BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00041103
         (399 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III s...    69   9e-10
ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III s...    67   6e-09
ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III s...    64   4e-08
ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III s...    64   4e-08
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...    63   9e-08
ref|XP_010099361.1| DNA-directed RNA polymerase III subunit RPC5...    62   2e-07
ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III s...    62   2e-07
gb|EMS55910.1| hypothetical protein TRIUR3_27365 [Triticum urartu]     61   3e-07
ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III s...    60   4e-07
ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III s...    60   4e-07
ref|XP_008241882.1| PREDICTED: DNA-directed RNA polymerase III s...    60   4e-07
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun...    60   6e-07
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...    59   1e-06
gb|KHN35144.1| DNA-directed RNA polymerase III subunit RPC5 [Gly...    59   2e-06
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...    59   2e-06
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017...    58   2e-06
ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...    58   3e-06
emb|CDY33894.1| BnaA02g30930D [Brassica napus]                         58   3e-06
ref|XP_007157071.1| hypothetical protein PHAVU_002G0404000g, par...    58   3e-06
ref|XP_010442420.1| PREDICTED: DNA-directed RNA polymerase III s...    57   4e-06

>ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
           [Elaeis guineensis]
          Length = 695

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 34/110 (30%)
 Frame = -2

Query: 230 AAPTRFPPKLKGKVKAEPSSN-------------------------QERGKSTV----GT 138
           A P+RF PK+KG++KA+P+++                         QE   S V    G 
Sbjct: 40  ARPSRFQPKIKGRIKADPATDSGPLPPPSRPPTAPIKKQDDDVGMSQESASSPVSFPNGA 99

Query: 137 AVAVPIPMEEDD---PVVREIDVFCTH--LKENAQLYVMQYPLRPSWRPY 3
             A   PME DD    VVREIDVF T   + E+  LYVMQYPLRPSWRPY
Sbjct: 100 EEAESEPMEVDDGEDTVVREIDVFFTPAPVDEDTCLYVMQYPLRPSWRPY 149


>ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa
           acuminata subsp. malaccensis]
          Length = 672

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 56/144 (38%), Positives = 69/144 (47%), Gaps = 49/144 (34%)
 Frame = -2

Query: 287 MADGD-PF-----DLNCSMD--------QMPPRAAPTRFPPKLKGKVKAEPSSNQERGK- 153
           M DGD PF     DL+ ++D        Q P R  P RF P++KGK+KAEPS++ E  + 
Sbjct: 1   MDDGDDPFASGAADLDMALDLDHSRGLGQRPQR--PARFQPRVKGKIKAEPSADPEPPRQ 58

Query: 152 -------------------STVGTAVAVPIPM-------------EEDDPVVREIDVFCT 69
                              S+V +A  V                 EE+D VVREI VF T
Sbjct: 59  PPPAPDPVKKHEAEGDPSASSVSSAPDVDAVATEAMDVDEEEKEEEEEDSVVREIGVFFT 118

Query: 68  H--LKENAQLYVMQYPLRPSWRPY 3
              L E+  LYVMQY LRPSWRPY
Sbjct: 119 PAPLDEDTYLYVMQYVLRPSWRPY 142


>ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Elaeis guineensis]
          Length = 701

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 41/117 (35%)
 Frame = -2

Query: 230 AAPTRFPPKLKGKVKAEPSSN-------------------------QERGKSTV----GT 138
           A P+RF PK+KG++KA+P+++                         QE   S V    G 
Sbjct: 40  ARPSRFQPKIKGRIKADPATDSGPLPPPSRPPTAPIKKQDDDVGMSQESASSPVSFPNGA 99

Query: 137 AVAVPIPMEEDD---PVVREIDVFCTHLKENAQ---------LYVMQYPLRPSWRPY 3
             A   PME DD    VVREIDVF T    +           LYVMQYPLRPSWRPY
Sbjct: 100 EEAESEPMEVDDGEDTVVREIDVFFTPAPVDEDTCVRVFLLNLYVMQYPLRPSWRPY 156


>ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Elaeis guineensis]
          Length = 702

