BLASTX nr result
ID: Anemarrhena21_contig00039822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00039822
(304 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012069884.1| PREDICTED: 50S ribosomal protein L28, chloro... 101 2e-19
ref|XP_008224150.1| PREDICTED: 50S ribosomal protein L28, chloro... 100 6e-19
ref|XP_007223657.1| hypothetical protein PRUPE_ppa012783mg [Prun... 100 6e-19
ref|XP_011462293.1| PREDICTED: 50S ribosomal protein L28, chloro... 99 8e-19
ref|XP_011030453.1| PREDICTED: 50S ribosomal protein L28, chloro... 99 1e-18
ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Popu... 99 1e-18
gb|ABK95755.1| unknown [Populus trichocarpa] 99 1e-18
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] 99 1e-18
ref|XP_010475103.1| PREDICTED: 50S ribosomal protein L28, chloro... 98 2e-18
ref|XP_010457490.1| PREDICTED: 50S ribosomal protein L28, chloro... 97 5e-18
ref|XP_010483813.1| PREDICTED: 50S ribosomal protein L28, chloro... 97 5e-18
ref|XP_009795876.1| PREDICTED: 50S ribosomal protein L28, chloro... 97 5e-18
ref|XP_009630927.1| PREDICTED: 50S ribosomal protein L28, chloro... 96 9e-18
ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutr... 95 2e-17
emb|CDY23733.1| BnaC04g43890D [Brassica napus] 94 3e-17
ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arab... 94 4e-17
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana... 94 5e-17
ref|XP_010469469.1| PREDICTED: 50S ribosomal protein L28, chloro... 92 2e-16
ref|XP_010509883.1| PREDICTED: 50S ribosomal protein L28, chloro... 92 2e-16
ref|XP_009334220.1| PREDICTED: 50S ribosomal protein L28, chloro... 92 2e-16
>ref|XP_012069884.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Jatropha
curcas] gi|643733421|gb|KDP40368.1| hypothetical protein
JCGZ_02366 [Jatropha curcas]
Length = 149
Score = 101 bits (252), Expect = 2e-19
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 RLSLTKTK--VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGK 83
+LS +KT VSELGFVTSQL G++ISND P +QPV+ARR+C FTGK
Sbjct: 26 KLSTSKTSDAVSELGFVTSQLSGIRISND----LPQRANPFSSPAIQPVVARRVCPFTGK 81
Query: 82 RFNRANKVSFSNHKTKKVQFVNLQYKR 2
+ NRANKVSFSNHKTKK+QFVNLQYK+
Sbjct: 82 KANRANKVSFSNHKTKKLQFVNLQYKK 108
>ref|XP_008224150.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Prunus mume]
Length = 154
Score = 99.8 bits (247), Expect = 6e-19
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = -1
Query: 232 VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVSF 53
VS++GFVTSQLGG+KIS D P LQP++ARRIC FTGK+ NRANK+SF
Sbjct: 37 VSDIGFVTSQLGGIKISYDMSSQLPKSISTSSPPTLQPIVARRICPFTGKKSNRANKISF 96
Query: 52 SNHKTKKVQFVNLQYKR 2
S HKTKK+QFVNLQYKR
Sbjct: 97 SAHKTKKLQFVNLQYKR 113
>ref|XP_007223657.1| hypothetical protein PRUPE_ppa012783mg [Prunus persica]
gi|462420593|gb|EMJ24856.1| hypothetical protein
PRUPE_ppa012783mg [Prunus persica]
Length = 154
Score = 99.8 bits (247), Expect = 6e-19
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = -1
Query: 232 VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVSF 53
VS++GFVTSQLGG+KIS D P LQP++ARRIC FTGK+ NRANK+SF
Sbjct: 37 VSDIGFVTSQLGGIKISYDMSSQLPKSISIFSPPALQPIVARRICPFTGKKSNRANKISF 96
Query: 52 SNHKTKKVQFVNLQYKR 2
