BLASTX nr result
ID: Anemarrhena21_contig00041824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00041824
(459 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 61 7e-17
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 72 1e-16
ref|XP_010670869.1| PREDICTED: uncharacterized protein LOC104887... 59 2e-15
gb|KEH41789.1| endonuclease/exonuclease/phosphatase family prote... 54 3e-15
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 54 4e-15
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A... 72 1e-14
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936... 54 4e-14
gb|EEC78920.1| hypothetical protein OsI_19335 [Oryza sativa Indi... 66 6e-14
ref|XP_009124788.1| PREDICTED: putative ribonuclease H protein A... 56 1e-13
ref|XP_009121302.1| PREDICTED: putative ribonuclease H protein A... 61 2e-13
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 64 3e-13
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group] 64 3e-13
ref|XP_009149305.1| PREDICTED: putative ribonuclease H protein A... 62 3e-13
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 62 4e-13
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 52 4e-13
ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein A... 52 4e-13
ref|XP_011459751.1| PREDICTED: uncharacterized protein LOC105350... 51 5e-13
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 53 8e-13
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 53 8e-13
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 53 8e-13
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 60.8 bits (146), Expect(2) = 7e-17
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +2
Query: 134 KSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*I 313
+ G + +HLV+W+ I K GGLG+RSMRQ N F K+ W+++ P S+ +
Sbjct: 836 QEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRILRAKY 895
Query: 314 WED-IKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWY 454
++ + KS + + + +++ G+ + +GNG ++ W+
Sbjct: 896 CDNRCDIDMFKEKSNASSTWRGILSSIDVVRKGINSAVGNGAKTLFWH 943
Score = 52.8 bits (125), Expect(2) = 7e-17
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
AGR TL QS+ SIP YT Q+ ++P + CD+IDR R F W + +R
Sbjct: 793 AGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKR 840
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 71.6 bits (174), Expect(2) = 1e-16
Identities = 37/104 (35%), Positives = 51/104 (49%)
Frame = +2
Query: 143 SQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IWED 322
S L +SWD IC P GGLG R + N F AK+ W +I + + + WE
Sbjct: 836 SHYLARMSWDRICSPTGKGGLGFRRLHNWNLAFMAKLGWMIIKDETKLWVRILKARYWER 895
Query: 323 IKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWY 454
K+ P +D+ KG L++ GL IGNG+ +SLWY
Sbjct: 896 GSFLSAVGKNHHSPIWRDIVKGRELLEKGLVRRIGNGRSTSLWY 939
Score = 40.8 bits (94), Expect(2) = 1e-16
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTW 128
AGR TL +S + S PVY Q+ +P++V +EI++ R F W
Sbjct: 790 AGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCRKFLW 830
>ref|XP_010670869.1| PREDICTED: uncharacterized protein LOC104887816 [Beta vulgaris
subsp. vulgaris]
Length = 1295
Score = 59.3 bits (142), Expect(2) = 2e-15
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
AGR+TLA+S++ S+ Y+ QT ++P VCD+IDR R F W GN+D +
Sbjct: 736 AGRITLAKSTVSSLAYYSMQTAKIPKTVCDDIDRKTRRFVWGGNEDTK 783
Score = 49.3 bits (116), Expect(2) = 2e-15
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Frame = +2
Query: 152 LHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IWEDIKL 331
