BLASTX nr result

ID: Anemarrhena21_contig00028746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00028746
         (426 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009420918.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_008787150.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...    53   4e-06

>ref|XP_009420918.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Musa acuminata subsp. malaccensis]
          Length = 746

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
 Frame = -1

Query: 294 SNNRIPLIRSCSSMI*RLQ-----MRSSLFQDPLISYAFVSRATLSP-HDLGCSRLVFGQ 133
           S + IPLIRSCS+    LQ     +RS L  DP IS AF+SRA L+P  DLG SRLVF +
Sbjct: 169 SGDCIPLIRSCSTKAHLLQIHARLLRSDLVHDPTISTAFLSRAALAPLRDLGYSRLVFER 228

Query: 132 IISPNVFQYDSTL 94
           I  P+VF  ++ L
Sbjct: 229 IPRPSVFHCNALL 241


>ref|XP_008787150.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530,
           partial [Phoenix dactylifera]
          Length = 602

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 43/97 (44%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
 Frame = -1

Query: 366 LFHKSLNISQHIRRQKNNQTASILSNNRIPLIRSCSSMI*RLQ-----MRSSLFQDPLIS 202
           L H+  N S   R Q N    S  +   IPLI SCS+    LQ     +RSSL  +P I+
Sbjct: 3   LLHQLRNPSPPPRFQPNT-FLSTFATTCIPLITSCSTKTHLLQIHARLLRSSLVDNPSIT 61

Query: 201 YAFVSRATLSP-HDLGCSRLVFGQIISPNVFQYDSTL 94
            AF+SRA LSP  D+  SR VF QI  P VF Y++ L
Sbjct: 62  TAFLSRAALSPLGDINYSRRVFEQIPKPTVFHYNTML 98


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score = 53.1 bits (126), Expect(2) = 4e-06
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
 Frame = -1

Query: 426 ACKTGKSPYLPASN*QSSLFLFHKSLNISQHIRRQKNNQTASILSNNRIPLIRSCSSMI* 247
           A  T   P+L +    S+    H+ L    H   +  +++     N  I LI+SCS    
Sbjct: 28  AFSTASLPFLDSEESPSTASENHRRLQHQTHPLPKSRDES----ENQLISLIKSCSKKTH 83

Query: 246 RLQ-----MRSSLFQDPLISYAFVSRATLSP-HDLGCSRLVFGQIISPNVFQYD 103
            LQ     +R+SL Q+  IS  F+SRA LSP  D+G S  VF QI+ P+  QY+
Sbjct: 84  LLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYN 137



 Score = 23.9 bits (50), Expect(2) = 4e-06
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 94  RACSKGSCPEKSFSLYRHMNGCNVVP 17
           RA S    PE+ F LYR M    V P
Sbjct: 141 RAYSMSHSPEQGFYLYREMRRRGVPP 166


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