BLASTX nr result
ID: Anemarrhena21_contig00033531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00033531
(524 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 146 5e-37
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 138 1e-36
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 146 5e-35
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 152 1e-34
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 142 1e-34
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 139 2e-33
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 139 2e-33
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 139 2e-33
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 140 4e-33
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 139 5e-33
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 137 1e-32
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 137 1e-32
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 138 2e-32
gb|AFB73911.1| polyprotein [Citrus sinensis] 135 7e-32
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 142 7e-32
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 142 1e-31
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 136 2e-31
gb|AFB73912.1| polyprotein [Citrus sinensis] 134 3e-31
emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera] 140 3e-31
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 140 3e-31
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 146 bits (368), Expect(2) = 5e-37
Identities = 78/114 (68%), Positives = 88/114 (77%), Gaps = 7/114 (6%)
Frame = +3
Query: 204 MEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQKES 365
M +EMESL +N +LV K K +GCKWVFRKK D YKARLVAKGY+QKE
Sbjct: 801 MTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEG 860
Query: 366 VDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
VDY+EIFSPVVKHTSIRLLL+I A D+E+EQMDVKTAFLHG+LEE IYM QPE
Sbjct: 861 VDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPE 914
Score = 35.0 bits (79), Expect(2) = 5e-37
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 83 KPPTRYG*D-EDHVSFALVTEEGDPTCYREAIEAEES 190
KP R+G + E+ VS AL +GDPT Y +AIE+ ES
Sbjct: 758 KPIQRFGFEPEEDVSRALSISQGDPTTYEDAIESVES 794
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 138 bits (347), Expect(2) = 1e-36
Identities = 68/123 (55%), Positives = 95/123 (77%), Gaps = 7/123 (5%)
Frame = +3
Query: 177 RQKRATSTTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKKD------NEQYKARLV 338
++K M +E++ L +NQT LV+ +G +AIGCKWV++KK+ E++KARLV
Sbjct: 171 QEKSRWMGAMVEEIQFLHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGEKFKARLV 230
Query: 339 AKGYAQKESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMK 515
AKGY+Q++ VDY+EIFSP+V+HTSIR +L +VAH D++LEQMDV+T FLHG+LEE +YM
Sbjct: 231 AKGYSQRKGVDYDEIFSPMVRHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDLEELVYMV 290
Query: 516 QPE 524
QPE
Sbjct: 291 QPE 293
Score = 42.0 bits (97), Expect(2) = 1e-36
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 83 KPPTRYG*DEDHVSFALVTEEGDPTCYREAIEAEESDKY 199
KPPTRYG ED VS+AL+T DP ++EAI +E ++
Sbjct: 139 KPPTRYG-FEDLVSYALITSSKDPITFQEAIHNQEKSRW 176
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 146 bits (368), Expect(2) = 5e-35
Identities = 75/116 (64%), Positives = 92/116 (79%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
TTM EMESL++N T +LV L K K+I CKW+F++K D +YKARLVAKGY+Q
Sbjct: 575 TTMHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQI 634
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
S+D+N++FSP+VKH+SIR LL+IVA D ELEQMDVKTAFLHGELEE IYM+QPE
Sbjct: 635 PSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 690
Score = 28.1 bits (61), Expect(2) = 5e-35
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 DSDGGDVDATXXXXXXXXXXXXXXKPPTRYG*DEDHVSFAL-VTEE----GDPTCYREAI 175
DSD V + KPP RY + + V++AL V EE +P+ Y EAI
Sbjct: 506 DSDSSIVHQSPKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAI 565
Query: 176 EAEESDKY 199
+++ +++
Sbjct: 566 VSDDCNRW 573
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 152 bits (383), Expect = 1e-34
