BLASTX nr result

ID: Anemarrhena21_contig00037977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00037977
         (878 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66815.1| orf174 (mitochondrion) [Beta vulgaris subsp. vul...    84   9e-14
emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]    79   4e-12
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    55   8e-08

>dbj|BAD66815.1| orf174 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score = 84.3 bits (207), Expect = 9e-14
 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
 Frame = -1

Query: 278 VVYMKQLTPCFSHGLTLFHAEPPFFLIHRDKM*N*CQQFITEEGLTDRGSLTYTN----- 114
           V++    +PCFSH   LF   PP       K          ++GLT+ GSLT TN     
Sbjct: 21  VIFENDKSPCFSHRTILFPTSPPSPRSTETKCRAGANSSSRKKGLTEPGSLTNTNLIENT 80

Query: 113 -IIEKNCFFSILFVITLLPKALSNRSDHVDIPSTQHRS 3
            IIEKNC F IL  + LLP+AL NRS+H+DIPSTQHRS
Sbjct: 81  NIIEKNCLFCILSPVLLLPRALRNRSEHIDIPSTQHRS 118


>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -1

Query: 155 EEGLTDRGSLTYTNIIEKNCFFSILFVITLLPKALSNRSDHVDIPSTQHRS 3
           ++GLT+ GSLT TNIIEKNC F IL  + LLP+AL NRSDH+DIPSTQHRS
Sbjct: 37  KKGLTEPGSLTNTNIIEKNCLFCILSPVPLLPRALRNRSDHIDIPSTQHRS 87


>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 54.7 bits (130), Expect(2) = 8e-08
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   DDLCCVEGIST*SDRLLKAFGSNVITKSIEKKQFFSIIL 117
           DDLCCVEGIS  SDRL KA GS    +SI+K+QFFSIIL
Sbjct: 29  DDLCCVEGISICSDRLRKARGSKRTGESIQKRQFFSIIL 67



 Score = 30.0 bits (66), Expect(2) = 8e-08
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +3

Query: 150 FFRNELLALVLHFVSVDQEE 209
           FFR+ELLA   HFVSVD+ E
Sbjct: 85  FFRDELLAPARHFVSVDRGE 104


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