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 41/117 (35%)
 Frame = -2

Query: 230 AAPTRFPPKLKGKVKAEPSSN-------------------------QERGKSTV----GT 138
           A P+RF PK+KG++KA+P+++                         QE   S V    G 
Sbjct: 40  ARPSRFQPKIKGRIKADPATDSGPLPPPSRPPTAPIKKQDDDVGMSQESASSPVSFPNGA 99

Query: 137 AVAVPIPMEEDD---PVVREIDVFCTHLKENAQ---------LYVMQYPLRPSWRPY 3
             A   PME DD    VVREIDVF T    +           LYVMQYPLRPSWRPY
Sbjct: 100 EEAESEPMEVDDGEDTVVREIDVFFTPAPVDEDTCVRVFLLNLYVMQYPLRPSWRPY 156


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
           gi|550334731|gb|EEE90658.2| hypothetical protein
           POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -2

Query: 197 GKVKAEPSSNQERGKSTV-GTAVAVPIPMEEDDPVVREIDVFCT-HLKENAQLYVMQYPL 24
           G VK E  + +ERG +      + V    +EDD VVREIDV+ T  +  N QLYVMQYPL
Sbjct: 77  GNVKMEIDAKEERGAAVKENDLMDVDKEEDEDDVVVREIDVYYTPSVDPNTQLYVMQYPL 136

Query: 23  RPSWRPY 3
           RP WRPY
Sbjct: 137 RPCWRPY 143


>ref|XP_010099361.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
           gi|587889203|gb|EXB77882.1| DNA-directed RNA polymerase
           III subunit RPC5 [Morus notabilis]
          Length = 732

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 37/91 (40%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
 Frame = -2

Query: 245 QMPPRAAPTRFPPKLKGKVKAEPSSNQERGKSTVGTAVAVPIPMEEDDP---------VV 93
           Q  P+  P  F  K + ++ A+P       K  V +A       EE+D          VV
Sbjct: 52  QTAPKPEPQEFEAKKEKEIDAKPKPENGFVKMEVDSAAGAKEEPEENDSMEVEAEEDMVV 111

Query: 92  REIDVFCT-HLKENAQLYVMQYPLRPSWRPY 3
           REIDVF    + E  QLYV+QYPLRPSWRPY
Sbjct: 112 REIDVFFNPKIDEGTQLYVLQYPLRPSWRPY 142


>ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus
           euphratica]
          Length = 666

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/74 (51%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
 Frame = -2

Query: 197 GKVKAEPSSNQERGKSTVGTAVAVPIPME--------EDDPVVREIDVFCT-HLKENAQL 45
           G VK E  + +ERG      AV    PM+        EDD VVREIDV+ T  +  N QL
Sbjct: 77  GNVKMEIDAKEERG-----AAVKENDPMDVDKEEDEDEDDVVVREIDVYYTPSVDPNTQL 131

Query: 44  YVMQYPLRPSWRPY 3
           YVMQYPLRP WRPY
Sbjct: 132 YVMQYPLRPCWRPY 145


>gb|EMS55910.1| hypothetical protein TRIUR3_27365 [Triticum urartu]
          Length = 149

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 13/107 (12%)
 Frame = -2

Query: 284 ADGDPFDLNCSMDQMPPRAAPTRFPPKLKGKVKAE--PSSNQERGKSTVGTAVAVPIP-- 117
           AD D  DL  S+D   P ++  RF PK++GK KA+  P +  +R     G   A+     
Sbjct: 5   ADLDMADL-ASLDA--PASSAARFHPKVRGKAKAKLKPKTKPKRKSGPEGGVDAMETDRV 61

Query: 116 -------MEEDDPVVREIDVFCTH--LKENAQLYVMQYPLRPSWRPY 3
                  +E++D VVRE+DV+ T     ++ +LY+ QYPLRP WRPY
Sbjct: 62  SAGESADLEDEDFVVREMDVYFTPKPFDKDTKLYIAQYPLRPCWRPY 108


>ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Phoenix dactylifera]
          Length = 701

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 45/117 (38%), Positives = 55/117 (47%), Gaps = 41/117 (35%)
 Frame = -2

Query: 230 AAPTRFPPKLKGKVKAEPSSN--------------------------------QERGKST 147
           A P RF PK+KGK++A+ +++                                QE   S+
Sbjct: 39  ARPARFQPKIKGKMRADSATDPGPLPAPPRPPLAPIKKQDEDDVAMFKADEASQEPASSS 98

