BLASTX nr result
ID: Anemarrhena21_contig00035866
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00035866
(279 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_040401547.1| hypothetical protein, partial [Cecembia lona... 106 7e-21
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni... 103 4e-20
gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subc... 103 4e-20
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 102 1e-19
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 102 1e-19
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 101 2e-19
ref|XP_010239208.1| PREDICTED: uncharacterized protein LOC104585... 100 4e-19
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 100 4e-19
ref|XP_012699999.1| PREDICTED: uncharacterized protein LOC101777... 100 5e-19
ref|XP_010239210.1| PREDICTED: uncharacterized protein LOC104585... 100 6e-19
ref|XP_010239195.1| PREDICTED: uncharacterized protein LOC104585... 100 6e-19
ref|XP_010236605.1| PREDICTED: uncharacterized protein LOC104584... 100 6e-19
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 100 6e-19
ref|XP_008650298.1| PREDICTED: uncharacterized protein LOC103631... 99 8e-19
ref|XP_008650258.1| PREDICTED: uncharacterized protein LOC103631... 99 8e-19
ref|XP_008650257.1| PREDICTED: uncharacterized protein LOC103631... 99 8e-19
ref|XP_008650254.1| PREDICTED: uncharacterized protein LOC103631... 99 8e-19
ref|XP_008650230.1| PREDICTED: uncharacterized protein LOC103630... 99 8e-19
ref|XP_008650203.1| PREDICTED: uncharacterized protein LOC103630... 99 8e-19
ref|XP_008650172.1| PREDICTED: uncharacterized protein LOC103630... 99 8e-19
>ref|WP_040401547.1| hypothetical protein, partial [Cecembia lonarensis]
Length = 319
Score = 106 bits (264), Expect = 7e-21
Identities = 48/92 (52%), Positives = 67/92 (72%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSVS TPYEI GRKPS+ H+KIW C +V+K KL+ R+ RC FVGYP+++
Sbjct: 168 LNRVPSKSVSQTPYEICIGRKPSLNHIKIWGCEAYVKKLEATKLEARSVRCYFVGYPRET 227
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQGYV 277
GY Y+P+DQ + V+R FL+D+ V +G +
Sbjct: 228 MGYEFYHPDDQKVFVARTAKFLEDEFVLKGTI 259
>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 547
Score = 103 bits (257), Expect = 4e-20
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C ++V++ DKL ++D+C FVGYPK++
Sbjct: 27 LNRVPSKSVDKTPYEIWTGKRPSLSLLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKET 86
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+R+ FLK + + +
Sbjct: 87 KGYYFYNREEGKVFVARHSVFLKKEFISR 115
>gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 562
Score = 103 bits (257), Expect = 4e-20
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C ++V++ DKL ++D+C FVGYPK++
Sbjct: 27 LNRVPSKSVDKTPYEIWTGKRPSLSLLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKET 86
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+R+ FLK + + +
Sbjct: 87 KGYYFYNREEGKVFVARHSVFLKKEFISR 115
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 102 bits (254), Expect = 1e-19
Identities = 42/89 (47%), Positives = 64/89 (71%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C ++V++ DKL ++++C FVGYPK++
Sbjct: 1112 LNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSNKCFFVGYPKET 1171
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+R+ FLK + + +
Sbjct: 1172 KGYYLYNREEGKVFVARHGVFLKKEFISR 1200
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 102 bits (253), Expect = 1e-19
Identities = 44/90 (48%), Positives = 62/90 (68%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR P+KSV TPYEIW G+ P++ LKIW C + ++ I DKL ++D+C FVGYPK++
Sbjct: 280 LNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYAKRLITDKLGPKSDKCYFVGYPKET 339
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQG 271
GYY Y+P D + V RN FL+ + + +G
Sbjct: 340 KGYYFYHPTDNKVFVVRNGAFLEREFLSKG 369
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 101 bits (251), Expect = 2e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LN++P+KSV+ TPYEIW G++PS+ LKIW C ++V++ DKL ++D+C FVGYPK++
Sbjct: 432 LNKVPSKSVNKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKET 491
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY YN + + V+R+ FL+ + +
Sbjct: 492 KGYYFYNREEGKVFVARHGVFLEKEFI 518
>ref|XP_010239208.1| PREDICTED: uncharacterized protein LOC104585019 [Brachypodium
distachyon]
Length = 480
Score = 100 bits (249), Expect = 4e-19
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C V++ DKL ++D+C+FVGYP+++
Sbjct: 346 LNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCDAFVKRLQSDKLTPKSDKCIFVGYPRET 405
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+RN FL+ + + +
Sbjct: 406 LGYYFYNRAEDKVFVARNGVFLEKEFLSR 434
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 100 bits (249), Expect = 4e-19
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LN +P+KSV TPYEIW G++PS+ LKIW C ++V++ DKL ++D+C FVGYPK++
Sbjct: 612 LNSVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKET 671