Identities = 77/114 (67%), Positives = 94/114 (82%), Gaps = 7/114 (6%)
Frame = +3
Query: 204 MEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKKDNE------QYKARLVAKGYAQKES 365
M +EMESL +NQT +LV + +G K +GCKWVF++K+ +YKARLVAKG++Q+E
Sbjct: 923 MSEEMESLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKGFSQREG 982
Query: 366 VDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
VDYNEIFSPVV+HTSIR+LLA+VAH DLELEQ+DVKTAFLHGELEE I M QPE
Sbjct: 983 VDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPE 1036
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 142 bits (359), Expect(2) = 1e-34
Identities = 75/114 (65%), Positives = 93/114 (81%), Gaps = 7/114 (6%)
Frame = +3
Query: 204 MEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKKD----NE--QYKARLVAKGYAQKES 365
+++EM+SL +N+T +LV K K +G KWVF++K NE +YKARLVAKG++QKE
Sbjct: 790 IQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEG 849
Query: 366 VDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
VDYNEIFSPVVKH+SIRLLLA VAH DLEL+Q+DVKTAFLHGEL+E IYM+ PE
Sbjct: 850 VDYNEIFSPVVKHSSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPE 903
Score = 30.4 bits (67), Expect(2) = 1e-34
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 83 KPPTRYG*DEDHVSFALVTEEG----DPTCYREAIEAEESDKY 199
KPP RYG + +FAL E +P Y+EAI + E+D++
Sbjct: 745 KPPKRYG-QAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQW 786
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 139 bits (350), Expect(2) = 2e-33
Identities = 75/115 (65%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFR-KKDN----EQYKARLVAKGYAQKE 362
T M +EME+L RN+T +LV+L KG KAIG KWV++ K+D E+Y+ARLV KGYAQKE
Sbjct: 805 TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864
Query: 363 SVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
+D+NEIFSPVV+ T+IR++LA+ A DL LEQ+DVKTAFLHGEL EEIYM QPE
Sbjct: 865 GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPE 919
Score = 30.0 bits (66), Expect(2) = 2e-33
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 116 HVSFALVTEEGDPTCYREAIEAEESDKY 199
H ++ L+TEEG+P+ + EA+ ++ ++
Sbjct: 776 HDAYCLITEEGEPSTFHEALNGSDASQW 803
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 139 bits (350), Expect(2) = 2e-33
Identities = 75/115 (65%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFR-KKDN----EQYKARLVAKGYAQKE 362
T M +EME+L RN+T +LV+L KG KAIG KWV++ K+D E+Y+ARLV KGYAQKE
Sbjct: 805 TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864
Query: 363 SVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
+D+NEIFSPVV+ T+IR++LA+ A DL LEQ+DVKTAFLHGEL EEIYM QPE
Sbjct: 865 GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPE 919
Score = 30.0 bits (66), Expect(2) = 2e-33
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 116 HVSFALVTEEGDPTCYREAIEAEESDKY 199
H ++ L+TEEG+P+ + EA+ ++ ++
Sbjct: 776 HDAYCLITEEGEPSTFHEALNGSDASQW 803
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 139 bits (350), Expect(2) = 2e-33
Identities = 75/115 (65%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFR-KKDN----EQYKARLVAKGYAQKE 362
T M +EME+L RN+T +LV+L KG KAIG KWV++ K+D E+Y+ARLV KGYAQKE
Sbjct: 805 TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864
Query: 363 SVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
+D+NEIFSPVV+ T+IR++LA+ A DL LEQ+DVKTAFLHGEL EEIYM QPE
Sbjct: 865 GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPE 919
Score = 30.0 bits (66), Expect(2) = 2e-33
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 116 HVSFALVTEEGDPTCYREAIEAEESDKY 199
H ++ L+TEEG+P+ + EA+ ++ ++
Sbjct: 776 HDAYCLITEEGEPSTFHEALNGSDASQW 803
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 140 bits (354), Expect(2) = 4e-33
Identities = 73/116 (62%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL++N T +LV L K K I CKW+F++K D +YKARLVAKGY+Q
Sbjct: 712 TAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQI 771
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSPV+KH+SIR LL+IVA D ELEQMDVKTAFLHGELEE IYM+QPE
Sbjct: 772 PGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPE 827
Score = 27.3 bits (59), Expect(2) = 4e-33
