BLASTX nr result

ID: Anemarrhena21_contig00032855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00032855
         (339 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008781345.1| PREDICTED: pentatricopeptide repeat-containi...    41   2e-07
ref|XP_009408172.1| PREDICTED: pentatricopeptide repeat-containi...    42   7e-07
ref|XP_010935201.1| PREDICTED: pentatricopeptide repeat-containi...    42   1e-06

>ref|XP_008781345.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Phoenix dactylifera]
          Length = 427

 Score = 40.8 bits (94), Expect(2) = 2e-07
 Identities = 18/45 (40%), Positives = 30/45 (66%)
 Frame = -3

Query: 295 DIAHFYCDLVDASSDRKLKDFHLECYGRIKVMCYLGKGPFECTVR 161
           +I+ FYCDL++A S+R LKD  L+ Y R++ M    + P+E  ++
Sbjct: 127 EISLFYCDLIEAFSERGLKDLALDFYFRLREMPCSRRKPYESMIK 171



 Score = 40.4 bits (93), Expect(2) = 2e-07
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  EYRMVIQVYGQFRSFDEMRRVIGNMEDA 3
           E+R+V+Q YG+  SF EMRRV+G MEDA
Sbjct: 200 EFRLVLQSYGKLGSFAEMRRVLGIMEDA 227


>ref|XP_009408172.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Musa acuminata subsp. malaccensis]
          Length = 430

 Score = 42.4 bits (98), Expect(2) = 7e-07
 Identities = 17/46 (36%), Positives = 31/46 (67%)
 Frame = -3

Query: 298 RDIAHFYCDLVDASSDRKLKDFHLECYGRIKVMCYLGKGPFECTVR 161
           RD+A FYCDL++  S++ L+   LE Y R++ + + G+ P+E  ++
Sbjct: 129 RDLALFYCDLIECFSEQGLEQPVLETYARLREVPFAGRRPYESMIK 174



 Score = 37.4 bits (85), Expect(2) = 7e-07
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -2

Query: 86  EYRMVIQVYGQFRSFDEMRRVIGNMEDA 3
           E+R VIQ YG+     EMRRV+G+MEDA
Sbjct: 203 EFRSVIQSYGRSGLLSEMRRVVGSMEDA 230


>ref|XP_010935201.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Elaeis guineensis]
          Length = 434

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 20/46 (43%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = -3

Query: 295 DIAHFYCDLVDASSDRKLKDFHLECYGRI-KVMCYLGKGPFECTVR 161
           +I+ FYCDL++A S+R LKDF L+ Y R+ ++ C + K P+E  ++
Sbjct: 133 EISLFYCDLIEAFSERGLKDFALDFYSRLHEIPCSVRK-PYESMIK 177



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = -2

Query: 86  EYRMVIQVYGQFRSFDEMRRVIGNMEDA 3
           E+R+V+Q YG+  SF EM RV+G MEDA
Sbjct: 206 EFRLVMQSYGKSGSFAEMSRVLGIMEDA 233


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