S HKTKK+QFVNLQYKR
Sbjct: 97 SAHKTKKLQFVNLQYKR 113
>ref|XP_011462293.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 150
Score = 99.4 bits (246), Expect = 8e-19
Identities = 52/85 (61%), Positives = 61/85 (71%)
Frame = -1
Query: 256 RLSLTKTKVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRF 77
RLS VS++GFVTSQL GLKIS+D P LQP++ARRIC FTGK+
Sbjct: 25 RLSSKTQAVSDVGFVTSQLSGLKISHDMSSQLPSPIFTPSLPGLQPIVARRICPFTGKKA 84
Query: 76 NRANKVSFSNHKTKKVQFVNLQYKR 2
N+ANK+SFS HKTKK+QFVNLQYKR
Sbjct: 85 NKANKISFSAHKTKKLQFVNLQYKR 109
>ref|XP_011030453.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Populus
euphratica]
Length = 153
Score = 99.0 bits (245), Expect = 1e-18
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Frame = -1
Query: 256 RLSLTKTK---VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTG 86
+LS++KT VSE+GFVTSQL G++IS + P LQPVIARRIC FTG
Sbjct: 29 QLSISKTSLVSVSEIGFVTSQLSGIRISYN----PPKPLSAPFSPALQPVIARRICPFTG 84
Query: 85 KRFNRANKVSFSNHKTKKVQFVNLQYKR 2
K+ NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 85 KKANRANKVSFSNHKTKKLQFVNLQYKR 112
>ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Populus trichocarpa]
gi|550329333|gb|EEF01745.2| hypothetical protein
POPTR_0010s07920g [Populus trichocarpa]
Length = 153
Score = 99.0 bits (245), Expect = 1e-18
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Frame = -1
Query: 256 RLSLTKTK---VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTG 86
+LS++KT VSE+GFVTSQL G++IS + P LQPVIARRIC FTG
Sbjct: 29 QLSISKTSLVSVSEIGFVTSQLSGIRISYN----PPKPLSAPFSPALQPVIARRICPFTG 84
Query: 85 KRFNRANKVSFSNHKTKKVQFVNLQYKR 2
K+ NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 85 KKANRANKVSFSNHKTKKLQFVNLQYKR 112
>gb|ABK95755.1| unknown [Populus trichocarpa]
Length = 150
Score = 99.0 bits (245), Expect = 1e-18
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Frame = -1
Query: 256 RLSLTKTK---VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTG 86
+LS++KT VSE+GFVTSQL G++IS + P LQPVIARRIC FTG
Sbjct: 26 QLSISKTSLVSVSEIGFVTSQLSGIRISYN----PPKPLSAPFSPALQPVIARRICPFTG 81
Query: 85 KRFNRANKVSFSNHKTKKVQFVNLQYKR 2
K+ NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 82 KKANRANKVSFSNHKTKKLQFVNLQYKR 109
>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 153
Score = 99.0 bits (245), Expect = 1e-18
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Frame = -1
Query: 256 RLSLTKTK---VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTG 86
+LS++KT VSE+GFVTSQL G++IS + P LQPVIARRIC FTG
Sbjct: 29 QLSISKTSLVSVSEIGFVTSQLSGIRISYN----PPEPLSAPFSPALQPVIARRICPFTG 84
Query: 85 KRFNRANKVSFSNHKTKKVQFVNLQYKR 2
K+ NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 85 KKANRANKVSFSNHKTKKLQFVNLQYKR 112
>ref|XP_010475103.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 142
Score = 98.2 bits (243), Expect = 2e-18
Identities = 48/78 (61%), Positives = 59/78 (75%)
Frame = -1
Query: 235 KVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVS 56
K +ELGF+TSQL G++IS+ + +LQPV+ARRIC FTGK+ NRANKVS
Sbjct: 24 KSTELGFLTSQLSGVRISHGYSDVINRIALPSVPSLLQPVVARRICPFTGKKANRANKVS 83
Query: 55 FSNHKTKKVQFVNLQYKR 2
FSNHKTKK+QFVNLQYK+
Sbjct: 84 FSNHKTKKLQFVNLQYKK 101