+HL++WD + PK GGLGL S N F AK+ W+++ P +W +
Sbjct: 785 VHLIAWDALQRPKDQGGLGLHSASHANKAFMAKLGWRLLTEPNA---------LWSRV-- 833
Query: 332 SPLSTKSFRFPCLKD--------------VCKGLALIKDGLTNLIGNGKQSSLW 451
L TK + C D + + ++ +G+ + IGNG ++ W
Sbjct: 834 --LRTKYCKGRCDSDMFQPKTGASNVWNRIAENSNILCEGIRSAIGNGIKTLFW 885
>gb|KEH41789.1| endonuclease/exonuclease/phosphatase family protein [Medicago
truncatula]
Length = 1456
Score = 53.9 bits (128), Expect(2) = 3e-15
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTW-KGNQDRRAY 155
AGR+TLA+S I +IP Y Q ++P +CDE D++ RGF W +Q R+A+
Sbjct: 1076 AGRITLAKSVISTIPYYHMQYAKIPKTICDEFDKIQRGFIWGDSDQGRKAH 1126
Score = 53.9 bits (128), Expect(2) = 3e-15
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 155 HLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IWEDIKL- 331
HL+SWD CLPK+ GGLG R +MN+ F K+ W +I P+ + + + L
Sbjct: 1126 HLISWDVCCLPKADGGLGFRQTHKMNEAFLMKILWNLIKNPEDLWCRVLRSKYGRNNDLI 1185
Query: 332 SPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
+ ++ + P K + K + IG+G+ ++ W D
Sbjct: 1186 ASINAHPYDSPLWKALVNIWNDFKGHVVWNIGDGRNTNFWLD 1227
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 53.9 bits (128), Expect(2) = 4e-15
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTW-KGNQDRRAY 155
AGR+TL++ I SIP Y Q ++P +CDEI+++ RGF W NQ R+A+
Sbjct: 217 AGRITLSKFVISSIPYYHMQYAKIPKTICDEIEKIQRGFVWGDSNQGRKAH 267
Score = 53.5 bits (127), Expect(2) = 4e-15
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +2
Query: 155 HLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IWEDIKL- 331
HLVSWD CLPK GGLG + MN+ F KM W +I P + + + L
Sbjct: 267 HLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLN 326
Query: 332 SPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
+ +S++ + P K + K + IG+G+ ++ W D
Sbjct: 327 NNISSQPYDSPLWKAIVGIWDDFKRHVIWQIGDGRSTNFWLD 368
>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 896
Score = 72.4 bits (176), Expect(2) = 1e-14
Identities = 35/109 (32%), Positives = 56/109 (51%)
Frame = +2
Query: 131 RKSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG* 310
+ GS+G+H +W + LPK GG+G R + ND AK W+++ P +++ +G
Sbjct: 358 KSDGSKGMHWFAWQRMSLPKKEGGMGFRDFEKFNDALLAKQVWRILIKPNSLMARVLKGK 417
Query: 311 IWEDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
+ + + TK + G AL+K GL +IGNG+ SLW D
Sbjct: 418 YFPNSNILKAGTKKQSSYIWNSLLHGQALLKRGLRFIIGNGESVSLWAD 466
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 9 GRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTW 128
G+ L +S + PVY +MP VCD+I+ + F W
Sbjct: 317 GKEVLTKSIASATPVYPMNVFKMPKKVCDDINNTLAQFWW 356
>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
bretschneideri]
Length = 1365
Score = 53.9 bits (128), Expect(2) = 4e-14
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 122 HMERKSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDS 301
H E KS +HLV W+T+ PKSMGGLGL+ MN AK W+++ +Q
Sbjct: 828 HTEDKSK---VHLVKWETVSTPKSMGGLGLKDTHAMNQALLAKTGWKLMQRDPGLWAQVL 884
Query: 302 QG*IWEDIKLSPLSTKSFR--FPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
+G + + + F + + G +I +G+ +G+G Q W D
Sbjct: 885 KGKYLKHHDMVGACSAKFTNCSHTWRGILFGAQIIPNGMRWRVGSGSQIHFWKD 938
Score = 50.4 bits (119), Expect(2) = 4e-14
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDR 146
AGR+ QS +IP+Y+ Q+ R+P+++CD+ID++ R F W +D+
Sbjct: 786 AGRLVYLQSVASAIPIYSMQSTRLPISICDKIDKLNRNFLWGHTEDK 832
>gb|EEC78920.1| hypothetical protein OsI_19335 [Oryza sativa Indica Group]