Query: 146 V----GTAVAVPIPMEEDD---PVVREIDVFCTH--LKENAQLYVMQYPLRPSWRPY 3
                G   A   P+E DD    VVREIDVF T   L E+  LYVMQYPLRPSWRPY
Sbjct: 99  FSFPNGAEEAESEPVEVDDGEDTVVREIDVFFTPAPLDEDTCLYVMQYPLRPSWRPY 155


>ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Phoenix dactylifera] gi|672197655|ref|XP_008777119.1|
           PREDICTED: DNA-directed RNA polymerase III subunit RPC5
           isoform X1 [Phoenix dactylifera]
          Length = 702

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 45/117 (38%), Positives = 55/117 (47%), Gaps = 41/117 (35%)
 Frame = -2

Query: 230 AAPTRFPPKLKGKVKAEPSSN--------------------------------QERGKST 147
           A P RF PK+KGK++A+ +++                                QE   S+
Sbjct: 39  ARPARFQPKIKGKMRADSATDPGPLPAPPRPPLAPIKKQDEDDVAMFKADEASQEPASSS 98

Query: 146 V----GTAVAVPIPMEEDD---PVVREIDVFCTH--LKENAQLYVMQYPLRPSWRPY 3
                G   A   P+E DD    VVREIDVF T   L E+  LYVMQYPLRPSWRPY
Sbjct: 99  FSFPNGAEEAESEPVEVDDGEDTVVREIDVFFTPAPLDEDTCLYVMQYPLRPSWRPY 155


>ref|XP_008241882.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Prunus
           mume]
          Length = 696

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
 Frame = -2

Query: 119 PMEEDD---PVVREIDVFCT-HLKENAQLYVMQYPLRPSWRPY 3
           PMEEDD    VVREIDVF   H+ +N+QLYV+QYPLRP WRPY
Sbjct: 100 PMEEDDVEDTVVREIDVFFNPHIDDNSQLYVLQYPLRPWWRPY 142


>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
           gi|462397466|gb|EMJ03134.1| hypothetical protein
           PRUPE_ppa002228mg [Prunus persica]
          Length = 698

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/43 (67%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
 Frame = -2

Query: 119 PMEEDD---PVVREIDVFCT-HLKENAQLYVMQYPLRPSWRPY 3
           PMEEDD    +VREIDVF   H+ +N+QLYV+QYPLRP WRPY
Sbjct: 100 PMEEDDVEDTIVREIDVFFNPHIDDNSQLYVLQYPLRPWWRPY 142


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
           gi|358344405|ref|XP_003636280.1| DNA-directed RNA
           polymerase III subunit RPC5 [Medicago truncatula]
           gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
           III subunit RPC5-like protein [Medicago truncatula]
          Length = 683

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = -2

Query: 239 PPRAAPTRFPPKLKGKVKAEPSSNQERGKSTVGTAVAVPIPMEEDDPVVREIDV-FCTHL 63
           P  +  T    K++GKV +  + + E  ++  G+    P  M+E+D VVREIDV F   +
Sbjct: 64  PNASVKTDAESKIEGKVDSR-NVDVEMTEAVDGSREVNP--MDEEDTVVREIDVYFSPSI 120

Query: 62  KENAQLYVMQYPLRPSWRPY 3
             + +LYVMQYPLRPSWRPY
Sbjct: 121 DNDTKLYVMQYPLRPSWRPY 140


>gb|KHN35144.1| DNA-directed RNA polymerase III subunit RPC5 [Glycine soja]
          Length = 697

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = -2

Query: 224 PTRFPPKLKGKVKAEPSSNQERGKSTVGTAVAVPIPMEEDDPVVREIDVFCT-HLKENAQ 48
           PT   P+L   VK E + ++   +S     +   IP  E+D VVREIDVF +  +    Q
Sbjct: 72  PTHTKPELDATVKMEEAEDEP--ESVRDDPIDEDIP--EEDTVVREIDVFFSPSVDAQTQ 127

Query: 47  LYVMQYPLRPSWRPY 3
           LYV QYPLRPSWRPY
Sbjct: 128 LYVFQYPLRPSWRPY 142


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Glycine max]
          Length = 697

