BLASTX nr result

ID: Anemarrhena21_contig00027853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00027853
         (286 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33192.1| Polynucleotidyl transferase, Ribonuclease H fold ...    60   7e-07
ref|XP_007010351.1| Polynucleotidyl transferase, putative [Theob...    59   1e-06
gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                    57   4e-06
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]     57   4e-06

>gb|ABD33192.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 151

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = -3

Query: 206 LNTIYPSLHTPETPTETKEISWAKSRNESLILNVDGCSKGNPRRAGYGGVFRDSNGHWIK 27
           +N I  + HT   P   + + W  +  + ++LNVDG   G+P RAGYGG+FR+S   ++ 
Sbjct: 21  INVIQSTFHTTSVPQPDRLVRWNNNNFDCVVLNVDGSCLGSPIRAGYGGIFRNSADLFLS 80

Query: 26  GYCGNLGS 3
           G+ G L S
Sbjct: 81  GFSGYLAS 88


>ref|XP_007010351.1| Polynucleotidyl transferase, putative [Theobroma cacao]
           gi|508727264|gb|EOY19161.1| Polynucleotidyl transferase,
           putative [Theobroma cacao]
          Length = 419

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 17/93 (18%)
 Frame = -3

Query: 233 RQISLFSKDLNTIYPSLHTPETPTETKE-----------------ISWAKSRNESLILNV 105
           R ++LF K    I+P+  T +  T+ KE                 I+W K +N  + LNV
Sbjct: 208 RNMNLFDKSF--IWPANATKQVWTKAKEAWDTLGKENHRLKQEVLIAWEKPKNGYVKLNV 265

Query: 104 DGCSKGNPRRAGYGGVFRDSNGHWIKGYCGNLG 6
           DG +KG P  A  GGV RD  G+WI G+C  +G
Sbjct: 266 DGSAKGQPGLAASGGVIRDEYGNWIAGFCQKIG 298


>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 113  LNVDGCSKGNPRRAGYGGVFRDSNGHWIKGYCGNLG 6
            LNVDGC   NPR AGYGG+FRD +G+W+ G+ G+LG
Sbjct: 1185 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLG 1220


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 113  LNVDGCSKGNPRRAGYGGVFRDSNGHWIKGYCGNLG 6
            LNVDGC   NPR AGYGG+FRD +G+W+ G+ G+LG
Sbjct: 1368 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLG 1403


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