BLASTX nr result

ID: Anemarrhena21_contig00029485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00029485
         (1423 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD59438.1| Rps16 protein [Clivia gardenii]                        91   3e-22
gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium r...    65   2e-07
emb|CAD59435.1| Rps16 protein [Clivia nobilis]                         59   7e-06

>emb|CAD59438.1| Rps16 protein [Clivia gardenii]
          Length = 74

 Score = 90.5 bits (223), Expect(2) = 3e-22
 Identities = 46/51 (90%), Positives = 47/51 (92%), Gaps = 2/51 (3%)
 Frame = -1

Query: 745 GIVHDGARAKSIDSFIGGKNLGLVTINKLDQLCKYIFNI--EIKGLKFEQV 599
           GIVHDGAR KSIDSFIGGKNLGLVTINKLDQLCKYI NI  EI+GLKFEQV
Sbjct: 24  GIVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILNIEMEIEGLKFEQV 74



 Score = 44.3 bits (103), Expect(2) = 3e-22
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -3

Query: 803 IDIVCSVPARNLICVGLVNR 744
           IDIVCSVPARNLICVGLVNR
Sbjct: 3   IDIVCSVPARNLICVGLVNR 22


>gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium raimondii]
          Length = 75

 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 829 KWWM*ESTTNHVLQVARCFLPHRFKRSFTITFL 927
           KWW+  ST +HVLQVARCFLPHRFKRSFTITFL
Sbjct: 43  KWWVLTSTADHVLQVARCFLPHRFKRSFTITFL 75


>emb|CAD59435.1| Rps16 protein [Clivia nobilis]
          Length = 29

 Score = 59.3 bits (142), Expect = 7e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -2

Query: 861 MICCGFLHPPFSIGMKMLLNRHSLFCSC 778
           +I CGFL+PPFSIGMKMLLNRHSLFCSC
Sbjct: 2   LIRCGFLYPPFSIGMKMLLNRHSLFCSC 29


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