BLASTX nr result
ID: Anemarrhena21_contig00039312
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00039312
(364 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449... 86 2e-19
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 82 1e-18
gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japoni... 79 1e-18
emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group] 80 1e-18
gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subc... 78 2e-18
gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japo... 78 2e-18
gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subc... 80 3e-18
emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group] 79 3e-18
gb|ABA96256.1| retrotransposon protein, putative, Ty1-copia subc... 80 5e-18
emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group] 74 9e-18
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc... 79 9e-18
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 79 9e-18
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 79 9e-18
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa... 79 9e-18
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo... 79 9e-18
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc... 79 9e-18
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 79 9e-18
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc... 79 9e-18
dbj|BAB03249.1| polyprotein [Oryza sativa] 79 9e-18
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group] 79 9e-18
>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
Length = 2699
Score = 86.3 bits (212), Expect(3) = 2e-19
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN G+ +SQL+YSQ+IGSL+ Y+ N TRPD++ AV +LSRYTSNP++EHW L +V RY
Sbjct: 2522 KNKGDAISQLEYSQVIGSLM--YLMNSTRPDLAYAVSRLSRYTSNPAQEHWDALVQVLRY 2579
Query: 172 LRGTVGYDL 146
L+ T+ Y L
Sbjct: 2580 LKNTLDYGL 2588
Score = 28.9 bits (63), Expect(3) = 2e-19
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y++Y +E ++D NW++D+T K
Sbjct: 2590 YTKYPPIVEGFSDANWISDTTESK 2613
Score = 26.9 bits (58), Expect(3) = 2e-19
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMIA 3
ST+ YVF GGA + KS KQ IA
Sbjct: 2614 STSGYVFTLGGAAISWKSSKQKCIA 2638
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
guttatus]
Length = 1203
Score = 82.0 bits (201), Expect(3) = 1e-18
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN GE V QLKYSQ+IGSL+ Y+ N TRPDI+++V KLSR+TSNP +HW L +V RY
Sbjct: 348 KNCGEPVDQLKYSQIIGSLM--YVMNCTRPDIAHSVSKLSRFTSNPRNDHWNALTRVLRY 405
Query: 172 LRGTVGYDL 146
L+ T+ L
Sbjct: 406 LKYTLDLGL 414
Score = 28.9 bits (63), Expect(3) = 1e-18
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMIA 3
ST+ YVF GGA + KS KQT IA
Sbjct: 440 STSGYVFTIGGAAVSWKSTKQTCIA 464
Score = 28.5 bits (62), Expect(3) = 1e-18
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D NW++D+ K
Sbjct: 416 YTRYPSVLEGYSDANWISDTKDYK 439
>gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
gi|108710643|gb|ABF98438.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1318
Score = 78.6 bits (192), Expect(3) = 1e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1086 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1143
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1144 LKGTMSYGI 1152
Score = 32.0 bits (71), Expect(3) = 1e-18
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +ERY+D+NW++D+ +K
Sbjct: 1154 YTGYPKVLERYSDSNWISDADEIK 1177
Score = 28.5 bits (62), Expect(3) = 1e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1178 ATSGYVFTLGGGAVSWKSCKQTIL 1201
>emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
Length = 1183
Score = 80.1 bits (196), Expect(3) = 1e-18
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y++N TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 951 KNRRIARDQLRYSQIIGSLM--YLANATRPDISFAVSKLSRFVSNPGDDHWQTLERVMRY 1008
Query: 172 LRGTVGY 152
L+GT+ Y
Sbjct: 1009 LKGTMSY 1015
Score = 30.4 bits (67), Expect(3) = 1e-18
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 156 AMTYSEYLDAIERYNDTNWVTDSTSVK 76
A+ Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1016 AIHYTGYPKVLEGYSDSNWISDADEIK 1042
Score = 28.5 bits (62), Expect(3) = 1e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1043 ATSGYVFTLGGGAVSWKSCKQTIL 1066
>gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1288
Score = 78.2 bits (191), Expect(3) = 2e-18
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = -1
Query: 328 QLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRYLRGTVGYD 149
QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RYL+GT+ Y
Sbjct: 1092 QLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYG 1149
Query: 148 L 146
+
Sbjct: 1150 I 1150
Score = 32.0 bits (71), Expect(3) = 2e-18
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ YL +E Y+D+NW++D+ +K
Sbjct: 1152 YTGYLKVLEGYSDSNWISDADEIK 1175
Score = 28.5 bits (62), Expect(3) = 2e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1176 ATSGYVFTLGGGVVSWKSCKQTIL 1199
>gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 78.2 bits (191), Expect(3) = 2e-18
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = -1
Query: 328 QLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRYLRGTVGYD 149
QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RYL+GT+ Y
Sbjct: 1084 QLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYG 1141
Query: 148 L 146
+
Sbjct: 1142 I 1142
Score = 32.0 bits (71), Expect(3) = 2e-18
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ YL +E Y+D+NW++D+ +K
Sbjct: 1144 YTGYLKVLEGYSDSNWISDADEIK 1167
Score = 28.5 bits (62), Expect(3) = 2e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1168 ATSGYVFTLGGGVVSWKSCKQTIL 1191
>gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1083
Score = 79.7 bits (195), Expect(3) = 3e-18
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 851 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 908
Query: 172 LRGTVGYDL 146
L+GT+ Y++
Sbjct: 909 LKGTMSYEI 917
Score = 29.3 bits (64), Expect(3) = 3e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 919 YTGYPKVLEGYSDSNWISDADEIK 942
Score = 28.9 bits (63), Expect(3) = 3e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 943 ATSRYVFTLGGGAVSWKSCKQTIL 966
>emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
Length = 964
Score = 79.0 bits (193), Expect(3) = 3e-18
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = -1
