BLASTX nr result
ID: Anemarrhena21_contig00044169
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00044169
(622 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010028034.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 42 2e-08
gb|KCW54696.1| hypothetical protein EUGRSUZ_I00636 [Eucalyptus g... 42 2e-08
ref|XP_010274720.1| PREDICTED: pentatricopeptide repeat-containi... 41 4e-08
ref|XP_008809829.1| PREDICTED: pentatricopeptide repeat-containi... 45 1e-07
ref|XP_009339694.1| PREDICTED: pentatricopeptide repeat-containi... 42 1e-06
ref|XP_010916507.1| PREDICTED: pentatricopeptide repeat-containi... 41 1e-06
ref|XP_008389202.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 40 2e-06
ref|XP_010424924.1| PREDICTED: pentatricopeptide repeat-containi... 40 6e-06
ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar... 41 8e-06
ref|XP_006290812.1| hypothetical protein CARUB_v10016917mg [Caps... 40 8e-06
>ref|XP_010028034.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01510, mitochondrial [Eucalyptus grandis]
Length = 592
Score = 41.6 bits (96), Expect(3) = 2e-08
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
RKLFD MHKP F L NTLIRGYVKN++
Sbjct: 71 RKLFDEMHKPRVF-LWNTLIRGYVKNDM 97
Score = 39.7 bits (91), Expect(3) = 2e-08
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = -3
Query: 296 KSAFASLLKA-NSNPEQLEQIHALLLTTGFAQKNS 195
K A+LLKA +S P QL QIHAL+LT+G + KNS
Sbjct: 18 KQTLATLLKACSSQPHQLTQIHALVLTSGLSVKNS 52
Score = 23.5 bits (49), Expect(3) = 2e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 81 LEGMSRTISPPDVLSLYLRMHSFNVRP 1
+ G + P + +SLY RM S VRP
Sbjct: 89 IRGYVKNDMPVESVSLYGRMSSLGVRP 115
>gb|KCW54696.1| hypothetical protein EUGRSUZ_I00636 [Eucalyptus grandis]
Length = 571
Score = 41.6 bits (96), Expect(3) = 2e-08
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
RKLFD MHKP F L NTLIRGYVKN++
Sbjct: 71 RKLFDEMHKPRVF-LWNTLIRGYVKNDM 97
Score = 39.7 bits (91), Expect(3) = 2e-08
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = -3
Query: 296 KSAFASLLKA-NSNPEQLEQIHALLLTTGFAQKNS 195
K A+LLKA +S P QL QIHAL+LT+G + KNS
Sbjct: 18 KQTLATLLKACSSQPHQLTQIHALVLTSGLSVKNS 52
Score = 23.5 bits (49), Expect(3) = 2e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 81 LEGMSRTISPPDVLSLYLRMHSFNVRP 1
+ G + P + +SLY RM S VRP
Sbjct: 89 IRGYVKNDMPVESVSLYGRMSSLGVRP 115
>ref|XP_010274720.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Nelumbo nucifera]
Length = 638
Score = 41.2 bits (95), Expect(3) = 4e-08
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -3
Query: 317 SPFLLSPKSAFASLLKA-NSNPEQLEQIHALLLTTGFAQKNSXXXXXXXXXXLIGNM 150
+P L K AF SL+ ++ P QL+QIHALLLT G + KNS L+G+M
Sbjct: 57 NPSPLFTKPAFTSLINCCSTQPNQLKQIHALLLTAGLSIKNSLITQILSSLTLLGDM 113
Score = 40.4 bits (93), Expect(3) = 4e-08
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
R++FD MHKP F L NTLI+GYVKNNL
Sbjct: 117 RQIFDEMHKPRAF-LWNTLIKGYVKNNL 143
Score = 21.9 bits (45), Expect(3) = 4e-08
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 81 LEGMSRTISPPDVLSLYLRMHSFNVRP 1
++G + P + +++Y +MH RP
Sbjct: 135 IKGYVKNNLPVEAIAVYQKMHCLGARP 161
>ref|XP_008809829.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial-like [Phoenix dactylifera]
Length = 314
Score = 44.7 bits (104), Expect(3) = 1e-07
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = -3
Query: 347 TTTLLNLIGRSPFLLSPKSAFASLLKANSNPEQLEQIHALLLTTGFAQKNS 195
T T L + SP + K+ FA+LL++ S L+QIHALLLTTG + KNS
Sbjct: 13 TLTHLRSLHASPPPPTDKAGFAALLQSASRRAHLKQIHALLLTTGLSHKNS 63
Score = 36.2 bits (82), Expect(3) = 1e-07
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
R+LFD MHKP F L NTLIR Y ++NL
Sbjct: 82 RRLFDDMHKPRVF-LWNTLIRAYARSNL 108
Score = 21.2 bits (43), Expect(3) = 1e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 81 LEGMSRTISPPDVLSLYLRMHSFNVRP 1
