BLASTX nr result

ID: Anemarrhena21_contig00044692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00044692
         (511 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006285397.1| hypothetical protein CARUB_v10006802mg, part...    63   7e-08
ref|XP_006283229.1| hypothetical protein CARUB_v10004260mg [Caps...    59   1e-06
ref|XP_010439929.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   2e-06
ref|XP_010439928.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   2e-06
ref|XP_008238245.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   3e-06

>ref|XP_006285397.1| hypothetical protein CARUB_v10006802mg, partial [Capsella rubella]
           gi|482554102|gb|EOA18295.1| hypothetical protein
           CARUB_v10006802mg, partial [Capsella rubella]
          Length = 652

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 49/127 (38%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
 Frame = -1

Query: 343 LPPSPLSFETGLASPKEENMANSDC----------SPFLLGCDSDPLSPKEEKMRISDSA 194
           L PSP+  +      + E M  S               L GC SD   P+E      D  
Sbjct: 79  LVPSPIDLDHDEFGSESERMVESQVRIRSTSQAVDDVILDGCSSD--DPRESNR---DWT 133

Query: 193 PLLLGYNSDSMSPKE--EETKRSGFQSFLLDSDSDL--VGAGLRNIDNTCYLNSVLQCII 26
           P   GY SD  + K+   ET  SGF    L  D  +  VGAGL N+ NTC+LNSVLQC  
Sbjct: 134 P---GYGSDDENSKKGCSETLLSGFTLKPLKIDEPVTGVGAGLWNLGNTCFLNSVLQCFT 190

Query: 25  HTVPMVK 5
           HTVP++K
Sbjct: 191 HTVPLLK 197


>ref|XP_006283229.1| hypothetical protein CARUB_v10004260mg [Capsella rubella]
           gi|482551934|gb|EOA16127.1| hypothetical protein
           CARUB_v10004260mg [Capsella rubella]
          Length = 706

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
 Frame = -1

Query: 337 PSPLSFETGLASPKEENMANS----DCSPFLL---------GCDSDPLSPKEEKMRISDS 197
           PSP++ +      + E M  S    DC+   L          C SD   P+E     + +
Sbjct: 85  PSPINLDHDEFGSESERMVESQVRIDCTWQGLDDTDDVIWDACPSD--DPRESNRDWTPN 142

Query: 196 APLLLGYNSDSMSPKEEETKRSGFQS--FLLDSDSDLVGAGLRNIDNTCYLNSVLQCIIH 23
                G + D+   +  ET  SGF     ++D     VGAGL N+ NTC+LNSVLQC  H
Sbjct: 143 VSPGCGSDDDNSKQECTETLVSGFMQRPLMIDEPVTGVGAGLWNLGNTCFLNSVLQCFTH 202

Query: 22  TVPMVK 5
           TVP+V+
Sbjct: 203 TVPLVE 208


>ref|XP_010439929.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like isoform X2
           [Camelina sativa]
          Length = 695

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
 Frame = -1

Query: 337 PSPLSFETGLASPKEENMANSDCSPFLLGCDSDPLS--------------PKEEKMRISD 200
           PSP++F+ G      + M  S      +G +S  L               P+E     + 
Sbjct: 69  PSPINFDYGEFGNGTQRMLESQVR---IGSNSQTLDDLDDVIWDGSSSDDPRENSQPWTP 125

Query: 199 SAPLLLGYNSDSMSPKE-EETKRSGFQSFLLDSDSDL--VGAGLRNIDNTCYLNSVLQCI 29
           +     G + D  S KE  E   SGF    L  D  +  VGAGL N+ NTC+LNSVLQC 
Sbjct: 126 NVSPGFGSDDDDNSKKECNEPLLSGFMQRPLKIDEPVTGVGAGLWNLGNTCFLNSVLQCF 185

Query: 28  IHTVPMVK 5
            HTVP+++
Sbjct: 186 THTVPLIE 193


>ref|XP_010439928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like isoform X1
           [Camelina sativa]
          Length = 698

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
 Frame = -1

Query: 337 PSPLSFETGLASPKEENMANSDCSPFLLGCDSDPLS--------------PKEEKMRISD 200
           PSP++F+ G      + M  S      +G +S  L               P+E     + 
Sbjct: 69  PSPINFDYGEFGNGTQRMLESQVR---IGSNSQTLDDLDDVIWDGSSSDDPRENSQPWTP 125

Query: 199 SAPLLLGYNSDSMSPKE-EETKRSGFQSFLLDSDSDL--VGAGLRNIDNTCYLNSVLQCI 29
           +     G + D  S KE  E   SGF    L  D  +  VGAGL N+ NTC+LNSVLQC 
Sbjct: 126 NVSPGFGSDDDDNSKKECNEPLLSGFMQRPLKIDEPVTGVGAGLWNLGNTCFLNSVLQCF 185

Query: 28  IHTVPMVK 5
            HTVP+++
Sbjct: 186 THTVPLIE 193


>ref|XP_008238245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Prunus
           mume]
          Length = 722

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -1

Query: 340 PPSPLSFETGLASPKEENMANSDCSPFLLGCDSDPLSPKEEKMRISDSAPLLLGYNSDSM 161
           PPSPL             +  +D S +    +SDP S      R S SAP    ++S   
Sbjct: 73  PPSPLK------------IVGNDLSNY----ESDPHSEFSGPSRWSSSAP---SWSSRWS 113

Query: 160 SPKEEETKRSGFQSF-LLDSDSDLVGAGLRNIDNTCYLNSVLQCIIHTVPMVK 5
           S   +E+  S    F + ++   +VGAGL N+ NTC++N++LQC  HTVP+V+
Sbjct: 114 SNSTKESVISSDSQFSICETKPSMVGAGLANLGNTCFMNAILQCFTHTVPLVE 166


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