>ref|XP_010457490.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa] gi|727569961|ref|XP_010457491.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic-like [Camelina
sativa] gi|727569963|ref|XP_010457492.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 142
Score = 96.7 bits (239), Expect = 5e-18
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = -1
Query: 235 KVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVS 56
K +ELGF+TSQL G++IS + +LQP++ARRIC FTGK+ NRANKVS
Sbjct: 24 KSTELGFLTSQLSGVRISYGYSDVINCIALPSAPSLLQPIVARRICPFTGKKANRANKVS 83
Query: 55 FSNHKTKKVQFVNLQYKR 2
FSNHKTKK+QFVNLQYK+
Sbjct: 84 FSNHKTKKLQFVNLQYKK 101
>ref|XP_010483813.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa] gi|727430296|ref|XP_010483822.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 142
Score = 96.7 bits (239), Expect = 5e-18
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = -1
Query: 235 KVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVS 56
K +ELGF+TSQL G++IS + +LQP++ARRIC FTGK+ NRANKVS
Sbjct: 24 KSTELGFLTSQLSGVRISYGYSDVINRIALPSAPSLLQPIVARRICPFTGKKANRANKVS 83
Query: 55 FSNHKTKKVQFVNLQYKR 2
FSNHKTKK+QFVNLQYK+
Sbjct: 84 FSNHKTKKLQFVNLQYKK 101
>ref|XP_009795876.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nicotiana
sylvestris]
Length = 151
Score = 96.7 bits (239), Expect = 5e-18
Identities = 57/86 (66%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = -1
Query: 256 RLSLTKTKV-SELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKR 80
R SL K K+ SEL FVTSQL GLKIS+ H P LQPV ARRIC FTGK+
Sbjct: 26 RASLPKLKLRSELSFVTSQLSGLKISSTHFSSSAAPLSVPFKPSLQPV-ARRICPFTGKK 84
Query: 79 FNRANKVSFSNHKTKKVQFVNLQYKR 2
NRANKVS SNHKTKK+QFVNLQYKR
Sbjct: 85 SNRANKVSHSNHKTKKLQFVNLQYKR 110
>ref|XP_009630927.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nicotiana
tomentosiformis] gi|400992|sp|P30956.1|RK28_TOBAC
RecName: Full=50S ribosomal protein L28, chloroplastic;
AltName: Full=CL28; Flags: Precursor [Nicotiana tabacum]
gi|279656|pir||R5NT28 ribosomal protein L28 precursor,
chloroplast - tobacco gi|189096147|pdb|3BBO|Y Chain Y,
Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|20016|emb|CAA48211.1| ribosomal protein CL28
[Nicotiana tabacum]
Length = 151
Score = 95.9 bits (237), Expect = 9e-18
Identities = 56/86 (65%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = -1
Query: 256 RLSLTKTKVS-ELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKR 80
R SL ++K+S EL FVTSQL GLKIS+ H P LQPV ARRIC FTGK+
Sbjct: 26 RASLPQSKLSSELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQPV-ARRICPFTGKK 84
Query: 79 FNRANKVSFSNHKTKKVQFVNLQYKR 2
NRANKVS SNHKTKK+QFVNLQYKR
Sbjct: 85 SNRANKVSHSNHKTKKLQFVNLQYKR 110
>ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutrema salsugineum]
gi|557111658|gb|ESQ51942.1| hypothetical protein
EUTSA_v10017390mg [Eutrema salsugineum]
Length = 142
Score = 94.7 bits (234), Expect = 2e-17
Identities = 48/78 (61%), Positives = 58/78 (74%)
Frame = -1
Query: 235 KVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVS 56
K +ELGF+TSQL G++IS+ P LQP++ARRIC FTGK+ NRANKVS
Sbjct: 24 KSTELGFLTSQLSGVRISHGPPSDVISRISVPSFPGLQPIVARRICPFTGKKANRANKVS 83