+ +R+ P D ++LY M VRP
Sbjct: 100 IRAYARSNLPGDAIALYHDMRRLGVRP 126
>ref|XP_009339694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Pyrus x bretschneideri]
Length = 618
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = -3
Query: 407 IASLSTVMFPFSLIPRAHHPTTTLLNLIG-RSPFLLSPKSAFASLLKA-NSNPEQLEQIH 234
I +++ + FP L P P ++L+ + +P + K A +LL++ +++P QL+QIH
Sbjct: 8 ITTMAKLCFPLPLKPSL--PFSSLVQIQNPANPRVGLTKQALTALLQSCSAHPNQLKQIH 65
Query: 233 ALLLTTGFAQKNSXXXXXXXXXXLIGNM 150
A++LTTG + KNS L+G+M
Sbjct: 66 AVVLTTGLSIKNSLITELLTNFALLGDM 93
Score = 38.1 bits (87), Expect(2) = 1e-06
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNLSARCAV 38
R+LFD MHKP F L NTLIR YVKN + A+
Sbjct: 97 RQLFDQMHKPRVF-LWNTLIRAYVKNRIFMEAAL 129
>ref|XP_010916507.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Elaeis guineensis]
Length = 598
Score = 41.2 bits (95), Expect(3) = 1e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -3
Query: 296 KSAFASLLKANSNPEQLEQIHALLLTTGFAQKNS 195
K+ FA LL++ S+ L+QIHALLLTTG + KNS
Sbjct: 31 KAGFAVLLRSASSRPHLKQIHALLLTTGLSHKNS 64
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
R LFD MHKP F L NTLIR Y + NL
Sbjct: 83 RHLFDDMHKPRVF-LWNTLIRAYARTNL 109
Score = 22.7 bits (47), Expect(3) = 1e-06
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 81 LEGMSRTISPPDVLSLYLRMHSFNVRP 1
+ +RT P D ++LY M VRP
Sbjct: 101 IRAYARTNLPGDAIALYHDMRRLGVRP 127
>ref|XP_008389202.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01510, mitochondrial [Malus domestica]
Length = 618
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = -3
Query: 407 IASLSTVMFPFSLIPRAHHPTTTLLNLIGRSPFLLSPKSAFASLLKANSNPEQLEQIHAL 228
I ++ + FP L P + + P L+ ++ A L +++P QL+QIH +
Sbjct: 8 IXIMAKLCFPLPLKPSLPFSSLVQIQNPANPPVGLTKQALTALLQSCSAHPNQLKQIHXV 67
Query: 227 LLTTGFAQKNSXXXXXXXXXXLIGNM 150
+LTTG + KNS L+G+M
Sbjct: 68 VLTTGLSIKNSLLTQLLTNXALLGDM 93
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNLSARCAV 38
R+LFD MHKP F L NTLIR YVKN + A+
Sbjct: 97 RQLFDQMHKPRVF-LWNTLIRAYVKNRIFTEAAL 129
>ref|XP_010424924.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Camelina sativa]
Length = 584
Score = 40.4 bits (93), Expect(2) = 6e-06
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -3
Query: 296 KSAFASLLKANSN-PEQLEQIHALLLTTGFAQKNSXXXXXXXXXXLIGNM 150
K + LL+A+S+ P QL++IHA++L TGF++KNS LIG+M
Sbjct: 10 KQMLSELLRASSSKPRQLKKIHAIVLRTGFSEKNSLLTQLLENLVLIGDM 59
Score = 36.6 bits (83), Expect(2) = 6e-06
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
R LFD MHKP F L NTL +GYVKN +
Sbjct: 63 RHLFDEMHKPRIF-LWNTLFKGYVKNQI 89
>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein
[Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 584
Score = 40.8 bits (94), Expect(2) = 8e-06
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -3
Query: 296 KSAFASLLKANSN-PEQLEQIHALLLTTGFAQKNSXXXXXXXXXXLIGNM 150
K + LL+A+S+ P+QL++IHA++L TGF++KNS +IG+M
Sbjct: 10 KQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDM 59
Score = 35.8 bits (81), Expect(2) = 8e-06
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
R++FD MHKP F L NTL +GYV+N L
Sbjct: 63 RQVFDEMHKPRIF-LWNTLFKGYVRNQL 89
>ref|XP_006290812.1| hypothetical protein CARUB_v10016917mg [Capsella rubella]
gi|482559519|gb|EOA23710.1| hypothetical protein
CARUB_v10016917mg [Capsella rubella]
Length = 584
Score = 39.7 bits (91), Expect(2) = 8e-06
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -3
Query: 296 KSAFASLLKANSN-PEQLEQIHALLLTTGFAQKNSXXXXXXXXXXLIGNM 150
K + LL+A+S+ P QL++IHA++L TGF++KNS L+G+M
Sbjct: 10 KQMLSELLRASSSKPNQLKKIHAIVLRTGFSEKNSLLTQLLENLVLLGDM 59
Score = 37.0 bits (84), Expect(2) = 8e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -1
Query: 139 RKLFDSMHKPCFFPL*NTLIRGYVKNNL 56
R+LFD MHKP F L N+L +GYVKN+L
Sbjct: 63 RQLFDEMHKPRIF-LWNSLFKGYVKNHL 89