BLASTX nr result
ID: Anemarrhena21_contig00040020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00040020
(438 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 45 1e-08
ref|XP_009775659.1| PREDICTED: uncharacterized protein LOC104225... 39 2e-07
ref|XP_009622334.1| PREDICTED: uncharacterized protein LOC104113... 37 6e-07
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 42 1e-06
ref|XP_009803538.1| PREDICTED: uncharacterized protein LOC104248... 41 1e-06
ref|XP_010236203.1| PREDICTED: uncharacterized protein LOC104583... 41 2e-06
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 43 4e-06
ref|XP_009779776.1| PREDICTED: uncharacterized protein LOC104228... 40 6e-06
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 45.1 bits (105), Expect(2) = 1e-08
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -1
Query: 246 VRTIEGESKLFSITIGLHQGLIFNPYLFVLLIMNLLG 136
VRT EG+++ F IT+GLHQG +PYLF L++ L G
Sbjct: 349 VRTYEGQTESFPITVGLHQGSSLSPYLFALVMDELTG 385
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 23/42 (54%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 437 IEAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE-FSRGIV 315
+EAIYLL+ ME Y++ ++ DL+MVFIDLEK+Y+ SR I+
Sbjct: 282 MEAIYLLRRLMERYRDGKK--DLHMVFIDLEKAYDRVSRDII 321
>ref|XP_009775659.1| PREDICTED: uncharacterized protein LOC104225533 [Nicotiana
sylvestris]
Length = 344
Score = 39.3 bits (90), Expect(3) = 2e-07
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -1
Query: 246 VRTIEGESKLFSITIGLHQGLIFNPYLFVL 157
VRT G+ + F I IGLHQGL F+P+LF L
Sbjct: 88 VRTTGGDFEYFPIEIGLHQGLAFSPFLFSL 117
Score = 33.9 bits (76), Expect(3) = 2e-07
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = -2
Query: 434 EAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE 333
EAI++++ +E Y+ ++E L+MVFIDLEKSY+
Sbjct: 22 EAIHIVRRFVEQYKAMKKE--LHMVFIDLEKSYD 53
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 175 PLSFCITHYEFTRHIQDGVS*CMLFTDYYIINQCIRG 65
P F + TRHI+ V CMLF D ++ RG
Sbjct: 112 PFLFSLAMDALTRHIEGKVPWCMLFADDIVLIDETRG 148
>ref|XP_009622334.1| PREDICTED: uncharacterized protein LOC104113760 [Nicotiana
tomentosiformis]
Length = 385
Score = 37.4 bits (85), Expect(3) = 6e-07
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -1
Query: 246 VRTIEGESKLFSITIGLHQGLIFNPYLFVL 157
VRT+ G+S+ F + +GLHQG +P+LF L
Sbjct: 306 VRTVGGDSEHFPVVMGLHQGSALSPFLFAL 335
Score = 35.8 bits (81), Expect(3) = 6e-07
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = -2
Query: 434 EAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE 333
E I+L++ +E Y+E R++DL+MVFIDLEK Y+
Sbjct: 240 ECIHLVRRLVEQYRE--RKKDLHMVFIDLEKMYD 271
Score = 25.8 bits (55), Expect(3) = 6e-07
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 181 IQPLSFCITHYEFTRHIQDGVS*CMLFT-DYYIINQCIRG 65
+ P F + +RHIQ V C+LF D +I++ RG
Sbjct: 328 LSPFLFALAMDVLSRHIQGEVPWCILFADDIVLIDETRRG 367
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -1
Query: 246 VRTIEGESKLFSITIGLHQGLIFNPYLFVLLI 151
VRT GES F ITIGLHQG +PYLF L++
Sbjct: 74 VRTQGGESDDFPITIGLHQGSTLSPYLFTLIL 105
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = -2
Query: 437 IEAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE 333
+EAIYLL+ ME Y + ++DL+++FIDLEK+Y+
Sbjct: 7 MEAIYLLRRVMEQY--RMAQQDLHLIFIDLEKAYD 39
>ref|XP_009803538.1| PREDICTED: uncharacterized protein LOC104248886 [Nicotiana
sylvestris]
Length = 307
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 246 VRTIEGESKLFSITIGLHQGLIFNPYLFVLLIMN 145
VRT++G+S F I +GLHQG +P+LF L+I++
Sbjct: 267 VRTVDGDSDHFPIMMGLHQGSALSPFLFALVIIS 300
Score = 38.1 bits (87), Expect(2) = 1e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = -2
Query: 434 EAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE 333
E I+L++ ME Y+E R++DL+MVFIDLEK+Y+
Sbjct: 201 EVIHLVRRLMEQYRE--RKKDLHMVFIDLEKAYD 232
>ref|XP_010236203.1| PREDICTED: uncharacterized protein LOC104583892 [Brachypodium
distachyon]
Length = 429
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 20/35 (57%), Positives = 30/35 (85%)
Frame = -2
Query: 437 IEAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE 333
+EAI+L++ ME Y+EK++ DL+MVFIDLEK+Y+
Sbjct: 107 MEAIFLVRQLMERYKEKKK--DLHMVFIDLEKAYD 139
Score = 37.4 bits (85), Expect(2) = 2e-06
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = -1
Query: 306 KIKKYLMSILR*LYVFWSRWVRTIEGESKLFSITIGLHQGLIFNPYLFVLLI 151
K+ +++++ +Y VRT +G++ F I IGLHQG +PYLF L++
Sbjct: 154 KVPAKYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLFDLVM 205
>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
chalumnae]
Length = 1500
Score = 42.7 bits (99), Expect(2) = 4e-06
Identities = 23/42 (54%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 437 IEAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE-FSRGIV 315
I+AI+ LK ME Y+EKR+ DL+MVF+DLEK+Y+ RG++
Sbjct: 479 IDAIFALKILMEKYKEKRK--DLHMVFVDLEKAYDRVPRGLI 518
Score = 34.3 bits (77), Expect(2) = 4e-06
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = -1
Query: 303 IKKYLMSILR*LYVFWSRWVRTIEGESKLFSITIGLHQGLIFNPYLFVLLIMNL 142
I + + +++ +Y WVR+ G + F + +G+ QG +P+LF+L++ L
Sbjct: 527 IPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQGSALSPFLFILVLDTL 580
>ref|XP_009779776.1| PREDICTED: uncharacterized protein LOC104228920 [Nicotiana
sylvestris]
Length = 143
Score = 40.4 bits (93), Expect(2) = 6e-06
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = -1
Query: 246 VRTIEGESKLFSITIGLHQGLIFNPYLFVLLI 151
VRT+ G+S+ F + +GLHQG F+P+LF L++
Sbjct: 68 VRTVGGDSEYFPVMMGLHQGSSFSPFLFALVM 99
Score = 36.2 bits (82), Expect(2) = 6e-06
Identities = 17/35 (48%), Positives = 30/35 (85%)
Frame = -2
Query: 437 IEAIYLLK*SME*YQEKRRERDLYMVFIDLEKSYE 333
+EAI+L++ M+ Y ++R++DL+M+FIDLEK+Y+
Sbjct: 1 MEAIHLVRKLMKQY--RKRKQDLHMMFIDLEKAYD 33