BLASTX nr result
ID: Anemarrhena21_contig00035058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00035058
(321 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008791963.1| PREDICTED: cleavage and polyadenylation spec... 44 7e-09
ref|XP_008791966.1| PREDICTED: cleavage and polyadenylation spec... 44 7e-09
ref|XP_008791964.1| PREDICTED: cleavage and polyadenylation spec... 44 7e-09
ref|XP_010918167.1| PREDICTED: cleavage and polyadenylation spec... 44 6e-08
ref|XP_010918168.1| PREDICTED: cleavage and polyadenylation spec... 44 6e-08
ref|XP_012090388.1| PREDICTED: cleavage and polyadenylation spec... 42 1e-07
ref|XP_010109097.1| Cleavage and polyadenylation specificity fac... 42 2e-07
ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation spec... 44 3e-07
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun... 41 1e-06
ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation spec... 41 2e-06
ref|XP_010555627.1| PREDICTED: cleavage and polyadenylation spec... 42 2e-06
ref|XP_008343710.1| PREDICTED: cleavage and polyadenylation spec... 41 2e-06
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 39 3e-06
ref|XP_009374536.1| PREDICTED: cleavage and polyadenylation spec... 40 8e-06
>ref|XP_008791963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X1 [Phoenix dactylifera]
Length = 1456
Score = 44.3 bits (103), Expect(2) = 7e-09
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 92 PQAEERPIPNLVVTFSNLLEIYVVRVQEDD 3
P+ PIPNLVVT N+LEIY+VR+QEDD
Sbjct: 48 PKRRIGPIPNLVVTAGNVLEIYLVRIQEDD 77
Score = 42.0 bits (97), Expect(2) = 7e-09
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENCA+GFIT AD ++ I IQ D+L+ E++ KRR GP P
Sbjct: 9 MHWATGIENCAAGFITH-----SRAD-FAAQIPPIQADDLESEWSPKRRIGPIP 56
>ref|XP_008791966.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X3 [Phoenix dactylifera]
Length = 1455
Score = 44.3 bits (103), Expect(2) = 7e-09
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 92 PQAEERPIPNLVVTFSNLLEIYVVRVQEDD 3
P+ PIPNLVVT N+LEIY+VR+QEDD
Sbjct: 48 PKRRIGPIPNLVVTAGNVLEIYLVRIQEDD 77
Score = 42.0 bits (97), Expect(2) = 7e-09
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENCA+GFIT AD ++ I IQ D+L+ E++ KRR GP P
Sbjct: 9 MHWATGIENCAAGFITH-----SRAD-FAAQIPPIQADDLESEWSPKRRIGPIP 56
>ref|XP_008791964.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X2 [Phoenix dactylifera]
Length = 1455
Score = 44.3 bits (103), Expect(2) = 7e-09
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 92 PQAEERPIPNLVVTFSNLLEIYVVRVQEDD 3
P+ PIPNLVVT N+LEIY+VR+QEDD
Sbjct: 48 PKRRIGPIPNLVVTAGNVLEIYLVRIQEDD 77
Score = 42.0 bits (97), Expect(2) = 7e-09
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENCA+GFIT AD ++ I IQ D+L+ E++ KRR GP P
Sbjct: 9 MHWATGIENCAAGFITH-----SRAD-FAAQIPPIQADDLESEWSPKRRIGPIP 56
>ref|XP_010918167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X1 [Elaeis guineensis]
Length = 1456
Score = 43.9 bits (102), Expect(2) = 6e-08
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -2
Query: 92 PQAEERPIPNLVVTFSNLLEIYVVRVQEDD 3
P PIPNLVVT N+LEIY+VR+QEDD
Sbjct: 48 PMRRIGPIPNLVVTAGNVLEIYLVRIQEDD 77
Score = 39.3 bits (90), Expect(2) = 6e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENCA+GFIT L A PIQA D+L+ E++ RR GP P
Sbjct: 9 MHWATGIENCAAGFITH---SLVDFAAQMPPIQA---DDLESEWSPMRRIGPIP 56
>ref|XP_010918168.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X2 [Elaeis guineensis]
Length = 1455
Score = 43.9 bits (102), Expect(2) = 6e-08
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -2
Query: 92 PQAEERPIPNLVVTFSNLLEIYVVRVQEDD 3
P PIPNLVVT N+LEIY+VR+QEDD
Sbjct: 48 PMRRIGPIPNLVVTAGNVLEIYLVRIQEDD 77
Score = 39.3 bits (90), Expect(2) = 6e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENCA+GFIT L A PIQA D+L+ E++ RR GP P
Sbjct: 9 MHWATGIENCAAGFITH---SLVDFAAQMPPIQA---DDLESEWSPMRRIGPIP 56
>ref|XP_012090388.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Jatropha curcas] gi|643706250|gb|KDP22382.1|
hypothetical protein JCGZ_26213 [Jatropha curcas]
Length = 1456
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENCASGF+T CR AD V I ++Q DE++ E+ KR GP P
Sbjct: 9 MHWSTGIENCASGFLTH--CR---ADFVPQ-IPSVQTDEVESEWPAKRGIGPVP 56
Score = 40.0 bits (92), Expect(2) = 1e-07
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2
Query: 74 PIPNLVVTFSNLLEIYVVRVQED 6
P+PNL+VT N+LE+YVVRVQE+
