BLASTX nr result
ID: Anemarrhena21_contig00041566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00041566
(217 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 112 1e-22
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 112 1e-22
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 112 1e-22
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 112 1e-22
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 112 1e-22
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 112 1e-22
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 112 1e-22
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 111 2e-22
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 111 2e-22
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 111 2e-22
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 110 3e-22
pir||T03662 reverse transcriptase homolog - rice copia-like retr... 110 4e-22
gb|AAG44331.1|AF232991_1 reverse transcriptase-like protein [Ama... 109 8e-22
gb|AAL36465.1| reverse transcriptase [Setaria italica] 109 8e-22
gb|AAG44340.1|AF233002_1 reverse transcriptase-like protein [Ama... 109 8e-22
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 108 1e-21
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 108 1e-21
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 108 1e-21
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 108 1e-21
gb|AAK55317.1|AF349736_1 putative reverse transcriptase, partial... 108 1e-21
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 112 bits (280), Expect = 1e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 863 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 922
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 923 QKFRRSNYDSCVY 935
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 112 bits (280), Expect = 1e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 900 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 959
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 960 QKFRRSNYDSCVY 972
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 112 bits (280), Expect = 1e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 685 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 744
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 745 QKFRRSNYDSCVY 757
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 112 bits (280), Expect = 1e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 853 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 912
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 913 QKFRRSNYDSCVY 925
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 112 bits (280), Expect = 1e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 836 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 895
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 896 QKFRRSNYDSCVY 908
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 112 bits (280), Expect = 1e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 313 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 372
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 373 QKFRRSNYDSCVY 385
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 112 bits (279), Expect = 1e-22
Identities = 49/73 (67%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW*R-FDSFMIK 41
MDVKTAFLHG+LEE+IYM QPEG+++ G+E+ VC L+KSLYGLKQSP+QW + FD++M+K
Sbjct: 893 MDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYMLK 952
Query: 40 AKYNRCKYDSCVY 2
Y RC+YD CVY
Sbjct: 953 IGYTRCQYDCCVY 965
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 111 bits (278), Expect = 2e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 962 MDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 1021
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 1022 QKFRRSNYDSCVY 1034
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 111 bits (278), Expect = 2e-22
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 962 MDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 1021
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 1022 QKFRRSNYDSCVY 1034
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 111 bits (277), Expect = 2e-22