Query: 55 FSNHKTKKVQFVNLQYKR 2
FSNHKTKK+QFVNLQYK+
Sbjct: 84 FSNHKTKKLQFVNLQYKK 101
>emb|CDY23733.1| BnaC04g43890D [Brassica napus]
Length = 142
Score = 94.4 bits (233), Expect = 3e-17
Identities = 49/83 (59%), Positives = 59/83 (71%)
Frame = -1
Query: 250 SLTKTKVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNR 71
S + K +ELGF++SQL GL+IS P LQP++ARRIC FTGK+ NR
Sbjct: 19 SKSVAKPTELGFLSSQLSGLRISQGPSSDVINRISLSSFPGLQPIVARRICPFTGKKANR 78
Query: 70 ANKVSFSNHKTKKVQFVNLQYKR 2
ANKVSFSNHKTKK+QFVNLQYK+
Sbjct: 79 ANKVSFSNHKTKKLQFVNLQYKK 101
>ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata] gi|297338060|gb|EFH68477.1| 50S ribosomal
protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 137
Score = 94.0 bits (232), Expect = 4e-17
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = -1
Query: 253 LSLTKTKVSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFN 74
+S++ TK +ELG +TSQL G++IS+ + LQP++ARRIC FTGK+ N
Sbjct: 14 VSVSPTKSTELGSLTSQLSGVRISHGYSDAINRITLPSVPS-LQPIVARRICPFTGKKAN 72
Query: 73 RANKVSFSNHKTKKVQFVNLQYKR 2
RANKVSFSNHKTKK+QFVNLQYK+
Sbjct: 73 RANKVSFSNHKTKKLQFVNLQYKK 96
>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 93.6 bits (231), Expect = 5e-17
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -1
Query: 250 SLTKTKVS--ELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRF 77
S+TK+ V+ ELGF+TSQL GL+IS + QP++ARRIC FTGK+
Sbjct: 19 SMTKSTVTSKELGFLTSQLSGLRISYTPSDVINRISLPSFPGI-QPIVARRICPFTGKKA 77
Query: 76 NRANKVSFSNHKTKKVQFVNLQYKR 2
NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 78 NRANKVSFSNHKTKKLQFVNLQYKR 102
>ref|XP_010469469.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 143
Score = 91.7 bits (226), Expect = 2e-16
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -1
Query: 250 SLTKTKVS--ELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRF 77
S+ K+ V+ ELGF+TSQL G++IS+ + QP++ARRIC FTGK+
Sbjct: 19 SVAKSTVTSKELGFLTSQLSGVRISHSPSDVTSRISVPSFPGI-QPIVARRICPFTGKKA 77
Query: 76 NRANKVSFSNHKTKKVQFVNLQYKR 2
NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 78 NRANKVSFSNHKTKKLQFVNLQYKR 102
>ref|XP_010509883.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Camelina
sativa] gi|727476096|ref|XP_010413860.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic [Camelina sativa]
Length = 143
Score = 91.7 bits (226), Expect = 2e-16
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -1
Query: 250 SLTKTKVS--ELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRF 77
S+ K+ V+ ELGF+TSQL G++IS+ + QP++ARRIC FTGK+
Sbjct: 19 SVAKSTVTSKELGFLTSQLSGVRISHSPSDVINRISVPSFPGI-QPIVARRICPFTGKKA 77
Query: 76 NRANKVSFSNHKTKKVQFVNLQYKR 2
NRANKVSFSNHKTKK+QFVNLQYKR
Sbjct: 78 NRANKVSFSNHKTKKLQFVNLQYKR 102
>ref|XP_009334220.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Pyrus x
bretschneideri]
Length = 154
Score = 91.7 bits (226), Expect = 2e-16
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -1
Query: 232 VSELGFVTSQLGGLKISNDHXXXXXXXXXXXXXPVLQPVIARRICRFTGKRFNRANKVSF 53
VS++GFVTSQL G++IS D P LQP++ARRIC FTGK+ NRANK+SF
Sbjct: 38 VSDVGFVTSQLSGVRISYD-MSSQLPSISTPSLPALQPIVARRICPFTGKKANRANKISF 96
Query: 52 SNHKTKKVQFVNLQYKR 2
S HKTKK+QFVNLQYKR
Sbjct: 97 SAHKTKKLQFVNLQYKR 113