BLASTX nr result
ID: Anemarrhena21_contig00043537
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00043537
(555 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009155542.1| photosystem I assembly protein Ycf3 (chlorop... 85 2e-14
ref|XP_008779519.1| PREDICTED: photosystem I assembly protein Yc... 85 2e-14
ref|YP_052750.1| photosystem I assembly protein Ycf3 (chloroplas... 85 2e-14
ref|NP_039384.1| photosystem I assembly protein Ycf3 [Oryza sati... 85 2e-14
prf||1603356AC intron-containing ORF 170 [Oryza sativa] 85 2e-14
ref|YP_005089148.1| ycf3 gene product [Rhynchoryza subulata] gi|... 85 2e-14
ref|YP_005088011.1| ycf3 gene product [Leersia tisserantii] gi|3... 85 2e-14
sp|P0C517.1|YCF3_ORYSI RecName: Full=Photosystem I assembly prot... 85 2e-14
gb|ABC02753.1| Ycf3 protein, partial (chloroplast) [Phyllostachy... 85 2e-14
ref|YP_009034098.1| photosystem I assembly protein Ycf3 (plastid... 85 2e-14
ref|YP_009156877.1| photosystem I assembly protein Ycf3 (plastid... 84 5e-14
gb|AGP50756.1| hypothetical chloroplast RF34 (chloroplast) [Hord... 84 5e-14
gb|AEZ48790.1| photosystem I assembly protein Ycf3, partial [Spa... 84 5e-14
ref|YP_874654.1| photosystem I assembly protein ycf3 (chloroplas... 84 5e-14
ref|YP_009142051.1| Ycf3 (chloroplast) [Fagopyrum tataricum] gi|... 83 7e-14
ref|YP_009073015.1| hypothetical chloroplast RF34 [Elytrophorus ... 83 7e-14
gb|AAB30283.2| IRF170 (chloroplast) [Zea mays subsp. mays] 83 7e-14
sp|P27324.2|YCF3_MAIZE RecName: Full=Photosystem I assembly prot... 83 7e-14
ref|YP_009155213.1| photosystem I assembly protein Ycf3 (plastid... 83 7e-14
ref|YP_740118.1| photosystem I assembly protein ycf3 [Daucus car... 83 7e-14
>ref|YP_009155542.1| photosystem I assembly protein Ycf3 (chloroplast) [Oryza barthii]
gi|884997859|ref|YP_009155624.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza glumipatula]
gi|884997943|ref|YP_009155707.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza longistaminata]
gi|884998027|ref|YP_009155790.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza officinalis]
gi|761231225|gb|AJP33634.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza barthii]
gi|761231308|gb|AJP33716.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza barthii]
gi|761231391|gb|AJP33798.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza barthii]
gi|761231474|gb|AJP33880.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza barthii]
gi|761231558|gb|AJP33963.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza glaberrima]
gi|761231640|gb|AJP34044.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza glaberrima]
gi|761231724|gb|AJP34127.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza glumipatula]
gi|761231808|gb|AJP34210.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza longistaminata]
gi|761231892|gb|AJP34293.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza longistaminata]
gi|761231976|gb|AJP34376.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza officinalis]
Length = 170
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|XP_008779519.1| PREDICTED: photosystem I assembly protein Ycf3 [Phoenix
dactylifera]
Length = 75
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|YP_052750.1| photosystem I assembly protein Ycf3 (chloroplast) [Oryza nivara]
gi|68053141|sp|Q6ENH3.1|YCF3_ORYNI RecName:
Full=Photosystem I assembly protein Ycf3
gi|49614996|dbj|BAD26779.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza nivara]
Length = 170
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|NP_039384.1| photosystem I assembly protein Ycf3 [Oryza sativa Japonica Group]
gi|669081|emb|CAA33997.1| unnamed protein product
(chloroplast) [Oryza sativa Japonica Group]
Length = 169
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>prf||1603356AC intron-containing ORF 170 [Oryza sativa]
Length = 170
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|YP_005089148.1| ycf3 gene product [Rhynchoryza subulata]
gi|669136046|ref|YP_009049270.1| hypothetical
chloroplast RF34 (chloroplast) [Oryza australiensis]
gi|346228473|gb|AEO21345.1| hypothetical chloroplast
RF34 [Rhynchoryza subulata] gi|353685054|gb|AER12819.1|
hypothetical chloroplast RF34 (chloroplast) [Oryza
sativa Indica Group] gi|353685142|gb|AER12906.1|
hypothetical chloroplast RF34 (chloroplast) [Oryza
sativa Indica Group] gi|555945989|gb|AGZ19215.1|
hypothetical chloroplast RF34 (chloroplast) [Oryza
rufipogon] gi|662117290|gb|AIE44576.1| hypothetical
chloroplast RF34 (chloroplast) [Oryza australiensis]
Length = 172
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|YP_005088011.1| ycf3 gene product [Leersia tisserantii] gi|346228305|gb|AEO21179.1|
hypothetical chloroplast RF34 [Leersia tisserantii]
Length = 172
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>sp|P0C517.1|YCF3_ORYSI RecName: Full=Photosystem I assembly protein Ycf3
gi|148887458|sp|P12203.3|YCF3_ORYSJ RecName:
Full=Photosystem I assembly protein Ycf3
gi|148897905|sp|P0C516.1|YCF3_ORYSA RecName:
Full=Photosystem I assembly protein Ycf3
