BLASTX nr result
ID: Anemarrhena21_contig00036919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00036919
(760 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventr... 473 e-131
gb|AFB18347.1| RNA polymerase beta subunit, partial [Nolina atop... 473 e-131
gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe ... 472 e-130
gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemar... 466 e-129
gb|AFB18323.1| RNA polymerase beta subunit, partial [Asparagus o... 465 e-128
gb|AFB18348.1| RNA polymerase beta subunit, partial [Phormium te... 464 e-128
gb|AEX94338.1| RNA polymerase beta subunit (chloroplast) [Aphyll... 464 e-128
gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebo... 462 e-127
gb|AEX94352.1| RNA polymerase beta subunit (chloroplast) [Oziroe... 461 e-127
gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Aspara... 460 e-127
gb|AFB18338.1| RNA polymerase beta subunit, partial [Iris virgin... 459 e-127
gb|AFB18328.1| RNA polymerase beta subunit, partial [Chlorophytu... 459 e-127
gb|AEX94347.1| RNA polymerase beta subunit (chloroplast) [Phormi... 459 e-127
ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [C... 458 e-126
gb|AEX94360.1| RNA polymerase beta subunit (chloroplast) [Ophiop... 458 e-126
gb|AEX94356.1| RNA polymerase beta subunit (chloroplast) [Beauca... 458 e-126
gb|AEX94333.1| RNA polymerase beta subunit (chloroplast) [Tulbag... 457 e-126
gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera] 457 e-126
gb|AEX94363.1| RNA polymerase beta subunit (chloroplast) [Maiant... 457 e-126
gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichel... 456 e-126
>gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventricosa]
Length = 1077
Score = 473 bits (1217), Expect = e-131
Identities = 236/245 (96%), Positives = 238/245 (97%)
Frame = -3
Query: 737 INRKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL 558
INRKLKIKMLRNGNEGMSTIPGF+QIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL
Sbjct: 1 INRKLKIKMLRNGNEGMSTIPGFNQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL 60
Query: 557 FVERYQLVEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGT 378
FVERYQLVEP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT
Sbjct: 61 FVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGT 120
Query: 377 FIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARV 198
IVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARV
Sbjct: 121 SIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARV 180
Query: 197 SRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFAC 18
SRKQKISILVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFAC
Sbjct: 181 SRKQKISILVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFAC 240
Query: 17 VGGDP 3
VGGDP
Sbjct: 241 VGGDP 245
>gb|AFB18347.1| RNA polymerase beta subunit, partial [Nolina atopocarpa]
Length = 1080
Score = 473 bits (1216), Expect = e-131
Identities = 236/245 (96%), Positives = 238/245 (97%)
Frame = -3
Query: 737 INRKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL 558
INRKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL
Sbjct: 1 INRKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL 60
Query: 557 FVERYQLVEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGT 378
FVERYQLVEP I+ERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT
Sbjct: 61 FVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGT 120
Query: 377 FIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARV 198
IVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARV
Sbjct: 121 SIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARV 180
Query: 197 SRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFAC 18
SRKQKISILVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFAC
Sbjct: 181 SRKQKISILVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFAC 240
Query: 17 VGGDP 3
VGGDP
Sbjct: 241 VGGDP 245
>gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe parviflora]
Length = 1077
Score = 472 bits (1214), Expect = e-130
Identities = 235/245 (95%), Positives = 238/245 (97%)
Frame = -3
Query: 737 INRKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQL 558
INRKLKIKMLRNGNEGMSTIPGF+QIQFEGFCRFINQGL+EEFHKFPKIEDRDQEMEFQL
Sbjct: 1 INRKLKIKMLRNGNEGMSTIPGFNQIQFEGFCRFINQGLSEEFHKFPKIEDRDQEMEFQL 60
Query: 557 FVERYQLVEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGT 378
FVERYQLVEP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT
Sbjct: 61 FVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGT 120
Query: 377 FIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARV 198
IVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARV
Sbjct: 121 SIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARV 180
Query: 197 SRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFAC 18
SRKQKISILVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFAC
Sbjct: 181 SRKQKISILVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFAC 240
Query: 17 VGGDP 3
VGGDP
Sbjct: 241 VGGDP 245
>gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 1070
Score = 466 bits (1198), Expect = e-129
Identities = 231/237 (97%), Positives = 232/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPK+EDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKMEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGT IVNGIYR
