +Y
Sbjct: 1235 GNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYD 1294
Query: 361 NCAYFKPYKDVSSIYLL 411
+C YFK D S IYLL
Sbjct: 1295 SCVYFKTLPDGSFIYLL 1311
Score = 48.9 bits (115), Expect(2) = 6e-19
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 63 EIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++FSPVVKH S +VLLA+V +E +Q+++KT FL GN E
Sbjct: 1198 KVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLE 1238
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 62.8 bits (151), Expect(2) = 6e-19
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ +G+ +E +++NEIFSPVVKHSS ++LLA+V +E EQ+++KT FL GN E
Sbjct: 881 RLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLE 937
Score = 57.8 bits (138), Expect(2) = 6e-19
Identities = 33/77 (42%), Positives = 39/77 (50%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G L+E I M PE F KEDYVC L +SL K+S R Y+R D FM+ Y Y
Sbjct: 934 GNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYD 993
Query: 361 NCAYFKPYKDVSSIYLL 411
+C YF YLL
Sbjct: 994 SCVYFGGSDQGGVAYLL 1010
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 69.3 bits (168), Expect(2) = 8e-19
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L++ I+M PE F+ GKEDYVC LK+SL K+S R YKR DSFM+ + E+
Sbjct: 259 GELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKWSEFD 318
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 319 SCVYIK-FVNGSPIYLL 334
Score = 50.8 bits (120), Expect(2) = 8e-19
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
++ KG+ ++YN++FSPVVKHSS + ++V +E +Q+++KT FL G E
Sbjct: 206 RLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELE 262
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 67.0 bits (162), Expect(2) = 2e-18
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G L+E I+MK P+ F GKE++VC L +SL K+S R Y+R DSFM+ +T Y
Sbjct: 788 GDLEEEIYMKQPKGFEVEGKEEHVCRLVKSLYGLKQSPRQWYRRFDSFMLAHEFTRSSYD 847
Query: 361 NCAYFKPYKDVSSIYLLC----MLMIC 429
+C Y+K S IYLL ML+ C
Sbjct: 848 SCVYYKELVSGSFIYLLLYVDDMLVAC 874
Score = 52.0 bits (123), Expect(2) = 2e-18
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
+V + + E ++++E+F PVVKHSS +VLLAL + +E Q+++KT FL G+ E
Sbjct: 735 RVVARRFTQVEGVDFHEVFPPVVKHSSIRVLLALEAMEDLELHQLDVKTAFLHGDLE 791
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 64.7 bits (156), Expect(2) = 3e-18
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F+ GKE YVC LK+S K+S R YKR D FM+ + E+
Sbjct: 610 GELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQWYKRFDLFMLSHGFKRSEFD 669
Query: 361 NCAYFKPYKDVSSIYLL 411
+C Y K + + S IYLL
Sbjct: 670 SCVYIK-FVNGSPIYLL 685
Score = 53.5 bits (127), Expect(2) = 3e-18
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 15 KVSCKGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
K+ KG+ ++YN++FSPVVKHSS + ++V +E EQ+++KT FL G E
Sbjct: 557 KLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELE 613
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 64.7 bits (156), Expect(2) = 4e-18
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F + GKE+ VC L +SL K++ R YKR DSF+M Y
Sbjct: 911 GELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSD 970
Query: 361 NCAYFKPYKDVSSIYLL 411
+CAY+K ++D I LL
Sbjct: 971 HCAYYKRFEDNDFIILL 987
Score = 53.1 bits (126), Expect(2) = 4e-18
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 27 KGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
KGY KE +++NEIFSPVV+ ++ +++LA+ T + EQ+++KT FL G E
Sbjct: 862 KGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELE 914
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 64.7 bits (156), Expect(2) = 4e-18
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G+L+E I+M PE F + GKE+ VC L +SL K++ R YKR DSF+M Y
Sbjct: 911 GELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSD 970
Query: 361 NCAYFKPYKDVSSIYLL 411
+CAY+K ++D I LL
Sbjct: 971 HCAYYKRFEDNDFIILL 987
Score = 53.1 bits (126), Expect(2) = 4e-18
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 27 KGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
KGY KE +++NEIFSPVV+ ++ +++LA+ T + EQ+++KT FL G E
Sbjct: 862 KGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELE 914
>emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera]
Length = 575
Score = 62.0 bits (149), Expect(2) = 2e-17
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 181 GKLKETIFMK*PESFVKLGKEDYVCDLKQSLSV*KRSSRD*YKRVDSFMMKASYTHCEYY 360
G L+E ++M PE F+ G+E+ VC L++SL K++ R YK+ D+FM + + CE
Sbjct: 203 GDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEAD 262
Query: 361 NCAYFKPYKDVSSIYLLCMLM 423
+C YFK + + I LL M
Sbjct: 263 HCCYFKSFDNSYIILLLYFAM 283
Score = 53.5 bits (127), Expect(2) = 2e-17
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 27 KGYVPKERMNYNEIFSPVVKHSSFQVLLALVPTQGME*EQINIKTIFLRGNWE 185
KG+ KE ++Y EIFSPVVK S+ +++L +V + + EQ+++KT FL G+ E
Sbjct: 154 KGFQXKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLE 206