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = -2

Query: 224 PTRFPPKLKGKVKAEPSSNQERGKSTVGTAVAVPIPMEEDDPVVREIDVFCT-HLKENAQ 48
           PT   P+L   VK E + ++   +S     +   IP  E+D VVREIDVF +  +    Q
Sbjct: 72  PTHTKPELDATVKMEEAEDEP--ESVRDDPIDEDIP--EEDTVVREIDVFFSPSVDAQTQ 127

Query: 47  LYVMQYPLRPSWRPY 3
           LYV QYPLRPSWRPY
Sbjct: 128 LYVFQYPLRPSWRPY 142


>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332008443|gb|AED95826.1| SIN-like protein
           [Arabidopsis thaliana]
          Length = 689

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = -2

Query: 113 EEDDPVVREIDVFCT-HLKENAQLYVMQYPLRPSWRPY 3
           EEDD VVREIDVF    +  N QLYV+QYPLRPSWRPY
Sbjct: 113 EEDDVVVREIDVFFKPSIDANTQLYVLQYPLRPSWRPY 150


>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
           indicum]
          Length = 683

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
 Frame = -2

Query: 245 QMPPRAA---------PTRFPPKLKGKVKAE-------------PSSNQERGKSTVGTAV 132
           Q+PP AA         P +  P +K  +K E             P   +E G   + T  
Sbjct: 40  QLPPPAASDTVEGLPVPKKEEPGIKPDIKPEFANDGNDMDVEVKPEVKEEEGDDLMETEA 99

Query: 131 AVPIPMEEDDPVVREIDVFCT-HLKENAQLYVMQYPLRPSWRPY 3
                 E DD +VREIDV+ T  +  N +LYV+QYPLRP WRPY
Sbjct: 100 EA----EPDDAIVREIDVYFTPSIDSNTRLYVLQYPLRPLWRPY 139


>emb|CDY33894.1| BnaA02g30930D [Brassica napus]
          Length = 210

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
 Frame = -2

Query: 218 RFPPKLKGKVKAEP----SSNQERGKSTVGTAVAVPIPMEEDDPVVREIDVFCT-HLKEN 54
           RF P    K K EP    SS  +    +V     +    EE+D VVREIDVF    +  N
Sbjct: 17  RFAPGRARKSKPEPTPVHSSETDAPSESVSKKKTLMEEEEEEDVVVREIDVFYNPSIGAN 76

Query: 53  AQLYVMQYPLRPSWRPY 3
            +LYV+QYPLRPSWR Y
Sbjct: 77  TELYVLQYPLRPSWRAY 93


>ref|XP_007157071.1| hypothetical protein PHAVU_002G0404000g, partial [Phaseolus
           vulgaris] gi|561030486|gb|ESW29065.1| hypothetical
           protein PHAVU_002G0404000g, partial [Phaseolus vulgaris]
          Length = 363

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
 Frame = -2

Query: 227 APTRFPPKLKGKVK--AEPSSNQERGKSTVGTAVAVPIPMEEDDP---VVREIDVFCTH- 66
           +P    PKL   V+   EP S  E G+           PM+ED P   VVREIDVF T  
Sbjct: 72  SPIHTKPKLNTNVQMETEPKSEPEDGEEPRRDD-----PMDEDTPEDTVVREIDVFFTSS 126

Query: 65  LKENAQLYVMQYPLRPSWRPY 3
           +   +QL+V QYPLRP+WRPY
Sbjct: 127 IDAESQLFVFQYPLRPNWRPY 147


>ref|XP_010442420.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Camelina sativa]
          Length = 689

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
 Frame = -2

Query: 251 MDQMPPRAAPTRFPPKLKGKVKAEPSSNQERGKSTVGTAVAVP--IPM----------EE 108
           +D     AA    P    G VK E     ++    + T + V   +P+          EE
Sbjct: 57  VDAKSTGAAKVEPPEVYNGAVKMEIDPKVDKEPEIMETELIVEDQLPLQEEKMEEDDEEE 116

Query: 107 DDPVVREIDVFCT-HLKENAQLYVMQYPLRPSWRPY 3
           +D VVREIDVF    +  N QLYV+QYPLRPSWRPY
Sbjct: 117 EDVVVREIDVFFKPSIDANTQLYVLQYPLRPSWRPY 152