Sbjct: 61 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AFB18323.1| RNA polymerase beta subunit, partial [Asparagus officinalis]
Length = 1072
Score = 465 bits (1197), Expect = e-128
Identities = 231/240 (96%), Positives = 234/240 (97%)
Frame = -3
Query: 722 KIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERY 543
KIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERY
Sbjct: 1 KIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERY 60
Query: 542 QLVEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNG 363
QLVEP I+ERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGTFIVNG
Sbjct: 61 QLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTFIVNG 120
Query: 362 IYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQK 183
IYRIVINQILQSPGIYYRSELDHNG SVYTSTIISDWGGRLELEIDRRTRIWARVSRKQK
Sbjct: 121 IYRIVINQILQSPGIYYRSELDHNGTSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQK 180
Query: 182 ISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
ISILVL SAMGLNLREILDNVCYPEIFLSF NDKEKKKI SKENAILEFYQQFAC+GGDP
Sbjct: 181 ISILVLSSAMGLNLREILDNVCYPEIFLSFSNDKEKKKIESKENAILEFYQQFACIGGDP 240
>gb|AFB18348.1| RNA polymerase beta subunit, partial [Phormium tenax]
Length = 1074
Score = 464 bits (1193), Expect = e-128
Identities = 230/240 (95%), Positives = 234/240 (97%)
Frame = -3
Query: 722 KIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERY 543
K+KMLRNGNEGMSTIPGFSQIQFEGFCRFINQGL+EEFHKFPKIEDRDQEM+FQLFVERY
Sbjct: 3 KLKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLSEEFHKFPKIEDRDQEMKFQLFVERY 62
Query: 542 QLVEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNG 363
QLVEP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFG+IPLMNSLGT IVNG
Sbjct: 63 QLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGNIPLMNSLGTSIVNG 122
Query: 362 IYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQK 183
IYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQK
Sbjct: 123 IYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQK 182
Query: 182 ISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
ISILVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 183 ISILVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 242
>gb|AEX94338.1| RNA polymerase beta subunit (chloroplast) [Aphyllanthes
monspeliensis]
Length = 1070
Score = 464 bits (1193), Expect = e-128
Identities = 230/237 (97%), Positives = 232/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQT+F G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTIFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVLLSAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLLSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebouria cordifolia]
Length = 1070
Score = 462 bits (1188), Expect = e-127
Identities = 229/237 (96%), Positives = 232/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRT+IWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTKIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMGLNL+EILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGLNLKEILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94352.1| RNA polymerase beta subunit (chloroplast) [Oziroe biflora]
Length = 1070
Score = 461 bits (1185), Expect = e-127
Identities = 229/237 (96%), Positives = 231/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMGLNL+EILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGLNLKEILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
gi|372481330|gb|AEX94340.1| RNA polymerase beta subunit
(chloroplast) [Asparagus asparagoides]
Length = 1070
Score = 460 bits (1183), Expect = e-127
Identities = 228/237 (96%), Positives = 231/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP I+ERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGTFIVNGIYR
Sbjct: 61 EPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTFIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNG SVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGTSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMGLNLREILDNVCYPEIFLSF NDKEKKKI SKENAILEFYQQFAC+GGDP
Sbjct: 181 LVLSSAMGLNLREILDNVCYPEIFLSFSNDKEKKKIESKENAILEFYQQFACIGGDP 237
>gb|AFB18338.1| RNA polymerase beta subunit, partial [Iris virginica]
Length = 1085
Score = 459 bits (1181), Expect = e-127
Identities = 230/249 (92%), Positives = 235/249 (94%)
Frame = -3
Query: 749 FFQ*INRKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEM 570
FF I RK KIKML NGNEGMSTIPGFSQIQFEGFCRFIN+GLAEEFHKFPKIEDRDQEM
Sbjct: 3 FFHSIKRKFKIKMLCNGNEGMSTIPGFSQIQFEGFCRFINRGLAEEFHKFPKIEDRDQEM 62
Query: 569 EFQLFVERYQLVEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMN 390
EFQLFVERYQLVEP IKERDAVYESLTYSSELYVPAGLIWKT R+MQQQTVF G+IPLMN
Sbjct: 63 EFQLFVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTSREMQQQTVFIGNIPLMN 122
Query: 389 SLGTFIVNGIYRIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRI 210
SLGT IVNGIYRIVINQILQSPGIYYRSELDHNG SVYTSTIISDWGGR ELEID+RTRI
Sbjct: 123 SLGTSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTSTIISDWGGRSELEIDKRTRI 182
Query: 209 WARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQ 30
WARVSRKQKISILVL SAMG NLR+ILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQ
