BLASTX nr result

ID: Anemarrhena21_contig00040474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00040474
         (258 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008778287.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,...    63   7e-08
ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
ref|XP_010910564.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]    59   2e-06
ref|XP_011020921.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_012483355.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06

>ref|XP_008778287.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Phoenix dactylifera]
          Length = 668

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = -3

Query: 178 AHQPFDQVPLTNTFAWNSLLRSH-NNNNPFQSLLSLRSMLLAGFLPASRTLPLALTASRL 2
           A+QP DQ+PL +TFAWNSLLR+H  + N +Q++L  R MLL G  P   TLP  L AS L
Sbjct: 52  AYQPLDQIPLRDTFAWNSLLRAHLVDGNCWQTILVYRHMLLCGVRPDRHTLPAVLRASGL 111


>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 686

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = -3

Query: 172 QPFDQVPLTNTFAWNSLLRSH-NNNNPFQSLLSLRSMLLAGFLPASRTLPLALTASRL 2
           QP D++PL++TFAWN+L+ SH  N +PF +L     MLL G LP  RT P  L ASRL
Sbjct: 52  QPLDEIPLSDTFAWNNLIHSHLTNRDPFSALSIYLHMLLRGALPDRRTFPRVLNASRL 109


>ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -3

Query: 256 PLQCSSLPPVTQKTPTNAQTPKTHLLAHQPFDQVPLTNTFAWNSLLRSHNNNNPFQSLLS 77
           P+ C+S     Q+   N QTP+   LAH+ FD +  ++T+AWN L+++H  NN F   +S
Sbjct: 18  PINCAS----QQRHSRNVQTPRKVALAHRAFDGMSHSDTYAWNKLIQTHIANNDFHYAVS 73

Query: 76  -LRSMLLAGFLPASRTLPLALTASRL 2
               ML  G  P   TLP AL+ASRL
Sbjct: 74  TYDQMLHRGVRPDRHTLPRALSASRL 99


>ref|XP_010910564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Elaeis guineensis]
          Length = 669

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = -3

Query: 178 AHQPFDQVPLTNTFAWNSLLRSH-NNNNPFQSLLSLRSMLLAGFLPASRTLPLALTASRL 2
           A+QP DQ+PL +TFAWNSLLR++  + N ++++L  R MLL G  P  RTLP  L AS L
Sbjct: 53  AYQPLDQIPLRDTFAWNSLLRAYLVDGNSWKTILVYRHMLLCGARPDHRTLPAVLRASGL 112


>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -3

Query: 181 LAHQPFDQVPLTNTFAWNSLLRSHNNNNPFQSLLS-LRSMLLAGFLPASRTLPLALTASR 5
           L HQ FD++P++NTFAWN+L+++H  N     ++S  R MLL G  P   T+P  LTA+R
Sbjct: 45  LTHQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAAR 104


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -3

Query: 181 LAHQPFDQVPLTNTFAWNSLLRSHNNNNPFQSLLS-LRSMLLAGFLPASRTLPLALTASR 5
           L HQ FD++P++NTFAWN+L+++H  N     ++S  R MLL G  P   T+P  LTA+R
Sbjct: 140 LTHQLFDEIPVSNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAAR 199


>ref|XP_011020921.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Populus euphratica]
          Length = 666

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -3

Query: 208 NAQTPKTHLLAHQPFDQVPLTNTFAWNSLLRSH-NNNNPFQSLLSLRSMLLAGFLPASRT 32
           +A+ P    L H+  D+ PL++TFAWN+L+ +H +N +P  +L     M++ G  P  RT
Sbjct: 37  SARFPGELALTHKVLDETPLSDTFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRT 96

Query: 31  LPLALTASRL 2
           LP  LTASR+
Sbjct: 97  LPRVLTASRI 106


>ref|XP_012483355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Gossypium raimondii]
           gi|763766015|gb|KJB33230.1| hypothetical protein
           B456_006G003200 [Gossypium raimondii]
          Length = 658

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = -3

Query: 181 LAHQPFDQVPLTNTFAWNSLLRSH-NNNNPFQSLLSLRSMLLAGFLPASRTLPLALTASR 5
           LAH+  D++P    +AWN L+++H +NN+P  +L     M+L G  P   TLP  LTASR
Sbjct: 40  LAHKVVDEIPQPKAYAWNQLIQTHLSNNHPHNALSVYHGMMLRGIRPDHHTLPRVLTASR 99

Query: 4   L 2
           L
Sbjct: 100 L 100


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