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+R+ FL+ + + +
Sbjct: 672 KGYYFYNQEEGKVFVARHGVFLEKEFISR 700
>ref|XP_012699999.1| PREDICTED: uncharacterized protein LOC101777835, partial [Setaria
italica]
Length = 552
Score = 100 bits (248), Expect = 5e-19
Identities = 42/87 (48%), Positives = 63/87 (72%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G+ PS+ LKIW C + V++ DK+ ++D+C+FVGYPK++
Sbjct: 103 LNRVPSKSVVKTPYEIWTGKVPSLSFLKIWGCEVFVKRLQSDKITPKSDKCIFVGYPKET 162
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY YN ++ + V+RN FL+ + +
Sbjct: 163 LGYYFYNRSEGKVFVARNGVFLEKEFL 189
>ref|XP_010239210.1| PREDICTED: uncharacterized protein LOC104585020 [Brachypodium
distachyon]
Length = 481
Score = 99.8 bits (247), Expect = 6e-19
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C V++ DKL ++D+C+FVGYP+++
Sbjct: 346 LNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCDAFVKRLQSDKLTPKSDKCIFVGYPRET 405
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+RN FL+ + + +
Sbjct: 406 LGYYFYNRAEGKVFVARNGVFLEKEFLSR 434
>ref|XP_010239195.1| PREDICTED: uncharacterized protein LOC104585011 [Brachypodium
distachyon]
Length = 444
Score = 99.8 bits (247), Expect = 6e-19
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C V++ DKL ++D+C+FVGYP+++
Sbjct: 308 LNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCDAFVKRLQSDKLTPKSDKCIFVGYPRET 367
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+RN FL+ + + +
Sbjct: 368 LGYYFYNRAEGKVFVARNGVFLEKEFLSR 396
>ref|XP_010236605.1| PREDICTED: uncharacterized protein LOC104584152 [Brachypodium
distachyon]
Length = 473
Score = 99.8 bits (247), Expect = 6e-19
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYEIW G++PS+ LKIW C V++ DKL ++D+C+FVGYP+++
Sbjct: 346 LNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCDAFVKRLQSDKLTPKSDKCIFVGYPRET 405
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+RN FL+ + + +
Sbjct: 406 LGYYFYNRAEGKVFVARNGVFLEKEFLSR 434
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 99.8 bits (247), Expect = 6e-19
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV T YEIW G++PS+ LKIW C ++V++ DKL ++D+C FVGYPK++
Sbjct: 430 LNRVPSKSVDKTSYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKET 489
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIVGQ 268
GYY YN + + V+R+ FL+ + + +
Sbjct: 490 KGYYFYNREEGKVFVARHSVFLEKEFISR 518
>ref|XP_008650298.1| PREDICTED: uncharacterized protein LOC103631070, partial [Zea mays]
Length = 348
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 250 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 309
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 310 LGYYFYHRSEGKVFVARNGVFLEKEFL 336
>ref|XP_008650258.1| PREDICTED: uncharacterized protein LOC103631015, partial [Zea mays]
Length = 364
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 266 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 325
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 326 LGYYFYHRSEGKVFVARNGVFLEKEFL 352
>ref|XP_008650257.1| PREDICTED: uncharacterized protein LOC103631014, partial [Zea mays]
Length = 364
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 266 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 325
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 326 LGYYFYHRSEGKVFVARNGVFLEKEFL 352
>ref|XP_008650254.1| PREDICTED: uncharacterized protein LOC103631012, partial [Zea mays]
Length = 392
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 294 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 353
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 354 LGYYFYHRSEGKVFVARNGVFLEKEFL 380
>ref|XP_008650230.1| PREDICTED: uncharacterized protein LOC103630987, partial [Zea mays]
Length = 354
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 256 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 315
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 316 LGYYFYHRSEGKVFVARNGVFLEKEFL 342
>ref|XP_008650203.1| PREDICTED: uncharacterized protein LOC103630957, partial [Zea mays]
Length = 628
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 186 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 245
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 246 LGYYFYHRSEGKVFVARNGVFLEKEFL 272
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 530 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 589
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 590 LGYYFYHRSEGKVFVARNGVFLEKEFL 616
>ref|XP_008650172.1| PREDICTED: uncharacterized protein LOC103630918, partial [Zea mays]
Length = 416
Score = 99.4 bits (246), Expect = 8e-19
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +2
Query: 2 LNRIPTKSVSSTPYEIWKGRKPSVRHLKIWDCPIHVRKQIMDKLKFRTDRCLFVGYPKDS 181
LNR+P+KSV TPYE+W G+ PS+ LKIW C ++V++ DKL ++D+C+FVGYPK++
Sbjct: 318 LNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMFVGYPKET 377
Query: 182 TGYYAYNPNDQTITVSRNVFFLKDQIV 262
GYY Y+ ++ + V+RN FL+ + +
Sbjct: 378 LGYYFYHRSEGKVFVARNGVFLEKEFL 404