BLASTX nr result

ID: Anemarrhena21_contig00042535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00042535
         (285 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    67   6e-09
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    60   6e-07

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = -2

Query: 284  KWAKFLDARFMHNRFPINYYKGSSVWLGIKRAYTVLKHDLVWSLGFNSKCNIWTDNWLGK 105
            +WA  L  RF     PI Y+  SSVW G+K   ++L+ + +W +G   + N+WT+NWLG+
Sbjct: 816  QWAVLLKRRFFSQGQPIRYFVKSSVWHGVKNHMSILRQNKLWIVGTGDRINLWTNNWLGE 875

Query: 104  GALTDFLHRPPHLDYTRLHEVSRYIVNKN 18
              +T F +  P    +   +VS  IVN N
Sbjct: 876  PLVTLF-NIDPFFHASFTGKVSEVIVNGN 903


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/87 (35%), Positives = 47/87 (54%)
 Frame = -2

Query: 284 KWAKFLDARFMHNRFPINYYKGSSVWLGIKRAYTVLKHDLVWSLGFNSKCNIWTDNWLGK 105
           +WA  +  RF+ +  P+ +Y  SS+W GIK   + +  + +W +G  +  N+WTDNWLG 
Sbjct: 353 QWAALMHHRFLKHGTPLQHYFLSSMWGGIKEHLSTISSNSIWIVGTGANINLWTDNWLGI 412

Query: 104 GALTDFLHRPPHLDYTRLHEVSRYIVN 24
             L D L+  P L       V+  IVN
Sbjct: 413 -RLVDSLNISPTLHTKFRASVADVIVN 438


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