gi|222630991|gb|EEE63123.1| hypothetical protein
OsJ_17931 [Oryza sativa Japonica Group]
Length = 616
Score = 65.9 bits (159), Expect(2) = 6e-14
Identities = 33/101 (32%), Positives = 51/101 (50%)
Frame = +2
Query: 155 HLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IWEDIKLS 334
H SWD + PK+ GGLG R + N ++ AW++I P ++ + + + L
Sbjct: 357 HWKSWDCLTKPKNQGGLGFRDFKLFNQALLSRQAWRLIDNPDSLCARVLKAKYYPNGSLV 416
Query: 335 PLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
S PC K + GLAL+K+G+ +GNGK +W D
Sbjct: 417 DTSFSGCASPCWKAIEFGLALLKEGIIWRVGNGKSIRIWRD 457
Score = 37.7 bits (86), Expect(2) = 6e-14
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 9 GRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRRAYT 158
G+ L +S + +IPVY ++P +VC+++ R+ R F W G ++R+ T
Sbjct: 308 GKEILIKSVLQAIPVYVMGLFKLPDSVCEDLTRISRNFWW-GAENRKRKT 356
>ref|XP_009124788.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 339
Score = 56.2 bits (134), Expect(2) = 1e-13
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 149 GLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIH 271
G HLVSWD IC PK+ GGLG+R R MN AK+ W+++H
Sbjct: 183 GQHLVSWDKICKPKASGGLGIRVSRDMNKALLAKVGWRLLH 223
Score = 46.6 bits (109), Expect(2) = 1e-13
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQ 140
AGRVTL +S + SIPV+T T MP+ + +++D + R F W Q
Sbjct: 140 AGRVTLTKSVLSSIPVHTMSTISMPVGILEKLDSLARSFVWGSGQ 184
>ref|XP_009121302.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 530
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +2
Query: 149 GLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQ---------DS 301
G HLVSWD IC PK+ GGLG+R R+MN AK+ W+++H K ++ D
Sbjct: 274 GQHLVSWDKICKPKADGGLGIRVSREMNKALIAKVGWRLLHDDKSLWARVLRGKYVVGDI 333
Query: 302 QG*IWEDIKLSPLSTKSFRFPCLKDVCKGL-ALIKDGLTNLIGNGKQSSLWYD 457
Q W + + ST + V G+ ++ G +IGNG++ W D
Sbjct: 334 QDPTWRVVGKTASST-------WRSVVLGIREVVVKGHVWVIGNGRRIKFWTD 379
Score = 40.4 bits (93), Expect(2) = 2e-13
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQ 140
AGRVTL ++ + SIPV+ T +P + D++D + R F W Q
Sbjct: 231 AGRVTLTKAVLSSIPVHQMSTICLPASTLDKLDSLSRSFVWGSGQ 275
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 64.3 bits (155), Expect(2) = 3e-13
Identities = 30/106 (28%), Positives = 56/106 (52%)
Frame = +2
Query: 134 KSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*I 313
+ G + +H ++W+ + PK +GGLG R +R N A+ AW++I P ++ +
Sbjct: 1082 EKGEKKVHWIAWEKLTSPKLLGGLGFRDIRCFNQALLARQAWRLIESPDSLCARVLKAKY 1141
Query: 314 WEDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLW 451
+ + ++ + S P K + GL L+K GL IG+G ++ +W
Sbjct: 1142 YPNGTITDTAFPSVSSPTWKGIVHGLELLKKGLIWRIGDGSKTKIW 1187
Score = 37.0 bits (84), Expect(2) = 3e-13
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTW 128
AG+ L +S ++P YT +MP C+E +++VR F W
Sbjct: 1039 AGKEALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWW 1079
>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
Length = 1205
Score = 64.3 bits (155), Expect(2) = 3e-13
Identities = 30/106 (28%), Positives = 56/106 (52%)
Frame = +2
Query: 134 KSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*I 313
+ G + +H ++W+ + PK +GGLG R +R N A+ AW++I P ++ +
Sbjct: 818 EKGEKKVHWIAWEKLTSPKLLGGLGFRDIRCFNQALLARQAWRLIESPDSLCARVLKAKY 877
Query: 314 WEDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLW 451
+ + ++ + S P K + GL L+K GL IG+G ++ +W
Sbjct: 878 YPNGTITDTAFPSVSSPTWKGIVHGLELLKKGLIWRIGDGSKTKIW 923
Score = 37.0 bits (84), Expect(2) = 3e-13
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTW 128
