BLASTX nr result

ID: Anemarrhena21_contig00036691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00036691
         (286 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     78   2e-12
gb|ABD63117.1| Retrotransposon gag protein [Asparagus officinalis]     64   3e-08

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 34/95 (35%), Positives = 60/95 (63%)
 Frame = -2

Query: 285 FLNRFYKDDIPVTINTLFATQ*GEDEPARRFIERFRNLSLQCSVSMPLDVLLQTCRRNFL 106
           FL RF++DD  V++ TL AT+  + E  + ++ERFR+++L+C   M    L++TCR N  
Sbjct: 623 FLARFFEDDTEVSVPTLLATKQKKGESIKAYVERFRSMALRCPSGMTQSTLVETCRHNLQ 682

Query: 105 DEVEVYMGSVKAHTWKELVEQAEIAEDLAKRLQGD 1
            ++   MG  +  +W++LV Q E AE++  R++ +
Sbjct: 683 TQLLAQMGVAECRSWRQLVSQGEQAEEIVARIKAE 717


>gb|ABD63117.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 161

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 33/95 (34%), Positives = 52/95 (54%)
 Frame = -2

Query: 285 FLNRFYKDDIPVTINTLFATQ*GEDEPARRFIERFRNLSLQCSVSMPLDVLLQTCRRNFL 106
           FL+ F+ DD  V+I TL   +  + E    F++RFRN ++ C   +  + +LQTC  N  
Sbjct: 43  FLSNFFDDDTEVSIGTLLDEKQKDGESVDNFVKRFRNKAMNCRDPITEEFILQTCHNNLS 102

Query: 105 DEVEVYMGSVKAHTWKELVEQAEIAEDLAKRLQGD 1
            +V   +G V + TWK+L  + E AE   KR + +
Sbjct: 103 IDVLEALGVVPSKTWKDLKMRGEQAEHFLKRKKAE 137


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