Length = 170
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>gb|ABC02753.1| Ycf3 protein, partial (chloroplast) [Phyllostachys edulis]
Length = 41
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|YP_009034098.1| photosystem I assembly protein Ycf3 (plastid) [Oryza glaberrima]
gi|56784286|dbj|BAD81968.1| Chloroplast photosystem I
assembly protein Ycf3 [Oryza sativa Japonica Group]
gi|634743461|gb|AHZ60712.1| photosystem I assembly
protein Ycf3 [Oryza glaberrima]
Length = 169
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRD 41
>ref|YP_009156877.1| photosystem I assembly protein Ycf3 (plastid) [Hordeum jubatum]
gi|768805005|gb|AJV89784.1| photosystem I assembly
protein Ycf3 (plastid) [Hordeum jubatum]
Length = 170
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSR+NGNFIDKTFSIIANILLRIIPTTSGEK+AFTYYRD
Sbjct: 1 MPRSRVNGNFIDKTFSIIANILLRIIPTTSGEKKAFTYYRD 41
>gb|AGP50756.1| hypothetical chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
vulgare] gi|521301030|gb|AGP50832.1| hypothetical
chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
spontaneum] gi|521301111|gb|AGP50912.1| hypothetical
chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
spontaneum]
Length = 172
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSR+NGNFIDKTFSIIANILLRIIPTTSGEK+AFTYYRD
Sbjct: 1 MPRSRVNGNFIDKTFSIIANILLRIIPTTSGEKKAFTYYRD 41
>gb|AEZ48790.1| photosystem I assembly protein Ycf3, partial [Sparganium
eurycarpum]
Length = 168
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILLRIIPTTSGEK+AFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKKAFTYYRD 41
>ref|YP_874654.1| photosystem I assembly protein ycf3 (chloroplast) [Hordeum vulgare
subsp. vulgare] gi|171704520|sp|A1E9J2.1|YCF3_HORVU
RecName: Full=Photosystem I assembly protein Ycf3
gi|118201043|gb|ABK79414.1| photosystem I assembly
protein ycf3 (chloroplast) [Hordeum vulgare subsp.
vulgare]
Length = 170
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSR+NGNFIDKTFSIIANILLRIIPTTSGEK+AFTYYRD
Sbjct: 1 MPRSRVNGNFIDKTFSIIANILLRIIPTTSGEKKAFTYYRD 41
>ref|YP_009142051.1| Ycf3 (chloroplast) [Fagopyrum tataricum]
gi|723430240|gb|AIX89744.1| Ycf3 (chloroplast)
[Fagopyrum tataricum]
Length = 169
Score = 83.2 bits (204), Expect = 7e-14
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFS++ANILLRIIPTTSGEK+AFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKKAFTYYRD 41
>ref|YP_009073015.1| hypothetical chloroplast RF34 [Elytrophorus spicatus]
gi|686986023|gb|AIQ79541.1| hypothetical chloroplast
RF34 (plastid) [Elytrophorus spicatus]
Length = 170
Score = 83.2 bits (204), Expect = 7e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILL+IIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRD 41
>gb|AAB30283.2| IRF170 (chloroplast) [Zea mays subsp. mays]
Length = 170
Score = 83.2 bits (204), Expect = 7e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILL+IIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRD 41
>sp|P27324.2|YCF3_MAIZE RecName: Full=Photosystem I assembly protein Ycf3; AltName:
Full=IRF170 gi|93140420|sp|P0C160.1|YCF3_SACHY RecName:
Full=Photosystem I assembly protein Ycf3
Length = 170
Score = 83.2 bits (204), Expect = 7e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSI+ANILL+IIPTTSGEKRAFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRD 41
>ref|YP_009155213.1| photosystem I assembly protein Ycf3 (plastid) [Pastinaca
pimpinellifolia] gi|884997506|ref|YP_009155295.1|
photosystem I assembly protein Ycf3 (plastid) [Seseli
montanum] gi|156597915|gb|ABU85225.1| photosystem I
assembly protein ycf3 [Anethum graveolens]
gi|302025022|gb|ADK89864.1| hypothetical chloroplast
RF34 (chloroplast) [Crithmum maritimum]
gi|302025111|gb|ADK89952.1| hypothetical chloroplast
RF34 (chloroplast) [Petroselinum crispum]
gi|700746242|gb|AIU99021.1| photosystem I assembly
protein Ycf3 (plastid) [Pastinaca pimpinellifolia]
gi|700746345|gb|AIU99103.1| photosystem I assembly
protein Ycf3 (plastid) [Seseli montanum]
Length = 168
Score = 83.2 bits (204), Expect = 7e-14
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSIIANILLRIIPTTSGEK AFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKEAFTYYRD 41
>ref|YP_740118.1| photosystem I assembly protein ycf3 [Daucus carota]
gi|323149083|ref|YP_004222647.1| hypothetical
chloroplast RF34 (chloroplast) [Anthriscus cerefolium]
gi|122227486|sp|Q0G9W1.1|YCF3_DAUCA RecName:
Full=Photosystem I assembly protein Ycf3
gi|113200909|gb|ABI32425.1| photosystem I assembly
protein ycf3 [Daucus carota] gi|289645576|gb|ADD13639.1|
hypothetical chloroplast RF34 (chloroplast) [Anthriscus
cerefolium] gi|302024936|gb|ADK89779.1| hypothetical
chloroplast RF34 (chloroplast) [Tiedemannia filiformis
subsp. greenmannii]
Length = 168
Score = 83.2 bits (204), Expect = 7e-14
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -2
Query: 125 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKRAFTYYRD 3
MPRSRINGNFIDKTFSIIANILLRIIPTTSGEK AFTYYRD
Sbjct: 1 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKEAFTYYRD 41