AG+ L +S ++P YT +MP C+E +++VR F W
Sbjct: 775 AGKEALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWW 815
>ref|XP_009149305.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 963
Score = 62.0 bits (149), Expect(2) = 3e-13
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +2
Query: 131 RKSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG* 310
R G + +SW +CLPK+ GG+G + N AK AW++ P LS+ +G
Sbjct: 431 RNDGKRKFSWISWQRLCLPKNEGGMGFCDLHGFNVALLAKQAWKIEQNPTSLLSRIYKGR 490
Query: 311 IWED---IKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
+ ++ + L++ S+ + K + G L+K GL IGNG+ +++W D
Sbjct: 491 YYNSSTFLQSTSLTSSSYGW---KSIQVGKDLLKKGLVMQIGNGQNTNVWND 539
Score = 39.3 bits (90), Expect(2) = 3e-13
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRRAYT 158
AG+ L +S + + PVY +P +VCD+I+ + GF W N +R ++
Sbjct: 389 AGKEVLIKSVLQAKPVYPMSCFLLPKSVCDDINSQLSGFWWGRNDGKRKFS 439
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 62.4 bits (150), Expect(2) = 4e-13
Identities = 35/108 (32%), Positives = 53/108 (49%)
Frame = +2
Query: 134 KSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*I 313
+ G + H SW+ + PKS GGLG R R N A+ AW++I P ++ +
Sbjct: 1533 EKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKY 1592
Query: 314 WEDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
+ + L S P K + GL+L+K+G+ IGNGK +W D
Sbjct: 1593 FPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRD 1640
Score = 38.5 bits (88), Expect(2) = 4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 9 GRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
G+ L +S I +IPVY ++P +VC+E+ ++ R F W + +R
Sbjct: 1491 GKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNFWWGVEKGKR 1537
Score = 57.0 bits (136), Expect(2) = 1e-11
Identities = 33/101 (32%), Positives = 50/101 (49%)
Frame = +2
Query: 134 KSGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*I 313
+ G + H SW+ + PKS GGLG R R N A+ AW++I P ++ +
Sbjct: 835 EKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKY 894
Query: 314 WEDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGK 436
+ + L S P K + GL+L+K+G+ IGNGK
Sbjct: 895 FPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGK 935
Score = 38.5 bits (88), Expect(2) = 1e-11
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 9 GRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
G+ L +S I +IPVY ++P +VC+E+ ++ R F W + +R
Sbjct: 793 GKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNFWWGVEKGKR 839
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 52.0 bits (123), Expect(2) = 4e-13
Identities = 31/106 (29%), Positives = 48/106 (45%)
Frame = +2
Query: 137 SGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IW 316
S ++G+HLV+W TI PKS+GGLG+RS R N K+ W ++ +
Sbjct: 832 SNNKGIHLVNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQSTNKLWVNLLAKKYS 891
Query: 317 EDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWY 454
L + S P + + ++K G + G G SS W+
Sbjct: 892 SGTSLLEANVNSNSSPSWFSIIRAKDILKTGYSWRAGAG-TSSFWF 936
Score = 48.9 bits (115), Expect(2) = 4e-13
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 9 GRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDR 146
GR+TLA S + +IP Y Q +P +CD ID+ R F WKG+ ++
Sbjct: 790 GRLTLATSVLSTIPTYYMQINWLPQNICDSIDQTARNFLWKGSNNK 835
>ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 360
Score = 52.0 bits (123), Expect(2) = 4e-13
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
AGR+TL QS I +IP+Y QT ++P + ++ID+ R F W G D++