Identities = 51/73 (69%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 669 MDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 728
Query: 40 AKYNRCKYDSCVY 2
K+ R YD+CVY
Sbjct: 729 QKFRRSNYDNCVY 741
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 110 bits (276), Expect = 3e-22
Identities = 51/73 (69%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QP+G++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 1134 MDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLS 1193
Query: 40 AKYNRCKYDSCVY 2
K+ R YDSCVY
Sbjct: 1194 QKFRRSNYDSCVY 1206
>pir||T03662 reverse transcriptase homolog - rice copia-like retrotransposon
Rtr21 (fragment) [Oryza sativa]
gi|1419127|emb|CAA99752.1| reverse transcriptase,
partial [Oryza sativa Japonica Group]
Length = 92
Score = 110 bits (275), Expect = 4e-22
Identities = 51/73 (69%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEE+IYM+QPEG++ G+E+ VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 2 MDVKTAFLHGELEEDIYMEQPEGFVIPGKENLVCRLKKSLYGLKQSPRQWHKRFDSFMLS 61
Query: 40 AKYNRCKYDSCVY 2
++ R YDSCVY
Sbjct: 62 QEFRRSNYDSCVY 74
>gb|AAG44331.1|AF232991_1 reverse transcriptase-like protein [Amaranthus quitensis]
Length = 94
Score = 109 bits (272), Expect = 8e-22
Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = -1
Query: 214 DVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIKA 38
DVKTAFLHG+LEEEIYM QPEG+ EG+ES VC LRKSLYGLKQSP+QW RFDSFM+K
Sbjct: 2 DVKTAFLHGDLEEEIYMYQPEGFKVEGKESLVCRLRKSLYGLKQSPRQWYKRFDSFMLKQ 61
Query: 37 KYNRCKYDSCVY 2
++R YD CVY
Sbjct: 62 GFSRSSYDCCVY 73
>gb|AAL36465.1| reverse transcriptase [Setaria italica]
Length = 92
Score = 109 bits (272), Expect = 8e-22
Identities = 53/73 (72%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
MDVKTAFLHGELEEEIYM QPEG+I G+E VC L+KSLYGLKQSP+QW RFDSFM+
Sbjct: 2 MDVKTAFLHGELEEEIYMDQPEGFIVPGKEDHVCKLKKSLYGLKQSPRQWYKRFDSFMLS 61
Query: 40 AKYNRCKYDSCVY 2
+ R YDSCVY
Sbjct: 62 NCFKRSDYDSCVY 74
>gb|AAG44340.1|AF233002_1 reverse transcriptase-like protein [Amaranthus quitensis]
Length = 95
Score = 109 bits (272), Expect = 8e-22
Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = -1
Query: 214 DVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIKA 38
DVKTAFLHG+LEEEIYM QPEG+ EG+ES VC LRKSLYGLKQSP+QW RFDSFM+K
Sbjct: 3 DVKTAFLHGDLEEEIYMYQPEGFKVEGKESLVCRLRKSLYGLKQSPRQWYKRFDSFMLKQ 62
Query: 37 KYNRCKYDSCVY 2
++R YD CVY
Sbjct: 63 GFSRSSYDCCVY 74
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 108 bits (271), Expect = 1e-21
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
+DVKTAFLHGELEE+IYM QPEG+I G+E VC L++SLYGLKQSP+QW RFDSFM+
Sbjct: 928 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 987
Query: 40 AKYNRCKYDSCVY 2
+ R KYDSCVY
Sbjct: 988 HSFKRSKYDSCVY 1000
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 108 bits (271), Expect = 1e-21
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
+DVKTAFLHGELEE+IYM QPEG+I G+E VC L++SLYGLKQSP+QW RFDSFM+
Sbjct: 928 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 987
Query: 40 AKYNRCKYDSCVY 2
+ R KYDSCVY
Sbjct: 988 HSFKRSKYDSCVY 1000
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 108 bits (271), Expect = 1e-21
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
+DVKTAFLHGELEE+IYM QPEG+I G+E VC L++SLYGLKQSP+QW RFDSFM+
Sbjct: 928 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 987
Query: 40 AKYNRCKYDSCVY 2
+ R KYDSCVY
Sbjct: 988 HSFKRSKYDSCVY 1000
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 108 bits (271), Expect = 1e-21
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 MDVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIK 41
+DVKTAFLHGELEE+IYM QPEG+I G+E VC L++SLYGLKQSP+QW RFDSFM+
Sbjct: 930 LDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLS 989
Query: 40 AKYNRCKYDSCVY 2
+ R KYDSCVY
Sbjct: 990 HSFKRSKYDSCVY 1002
>gb|AAK55317.1|AF349736_1 putative reverse transcriptase, partial [Oryza sativa]
Length = 94
Score = 108 bits (270), Expect = 1e-21
Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = -1
Query: 214 DVKTAFLHGELEEEIYMKQPEGYIQEGQESKVCLLRKSLYGLKQSPKQW-*RFDSFMIKA 38
DVKTAFLHGELEE+IYM QPEG+I G+E+ VC L++SLYGLKQSP+QW RFDSFM+
Sbjct: 3 DVKTAFLHGELEEDIYMDQPEGFIVPGKENYVCKLKRSLYGLKQSPRQWNKRFDSFMLSH 62
Query: 37 KYNRCKYDSCVY 2
+ R KYDSCVY
Sbjct: 63 SFKRSKYDSCVY 74