Query: 364 SIALKNTGELV-SQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLE 188
S+ L+ +V QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE
Sbjct: 758 SVLLRKNRRIVRDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPRDDHWQALE 815
Query: 187 KVFRYLRGTVGY 152
+V RYL+GT+ Y
Sbjct: 816 RVMRYLKGTMSY 827
Score = 30.4 bits (67), Expect(3) = 3e-18
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 156 AMTYSEYLDAIERYNDTNWVTDSTSVK 76
A+ Y+ Y +E Y+D+NW++D+ +K
Sbjct: 828 AIHYTGYPKVLEGYSDSNWISDADGIK 854
Score = 28.5 bits (62), Expect(3) = 3e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 855 ATSGYVFTLGGGAVSWKSCKQTIL 878
>gb|ABA96256.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 506
Score = 79.7 bits (195), Expect(3) = 5e-18
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 364 SIALKNTGELV-SQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLE 188
S+ L+ +V QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE
Sbjct: 312 SVLLRKNRRIVRDQLRYSQIIGSLI--YLASATRPDISFAVSKLSRFVSNPGDDHWQALE 369
Query: 187 KVFRYLRGTVGYDL 146
+V RYL+GT+ Y +
Sbjct: 370 RVMRYLKGTMSYGI 383
Score = 29.3 bits (64), Expect(3) = 5e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 385 YTGYPKVLEGYSDSNWISDADEIK 408
Score = 28.1 bits (61), Expect(3) = 5e-18
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 74 TTIYVFMFGGATLF*KSCKQTMI 6
T+ YVF GG + KSCKQT++
Sbjct: 410 TSGYVFTLGGGAVSWKSCKQTIL 432
>emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group]
Length = 1537
Score = 73.9 bits (180), Expect(3) = 9e-18
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SN +HW LE+V RY
Sbjct: 1336 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNLVDDHWQALERVMRY 1393
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1394 LKGTMSYGI 1402
Score = 32.0 bits (71), Expect(3) = 9e-18
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ YL +E Y+D+NW++D+ +K
Sbjct: 1404 YTGYLKVLEGYSDSNWISDADEIK 1427
Score = 30.4 bits (67), Expect(3) = 9e-18
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG T+ KSCKQT++
Sbjct: 1428 ATSGYVFTLGGGTVSWKSCKQTIL 1451
>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1247 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWRALERVMRY 1304
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1305 LKGTMSYGI 1313
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1315 YTGYPKVLEGYSDSNWISDADEIK 1338
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1339 ATSGYVFTLGGGAVSWKSCKQTIL 1362
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1216 KNQRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1273
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1274 LKGTMSYGI 1282
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1284 YTGYPKVLEGYSDSNWISDADEIK 1307
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1308 ATSGYVFTLGGGAVSWKSCKQTIL 1331
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1181 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1238
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1239 LKGTMSYGI 1247
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1249 YTGYPKVLEGYSDSNWISDADEIK 1272
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1273 ATSGYVFTLGGGAVSWKSCKQTIL 1296
>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1408
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1176 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWRALERVMRY 1233
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1234 LKGTMSYGI 1242
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1244 YTGYPKVLEGYSDSNWISDADEIK 1267
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1268 ATSGYVFTLGGGAVSWKSCKQTIL 1291
>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1162 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1219
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1220 LKGTMSYGI 1228
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1230 YTGYPKVLEGYSDSNWISDADEIK 1253
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1254 ATSGYVFTLGGGAVSWKSCKQTIL 1277
>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1125 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1182
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1183 LKGTMSYGI 1191
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1193 YTGYPKVLEGYSDSNWISDADEIK 1216
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1217 ATSGYVFTLGGGAVSWKSCKQTIL 1240
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1181 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1238
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1239 LKGTMSYGI 1247
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1249 YTGYPKVLEGYSDSNWISDADEIK 1272
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1273 ATSGYVFTLGGGAVSWKSCKQTIL 1296
>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1138 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1195
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1196 LKGTMSYGI 1204
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1206 YTGYPKVLEGYSDSNWISDADEIK 1229
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1230 ATSGYVFTLGGGAVSWKSCKQTIL 1253
>dbj|BAB03249.1| polyprotein [Oryza sativa]
Length = 1268
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1036 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1093
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1094 LKGTMSYGI 1102
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1104 YTGYPKVLEGYSDSNWISDADEIK 1127
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1128 ATSGYVFTLGGGAVSWKSCKQTIL 1151
>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 78.6 bits (192), Expect(3) = 9e-18
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 352 KNTGELVSQLKYSQLIGSLLFLYISNRTRPDISNAVGKLSRYTSNPSREHWTVLEKVFRY 173
KN QL+YSQ+IGSL+ Y+++ TRPDIS AV KLSR+ SNP +HW LE+V RY
Sbjct: 1036 KNRRIARDQLRYSQIIGSLM--YLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRY 1093
Query: 172 LRGTVGYDL 146
L+GT+ Y +
Sbjct: 1094 LKGTMSYGI 1102
Score = 29.3 bits (64), Expect(3) = 9e-18
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 147 YSEYLDAIERYNDTNWVTDSTSVK 76
Y+ Y +E Y+D+NW++D+ +K
Sbjct: 1104 YTGYPKVLEGYSDSNWISDADEIK 1127
Score = 28.5 bits (62), Expect(3) = 9e-18
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 77 STTIYVFMFGGATLF*KSCKQTMI 6
+T+ YVF GG + KSCKQT++
Sbjct: 1128 ATSGYVFTLGGGAVSWKSCKQTIL 1151