Sbjct: 35 AGRITLTQSVIQAIPIYAMQTTKIPFGIREKIDQACRRFIWSGAADKK 82
Score = 48.9 bits (115), Expect(2) = 4e-13
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 10/112 (8%)
Frame = +2
Query: 152 LHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IWEDIKL 331
+ LV WDTIC K GGLGL+ + MND K+ W +I P +W + L
Sbjct: 84 ISLVKWDTICQLKPSGGLGLKQLNLMNDALLMKIGWVLIASPNS---------LWVKVLL 134
Query: 332 SPLSTKSFRFPCLKDVCKGLALIK----------DGLTNLIGNGKQSSLWYD 457
S P G + K G+ IGNG + W+D
Sbjct: 135 SKYGLAPNALPSTLPTKCGSYMWKAVGGIWHEVLKGIKWDIGNGNRVRFWWD 186
>ref|XP_011459751.1| PREDICTED: uncharacterized protein LOC105350077 [Fragaria vesca
subsp. vesca]
Length = 704
Score = 50.8 bits (120), Expect(2) = 5e-13
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 3 FAGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
FAGR+TL QS +IP+Y QT + P ++CD++D++ R F W ++++
Sbjct: 369 FAGRLTLVQSVTSAIPMYAMQTTKFPFSLCDKLDKLNRDFIWGDVENKK 417
Score = 49.7 bits (117), Expect(2) = 5e-13
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 152 LHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQV 265
+HLV+WDTIC PK +GGLG++ MN +K+ W V
Sbjct: 419 VHLVNWDTICQPKYLGGLGIKKTADMNQAMLSKIGWDV 456
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 52.8 bits (125), Expect(2) = 8e-13
Identities = 30/107 (28%), Positives = 53/107 (49%)
Frame = +2
Query: 137 SGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IW 316
+ ++ LH V+W IC P++ GGLGLR R N F KMAWQ+ + + +
Sbjct: 1367 TNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYV 1426
Query: 317 EDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
++ L ++S + + KG ++ + +GNG++ + W D
Sbjct: 1427 KNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWND 1473
Score = 47.0 bits (110), Expect(2) = 8e-13
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
AGR L Q+S+ ++P YT Q +P++ C+EID+ R F W + + R
Sbjct: 1323 AGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTR 1370
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 52.8 bits (125), Expect(2) = 8e-13
Identities = 30/107 (28%), Positives = 53/107 (49%)
Frame = +2
Query: 137 SGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IW 316
+ ++ LH V+W IC P++ GGLGLR R N F KMAWQ+ + + +
Sbjct: 835 TNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYV 894
Query: 317 EDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
++ L ++S + + KG ++ + +GNG++ + W D
Sbjct: 895 KNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWND 941
Score = 47.0 bits (110), Expect(2) = 8e-13
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
AGR L Q+S+ ++P YT Q +P++ C+EID+ R F W + + R
Sbjct: 791 AGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTR 838
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 52.8 bits (125), Expect(2) = 8e-13
Identities = 30/107 (28%), Positives = 53/107 (49%)
Frame = +2
Query: 137 SGSQGLHLVSWDTICLPKSMGGLGLRSMRQMNDIFRAKMAWQVIHCPKQTLSQDSQG*IW 316
+ ++ LH V+W IC P++ GGLGLR R N F KMAWQ+ + + +
Sbjct: 835 TNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYV 894
Query: 317 EDIKLSPLSTKSFRFPCLKDVCKGLALIKDGLTNLIGNGKQSSLWYD 457
++ L ++S + + KG ++ + +GNG++ + W D
Sbjct: 895 KNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWND 941
Score = 47.0 bits (110), Expect(2) = 8e-13
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 6 AGRVTLAQSSIMSIPVYTQQTGRMPLAVCDEIDRVVRGFTWKGNQDRR 149
AGR L Q+S+ ++P YT Q +P++ C+EID+ R F W + + R
Sbjct: 791 AGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTR 838