Sbjct: 54 PVPNLIVTAGNVLEVYVVRVQEE 76
>ref|XP_010109097.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis] gi|587933947|gb|EXC20897.1| Cleavage and
polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 83 EERPIPNLVVTFSNLLEIYVVRVQEDD 3
E P+PNLVVT N+LE+YVVR+QE+D
Sbjct: 52 ETGPVPNLVVTAGNVLEVYVVRLQEED 78
Score = 39.3 bits (90), Expect(2) = 2e-07
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEF-AHKRRSGPSP 65
+H PT IENCA+GF++ P I IQ D+LD ++ A +R +GP P
Sbjct: 9 MHWPTGIENCAAGFVSHSRADFVPR------IPPIQSDDLDSDWPAGRRETGPVP 57
>ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Nelumbo nucifera]
Length = 1457
Score = 44.3 bits (103), Expect(2) = 3e-07
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -2
Query: 83 EERPIPNLVVTFSNLLEIYVVRVQEDD 3
E PIPNLVVT N+LE+YVVRVQE+D
Sbjct: 51 ETGPIPNLVVTAGNILEVYVVRVQEED 77
Score = 36.6 bits (83), Expect(2) = 3e-07
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRSGPSP 65
+H T IENC +GFIT ADA + + +Q DE + E+ ++ +GP P
Sbjct: 9 MHWATGIENCVAGFITH-----SSADA-APKLPPLQTDEFESEWTARKETGPIP 56
>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
gi|462416772|gb|EMJ21509.1| hypothetical protein
PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 41.2 bits (95), Expect(2) = 1e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 74 PIPNLVVTFSNLLEIYVVRVQEDD 3
PIP+LVVT N+LE+YVVRVQE+D
Sbjct: 55 PIPDLVVTAGNVLEVYVVRVQEED 78
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRS-GPSP 65
+H PT IENCASGFI+ P I IQ ++L+ E+ RR GP P
Sbjct: 9 MHWPTGIENCASGFISHSRSDFVPR------IPPIQTEDLESEWPTSRREIGPIP 57
>ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Prunus mume]
Length = 1459
Score = 41.2 bits (95), Expect(2) = 2e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 74 PIPNLVVTFSNLLEIYVVRVQEDD 3
PIP+LVVT N+LE+YVVRVQE+D
Sbjct: 55 PIPDLVVTAGNVLEVYVVRVQEED 78
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRS-GPSP 65
+H PT IENCASGFI+ P I IQ ++L+ E+ RR GP P
Sbjct: 9 MHWPTGIENCASGFISHSRSDFVPR------ILPIQTEDLESEWPTSRREIGPIP 57
>ref|XP_010555627.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X1 [Tarenaya hassleriana]
Length = 1445
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSP-IQAIQPDELDLEFAHKRRSGPSPTSLSP 50
+HCPT +ENCASG+IT + A S+P I AI DEL+ E+ +R + +L
Sbjct: 9 MHCPTGVENCASGYITH-------SRADSAPQIPAIPADELEAEWPSSKRGIGAVPNLVV 61
Query: 49 SA 44
SA
Sbjct: 62 SA 63
Score = 36.2 bits (82), Expect(2) = 2e-06
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -2
Query: 71 IPNLVVTFSNLLEIYVVRVQED 6
+PNLVV+ N+LE+YVVRVQE+
Sbjct: 56 VPNLVVSAGNVLEVYVVRVQEE 77
>ref|XP_008343710.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Malus domestica]
gi|658016721|ref|XP_008343711.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 1-like
isoform X2 [Malus domestica]
Length = 1450
Score = 41.2 bits (95), Expect(2) = 2e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 74 PIPNLVVTFSNLLEIYVVRVQEDD 3
PIP+LVVT N+LE+YVVRVQE+D
Sbjct: 55 PIPDLVVTAGNVLEVYVVRVQEED 78
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRS-GPSP 65
+H PT IENCASGFI+ P + IQ D+L+ ++ RR GP P
Sbjct: 9 MHWPTGIENCASGFISHSRADFVPR------MPQIQTDDLESDWPPTRREIGPIP 57
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 38.9 bits (89), Expect(2) = 3e-06
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -2
Query: 74 PIPNLVVTFSNLLEIYVVRVQED 6
P+PNL+VT ++LE+YVVRVQED
Sbjct: 55 PMPNLIVTAGSVLEVYVVRVQED 77
Score = 38.5 bits (88), Expect(2) = 3e-06
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEF-AHKRRSGPSP 65
LH PT IE+CASG+IT P I IQ D LD E+ KR GP P
Sbjct: 9 LHWPTGIESCASGYITHSRADFVP------QIPPIQTDNLDSEWPPSKRGIGPMP 57
>ref|XP_009374536.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform X1 [Pyrus x bretschneideri]
gi|694398760|ref|XP_009374537.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 1 isoform X2
[Pyrus x bretschneideri]
Length = 1447
Score = 39.7 bits (91), Expect(2) = 8e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -2
Query: 74 PIPNLVVTFSNLLEIYVVRVQEDD 3
PIP+LVVT N+LE+YVVRVQE++
Sbjct: 55 PIPDLVVTAGNVLEVYVVRVQEEE 78
Score = 36.2 bits (82), Expect(2) = 8e-06
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 226 LHCPTKIENCASGFITQPPCRLPPADAVSSPIQAIQPDELDLEFAHKRRS-GPSP 65
+H PT IENCASGFI+ P + +Q D+L+ ++ RR GP P
Sbjct: 9 MHWPTGIENCASGFISHSRADFVPR------MPQVQTDDLESDWPPTRREIGPIP 57