BLASTX nr result

ID: Anemarrhena21_contig00037246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00037246
         (254 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009383019.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_008787991.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_010907125.1| PREDICTED: pentatricopeptide repeat-containi...    83   6e-14
ref|XP_010907123.1| PREDICTED: pentatricopeptide repeat-containi...    83   6e-14
emb|CDP18423.1| unnamed protein product [Coffea canephora]             65   1e-08
ref|XP_010025581.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_012078614.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_008351607.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06

>ref|XP_009383019.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Musa acuminata subsp. malaccensis]
          Length = 877

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = -3

Query: 252 KLGNLDEALRNLRLLNPSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVWTFN 73
           K GNL ++L  LRLL PSILDYNG+LY Y +SG VS+  +A +F  +KRFGPC NVWTFN
Sbjct: 223 KAGNLTDSLNFLRLLVPSILDYNGLLYRYLRSGHVSVDALANLFAEMKRFGPCPNVWTFN 282

Query: 72  IIFNG 58
           I+FNG
Sbjct: 283 ILFNG 287


>ref|XP_008787991.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like [Phoenix dactylifera]
          Length = 761

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 43/84 (51%), Positives = 55/84 (65%)
 Frame = -3

Query: 252 KLGNLDEALRNLRLLNPSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVWTFN 73
           K GNL EAL  LRL+ PS+LDYN +L+CY KSG V +  +  +F+G+KRFGP  NVWTFN
Sbjct: 106 KGGNLVEALDVLRLMEPSVLDYNALLHCYLKSGRVCVDELWKVFEGMKRFGPYPNVWTFN 165

Query: 72  IIFNGXXXXXXXXXXXXXLEDMCS 1
            +FNG             +E+MCS
Sbjct: 166 ALFNGLCALGRLKDARFIVEEMCS 189


>ref|XP_010907125.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62720-like isoform X2 [Elaeis guineensis]
          Length = 666

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = -3

Query: 246 GNLDEALRNLRLLNPSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVWTFNII 67
           G L EAL  LRL+ PS+LD N +L+CY KSG V +  +  +F+G+KR GP  NVWTFN +
Sbjct: 108 GYLVEALDALRLMEPSVLDCNALLHCYLKSGRVCVDELRKVFEGMKRIGPYPNVWTFNTL 167

Query: 66  FNGXXXXXXXXXXXXXLEDMCS 1
           FNG             +E+MCS
Sbjct: 168 FNGMCTLGRLKDARFIVEEMCS 189


>ref|XP_010907123.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62720-like isoform X1 [Elaeis guineensis]
           gi|743874615|ref|XP_010907124.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g62720-like isoform X1 [Elaeis guineensis]
          Length = 762

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = -3

Query: 246 GNLDEALRNLRLLNPSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVWTFNII 67
           G L EAL  LRL+ PS+LD N +L+CY KSG V +  +  +F+G+KR GP  NVWTFN +
Sbjct: 108 GYLVEALDALRLMEPSVLDCNALLHCYLKSGRVCVDELRKVFEGMKRIGPYPNVWTFNTL 167

Query: 66  FNGXXXXXXXXXXXXXLEDMCS 1
           FNG             +E+MCS
Sbjct: 168 FNGMCTLGRLKDARFIVEEMCS 189


>emb|CDP18423.1| unnamed protein product [Coffea canephora]
          Length = 726

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
 Frame = -3

Query: 246 GNLDEALRNLRLLN-----PSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVW 82
           G L +AL  L ++      P++ DYN M+YCY KS  V    +  ++ G+KRFGPC N  
Sbjct: 62  GCLKQALDTLSMMRCVPGKPTVYDYNSMIYCYLKSEHVLFDELVEVYNGMKRFGPCPNAL 121

Query: 81  TFNIIFNGXXXXXXXXXXXXXLEDMC 4
           T+N + NG              E+MC
Sbjct: 122 TYNCLLNGMVKIGRLKYGIFVAEEMC 147


>ref|XP_010025581.1| PREDICTED: pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial-like [Eucalyptus grandis]
           gi|702450787|ref|XP_010025582.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial-like [Eucalyptus grandis]
           gi|629096307|gb|KCW62302.1| hypothetical protein
           EUGRSUZ_H04959 [Eucalyptus grandis]
          Length = 728

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -3

Query: 252 KLGNLDEALRNLRLL--NPSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVWT 79
           +LG   EAL ++  +   P+  DYN ++Y Y KSG V ++ +AG++ G+ RFGP  N  T
Sbjct: 73  QLGRALEALNSMGCVPGKPTAYDYNALMYRYLKSGDVVLEELAGVYHGMTRFGPAPNALT 132

Query: 78  FNIIFNG 58
           FN + NG
Sbjct: 133 FNTLLNG 139


>ref|XP_012078614.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Jatropha curcas]
           gi|802639968|ref|XP_012078615.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09900-like [Jatropha curcas]
           gi|802639970|ref|XP_012078616.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09900-like [Jatropha curcas]
           gi|643722533|gb|KDP32283.1| hypothetical protein
           JCGZ_13208 [Jatropha curcas]
          Length = 685

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = -3

Query: 246 GNLDEALRNLRLLN-----PSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVW 82
           G+  +AL  L  +      P++ D+N +++CYFKS +VS+Q +  ++  +KRFGP  N  
Sbjct: 46  GDFKQALYTLNFMGNISGKPTVYDFNKLMHCYFKSRNVSLQVLVELYLRMKRFGPSPNAL 105

Query: 81  TFNIIFNG 58
           TFNI+ NG
Sbjct: 106 TFNILCNG 113


>ref|XP_008351607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032216|ref|XP_008351608.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032218|ref|XP_008351609.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032220|ref|XP_008351610.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032222|ref|XP_008351611.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032224|ref|XP_008351612.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032226|ref|XP_008351613.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
           gi|658032228|ref|XP_008351614.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Malus domestica]
          Length = 714

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
 Frame = -3

Query: 246 GNLDEALRNLRLLN-----PSILDYNGMLYCYFKSGSVSIQRVAGIFQGLKRFGPCLNVW 82
           GN  +AL +L  +      P++ D+N ++Y Y KS +V +  V  ++ G+KRFGP  N  
Sbjct: 62  GNFAKALESLNSMGNVPGKPTVYDFNALVYSYLKSQTVLLDNVVQVYLGMKRFGPAPNAS 121

Query: 81  TFNIIFNG 58
           TFN + NG
Sbjct: 122 TFNALLNG 129


Top