Sbjct: 183 WARVSRKQKISILVLSSAMGSNLRDILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQ 242
Query: 29 QFACVGGDP 3
QFACVGGDP
Sbjct: 243 QFACVGGDP 251
>gb|AFB18328.1| RNA polymerase beta subunit, partial [Chlorophytum rhizopendulum]
Length = 1070
Score = 459 bits (1181), Expect = e-127
Identities = 227/238 (95%), Positives = 232/238 (97%)
Frame = -3
Query: 716 KMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQL 537
KML+NGNEGMSTIPGF+QIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQL
Sbjct: 1 KMLQNGNEGMSTIPGFNQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQL 60
Query: 536 VEPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIY 357
VEP IKERDAVYESLTYSSELYVPAGLIWKTG+DMQQQTVF G+IPLMNSLGT IVNGIY
Sbjct: 61 VEPLIKERDAVYESLTYSSELYVPAGLIWKTGKDMQQQTVFIGNIPLMNSLGTSIVNGIY 120
Query: 356 RIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKIS 177
RIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKIS
Sbjct: 121 RIVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKIS 180
Query: 176 ILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
ILVL SAMG NLREI+DNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 ILVLSSAMGSNLREIIDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 238
>gb|AEX94347.1| RNA polymerase beta subunit (chloroplast) [Phormium tenax]
Length = 1070
Score = 459 bits (1181), Expect = e-127
Identities = 228/237 (96%), Positives = 231/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGL+EEFHKFPKIEDRDQEM+FQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLSEEFHKFPKIEDRDQEMKFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFG+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
gi|372481304|gb|AEX94327.1| RNA polymerase beta subunit
(chloroplast) [Hosta ventricosa]
gi|578888858|gb|AHI16741.1| RNA polymerase beta subunit
(chloroplast) (chloroplast) [Cypripedium macranthos]
Length = 1070
Score = 458 bits (1179), Expect = e-126
Identities = 228/237 (96%), Positives = 230/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGF+QIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFNQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94360.1| RNA polymerase beta subunit (chloroplast) [Ophiopogon japonicus]
Length = 1073
Score = 458 bits (1178), Expect = e-126
Identities = 228/237 (96%), Positives = 230/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP I+ERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94356.1| RNA polymerase beta subunit (chloroplast) [Beaucarnea hookeri]
Length = 1073
Score = 458 bits (1178), Expect = e-126
Identities = 228/237 (96%), Positives = 230/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP I+ERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94333.1| RNA polymerase beta subunit (chloroplast) [Tulbaghia violacea]
Length = 1070
Score = 457 bits (1176), Expect = e-126
Identities = 228/237 (96%), Positives = 229/237 (96%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKT RDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTSRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera]
Length = 1069
Score = 457 bits (1175), Expect = e-126
Identities = 227/237 (95%), Positives = 230/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGF+QIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFNQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQ+TVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQKTVFIGTIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94363.1| RNA polymerase beta subunit (chloroplast) [Maianthemum stellatum]
Length = 1073
Score = 457 bits (1175), Expect = e-126
Identities = 227/237 (95%), Positives = 230/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP I+ERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVF G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDR+TRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRKTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVL SAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLSSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237
>gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma ida-maia]
Length = 1070
Score = 456 bits (1174), Expect = e-126
Identities = 226/237 (95%), Positives = 231/237 (97%)
Frame = -3
Query: 713 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 534
ML+NG++GMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV
Sbjct: 1 MLQNGSKGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDRDQEMEFQLFVERYQLV 60
Query: 533 EPPIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFFGSIPLMNSLGTFIVNGIYR 354
EP IKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQT+F G+IPLMNSLGT IVNGIYR
Sbjct: 61 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTIFIGNIPLMNSLGTSIVNGIYR 120
Query: 353 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRLELEIDRRTRIWARVSRKQKISI 174
IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGR ELEIDRRTRIWARVSRKQKISI
Sbjct: 121 IVINQILQSPGIYYRSELDHNGNSVYTSTIISDWGGRSELEIDRRTRIWARVSRKQKISI 180
Query: 173 LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDP 3
LVLLSAMG NLREILDNVCYPEIFLSF NDKEKKKIGSKENAILEFYQQFACVGGDP
Sbjct: 181 LVLLSAMGSNLREILDNVCYPEIFLSFSNDKEKKKIGSKENAILEFYQQFACVGGDP 237