BLASTX nr result

ID: Anemarrhena21_contig00029952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00029952
         (538 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010924258.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_008806919.1| PREDICTED: pentatricopeptide repeat-containi...    71   3e-10
ref|XP_011623638.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08

>ref|XP_010924258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Elaeis guineensis]
          Length = 599

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 40/81 (49%), Positives = 46/81 (56%)
 Frame = -2

Query: 246 KHQFHQLHAYIITSGLIHDPFLSGNLLESFLRIHPXXXXXXXXXXXXXXXXSTFMHNTLI 67
           KH  HQ HA  + SGLIHDPF++GNLLES LR+ P                S FM NTL+
Sbjct: 8   KH-LHQFHARAVVSGLIHDPFVAGNLLESLLRLDPSALAPALALFSHARARSPFMWNTLV 66

Query: 66  HAALSNNFPNAASKLFDQMLQ 4
           HA L N  P  A  LF QML+
Sbjct: 67  HAHLLNGLPTYALSLFAQMLR 87


>ref|XP_008806919.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Phoenix dactylifera]
          Length = 599

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 39/81 (48%), Positives = 46/81 (56%)
 Frame = -2

Query: 246 KHQFHQLHAYIITSGLIHDPFLSGNLLESFLRIHPXXXXXXXXXXXXXXXXSTFMHNTLI 67
           KH  HQ HA  + SGLIHDPF++GNLLES L + P                S FM NTL+
Sbjct: 8   KH-LHQFHARAVVSGLIHDPFVAGNLLESLLGLDPSALAPALALFSHAGARSPFMWNTLV 66

Query: 66  HAALSNNFPNAASKLFDQMLQ 4
           HA L+N  P  A  LF QML+
Sbjct: 67  HAHLANGLPTYALSLFAQMLR 87


>ref|XP_011623638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Amborella trichopoda]
          Length = 543

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 38/86 (44%), Positives = 48/86 (55%)
 Frame = -2

Query: 267 LLNSTTSKHQFHQLHAYIITSGLIHDPFLSGNLLESFLRIHPXXXXXXXXXXXXXXXXST 88
           LL+   +  Q HQLHAY I+SGL +DPF++GNL+ESFLR                   +T
Sbjct: 19  LLHKCLTLPQLHQLHAYTISSGLANDPFVAGNLIESFLRQESGNLSTAHVIFSLSPIQTT 78

Query: 87  FMHNTLIHAALSNNFPNAASKLFDQM 10
           FM+N LI A  S N P  A  L+ QM
Sbjct: 79  FMYNILIKAYASMNLP-LAIMLYTQM 103


Top