BLASTX nr result

ID: Anemarrhena21_contig00040088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00040088
         (484 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI88607.1| ribosomal protein S3, partial (mitochondrion) [Di...    43   3e-06

>gb|ADI88607.1| ribosomal protein S3, partial (mitochondrion) [Dioscorea
           althaeoides]
          Length = 408

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -2

Query: 156 TEKE*NKVRGRGEGKNLSKIRLDN*EKQNEIHI 58
           TE+E N+VRGRG GK +  IRLD+ EKQNE  I
Sbjct: 6   TEEERNEVRGRGAGKRVESIRLDDREKQNERRI 38



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 83  ERSKTKSIFD*KTQHYGYHGRSPSRKK 3
           E+   + I+  K Q YGYH RSPSRKK
Sbjct: 31  EKQNERRIWPKKMQRYGYHDRSPSRKK 57


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