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 DSDGGDVDATXXXXXXXXXXXXXXKPPTRYG*DEDHVSFAL-VTEE----GDPTCYREAI 175
DSD V + KPP RY + + V++AL V EE +P+ Y EAI
Sbjct: 643 DSDSSAVQQSPKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAI 702
Query: 176 EAEESDKY 199
++ +++
Sbjct: 703 VSDGCNRW 710
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 139 bits (349), Expect(2) = 5e-33
Identities = 73/116 (62%), Positives = 87/116 (75%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL++N T +LV L K K I CKW+F++K D YKARLVAKGY+Q
Sbjct: 615 TAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKARLVAKGYSQI 674
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSPVVKH+SIR LL+IVA D ELEQMDVKTAFLHGELEE IYM+Q E
Sbjct: 675 PGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQSE 730
Score = 28.9 bits (63), Expect(2) = 5e-33
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 DSDGGDVDATXXXXXXXXXXXXXXKPPTRYG*DEDHVSFALVTEE-----GDPTCYREAI 175
DSD V + KPP RY + + V++AL E +P+ Y EAI
Sbjct: 546 DSDSSTVQQSPKRFIAKDKPKRNTKPPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAI 605
Query: 176 EAEESDKY 199
+++ +++
Sbjct: 606 VSDDCNRW 613
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 137 bits (346), Expect(2) = 1e-32
Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL +N T + V L K K I CKW+F++K D +YKARLVAKGY+Q
Sbjct: 868 TAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQI 927
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSP++KH+SIR LL IVA D ELEQMDVKTAFLHGELEE IYM+QPE
Sbjct: 928 PGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 983
Score = 28.5 bits (62), Expect(2) = 1e-32
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 DSDGGDVDATXXXXXXXXXXXXXXKPPTRYG*DEDHVSFAL-VTEE----GDPTCYREAI 175
DSD V + KPP RY + + V++AL V EE +P+ Y EAI
Sbjct: 799 DSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAI 858
Query: 176 EAEESDKY 199
+++ +++
Sbjct: 859 VSDDCNRW 866
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 137 bits (346), Expect(2) = 1e-32
Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL +N T + V L K K I CKW+F++K D +YKARLVAKGY+Q
Sbjct: 868 TAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQI 927
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSP++KH+SIR LL IVA D ELEQMDVKTAFLHGELEE IYM+QPE
Sbjct: 928 PGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 983
Score = 28.5 bits (62), Expect(2) = 1e-32
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 DSDGGDVDATXXXXXXXXXXXXXXKPPTRYG*DEDHVSFAL-VTEE----GDPTCYREAI 175
DSD V + KPP RY + + V++AL V EE +P+ Y EAI
Sbjct: 799 DSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAI 858
Query: 176 EAEESDKY 199
+++ +++
Sbjct: 859 VSDDCNRW 866
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 138 bits (348), Expect(2) = 2e-32
Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL++N + +L L K K I CKW+F++K D +YKARLVAKGY+Q
Sbjct: 742 TAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQI 801
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSPVVKH+SIR LL+IVA D ELEQMDVKTAFLHGELEE IYM+QPE
Sbjct: 802 PGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 857
Score = 27.3 bits (59), Expect(2) = 2e-32
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 DSDGGDVDATXXXXXXXXXXXXXXKPPTRYG*DEDHVSFAL-VTEE----GDPTCYREAI 175
DSD V + KPP RY + + V++AL V EE +P+ Y +AI
Sbjct: 673 DSDSSIVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAI 732
Query: 176 EAEESDKY 199
+++ +++
Sbjct: 733 VSDDCNRW 740
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 135 bits (340), Expect(2) = 7e-32
Identities = 71/115 (61%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFR-KKDN----EQYKARLVAKGYAQKE 362
T M++E+E+L +N+T +LV L +G KAIG KWV++ K+D E+Y+ARLV KGYAQKE
Sbjct: 809 TAMQEEIEALHKNKTWELVPLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 868
Query: 363 SVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
+D+NEIFSPVV+ T++R++LA+ A DL LEQ+DVKTAFLHGEL EEIYM QPE
Sbjct: 869 GIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPE 923
Score = 28.5 bits (62), Expect(2) = 7e-32
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2
Query: 83 KPPTRYG*--DEDHVSFALVTEEGDPTCYREAIEAEE 187
+PPT + E +V++ L+TE+G+P+ + EA+ + +
Sbjct: 767 RPPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSSD 803
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 142 bits (359), Expect = 7e-32
Identities = 76/114 (66%), Positives = 89/114 (78%), Gaps = 7/114 (6%)
Frame = +3
Query: 204 MEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKKDN------EQYKARLVAKGYAQKES 365
M EMESL +NQT LV G K I CKWVF+KK+ +YKAR+VA+G+ Q+E
Sbjct: 810 MGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREG 869
Query: 366 VDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
VDYNEIFSPVV+HTSIR+LLAIVAH +LELEQ+DVKTAFLHGEL EEIYM QP+
Sbjct: 870 VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPD 923
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 142 bits (357), Expect = 1e-31
Identities = 74/116 (63%), Positives = 88/116 (75%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL++N T +LV L K K I CKW+F++K D YKARLVAKGY+Q
Sbjct: 219 TAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAMYKARLVAKGYSQI 278
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSPVVKH+SIR LL+IVA D ELEQMDVKTAFLHGELEE IYM+QPE
Sbjct: 279 PGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 334
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 136 bits (343), Expect(2) = 2e-31
Identities = 73/113 (64%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Frame = +3
Query: 204 MEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFR-KKDN----EQYKARLVAKGYAQKESV 368
M++E+E+L RN T +LV+L KG KAIG KWVF+ K+D E+Y+ARLV KGYAQKE +
Sbjct: 807 MQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGI 866
Query: 369 DYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
D+NEIFSPVV+ T+IR++LA+ A +L LEQ+DVKTAFLHGEL EEIYM QPE
Sbjct: 867 DFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQPE 919
Score = 25.8 bits (55), Expect(2) = 2e-31
Identities = 7/25 (28%), Positives = 18/25 (72%)
Frame = +2
Query: 116 HVSFALVTEEGDPTCYREAIEAEES 190
H ++ L++E+G+P+ + EA+ ++
Sbjct: 776 HDAYCLLSEDGEPSTFHEAVNGSDA 800
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 134 bits (337), Expect(2) = 3e-31
Identities = 71/115 (61%), Positives = 92/115 (80%), Gaps = 6/115 (5%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFR-KKDN----EQYKARLVAKGYAQKE 362
T M++E+E+L +N+T +LV L G KAIG KWV++ K+D E+Y+ARLV KGYAQKE
Sbjct: 809 TAMQEEIEALHKNKTWELVPLPHGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 868
Query: 363 SVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
+D+NEIFSPVV+ T++R++LA+ A DL LEQ+DVKTAFLHGEL EEIYM QPE
Sbjct: 869 GIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPE 923
Score = 27.7 bits (60), Expect(2) = 3e-31
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +2
Query: 83 KPPTRYG*--DEDHVSFALVTEEGDPTCYREAIEA 181
+PPT + E +V++ L+TE+G+P+ + EA+ +
Sbjct: 767 RPPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNS 801
>emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]
Length = 444
Score = 140 bits (354), Expect = 3e-31
Identities = 73/114 (64%), Positives = 90/114 (78%), Gaps = 7/114 (6%)
Frame = +3
Query: 204 MEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQKES 365
M++E ESL +N T LVD KG K +GCKWVF+KK + E++KARLVAKGY Q+E
Sbjct: 210 MQEEFESLFQNGTRLLVDKPKGCKVVGCKWVFKKKLGIPGVEPERFKARLVAKGYTQREG 269
Query: 366 VDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGEL-EEIYMKQPE 524
VD+NEIFSP VKHTSI +LLA+V+ +LE+EQMDVKT FLHGEL EEI+M+QPE
Sbjct: 270 VDFNEIFSPAVKHTSIGVLLALVSLWNLEIEQMDVKTTFLHGELEEEIFMQQPE 323
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 140 bits (353), Expect = 3e-31
Identities = 72/116 (62%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
Frame = +3
Query: 198 TTMEQEMESLDRNQT*KLVDLSKGSKAIGCKWVFRKK------DNEQYKARLVAKGYAQK 359
T M EMESL++N T +LV L K K I CKW+F++K D +YKARL+AKGY+Q
Sbjct: 1040 TAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQI 1099
Query: 360 ESVDYNEIFSPVVKHTSIRLLLAIVAHGDLELEQMDVKTAFLHGELEE-IYMKQPE 524
+D+N++FSPVVKH+SIR LL+IVA D ELEQMDVKTAFLHGELEE IYM+QP+
Sbjct: 1100 PGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPK 1155