BLASTX nr result
ID: Anemarrhena21_contig00027525
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00027525
(302 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77976.1| hypothetical protein VITISV_010462 [Vitis vinifera] 84 3e-14
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 82 1e-13
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 80 5e-13
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera] 80 7e-13
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 79 2e-12
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 77 3e-12
gb|AAU10655.1| polyprotein [Oryza sativa Japonica Group] 77 6e-12
emb|CDY56387.1| BnaCnng30200D [Brassica napus] 76 8e-12
gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subc... 76 8e-12
gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subc... 76 1e-11
gb|AAM74293.1|AC083944_11 Putative transposable element [Oryza s... 76 1e-11
emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera] 75 2e-11
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 75 2e-11
gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sa... 73 7e-11
gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japoni... 73 7e-11
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 73 7e-11
gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group] 73 9e-11
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
>emb|CAN77976.1| hypothetical protein VITISV_010462 [Vitis vinifera]
Length = 288
Score = 84.3 bits (207), Expect = 3e-14
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Frame = +1
Query: 4 SLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVPNL---TINE-ISSSAY- 168
SLL G +L F K VL+ + G Y + G++K+++ N+ TIN+ SSAY
Sbjct: 68 SLLSKKGFKLVFXSDKLVLTKGGAFIGKGYMSEGLFKINVFNDNVIAXTINKSFMSSAYI 127
Query: 169 --SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S ELWH RLGHVNYR + M LGLL K N+ +KCE+CV++K
Sbjct: 128 VESCELWHSRLGHVNYRSMYKMSNLGLLXKFDINETQKCEICVESK 173
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 82.0 bits (201), Expect = 1e-13
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSI-SVPNLTINEISSSAY--- 168
GSLL + G RL F K VLS +Y G Y + GM+KL++ ++ +N+ S+S Y
Sbjct: 409 GSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLE 468
Query: 169 SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
SS LWH RLGHVNY L + L +P N KCE CV+AK
Sbjct: 469 SSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAK 512
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 80.1 bits (196), Expect = 5e-13
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSI-SVPNLTINEISSSAY--- 168
GSLL + G RL F+ K VLS +Y G Y + GM+KL++ ++ +N+ S+S Y
Sbjct: 409 GSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLE 468
Query: 169 SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
SS LWH RL HVNY L + L +P N KCE CV+AK
Sbjct: 469 SSNLWHGRLRHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAK 512
>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
Length = 487
Score = 79.7 bits (195), Expect = 7e-13
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Frame = +1
Query: 4 SLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVPNLTINEISSS----AY- 168
SLL G +L F+ K +L+ + G Y + G++K+++ N+ + I+ S AY
Sbjct: 132 SLLSKKGFKLVFESDKLMLTKSGTFVGKGYMSEGLFKINVFNDNVIASTINKSFMSFAYI 191
Query: 169 --SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S ELWH RLGHVNY + M LGLL K N+ +KCE+CV++K
Sbjct: 192 VESCELWHSRLGHVNYHSMYKMANLGLLLKFDINETQKCEICVESK 237
>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 78.6 bits (192), Expect = 2e-12
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS-VPNLTINEISSSAYSSE 177
GSLLC G RL F+ K V+S + G Y +GG+++ S+ + N +N +S S
Sbjct: 338 GSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGGLFRFSLDDMCNKVVNHVSDDDDESN 397
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH RL HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 398 VWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 438
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 77.4 bits (189), Expect = 3e-12
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS--VP-NLTINEISSSAY- 168
GSLL G +L F K VL+ +++ G Y + G++K+++ VP ++ N+I SSAY
Sbjct: 536 GSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVPKSINNNKIDSSAYL 595
Query: 169 --SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
SS +WH RLGHVNY L + L LPK + KCE CV++K
Sbjct: 596 LKSSNIWHGRLGHVNYDTLCRLIHLDYLPKFNIDPNHKCETCVESK 641
>gb|AAU10655.1| polyprotein [Oryza sativa Japonica Group]
Length = 1286
Score = 76.6 bits (187), Expect = 6e-12
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS-VPNLTINEISSSAYSSE 177
GSLLC G RL F+ K V+S + G Y +GG+++ S+ + N +N +S S
Sbjct: 481 GSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGGLFRFSLDDMCNKVVNHVSDDDDESN 540
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH +L HVN+ ++ + + L+PK K KC CVQ K
Sbjct: 541 VWHSQLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQTK 581
>emb|CDY56387.1| BnaCnng30200D [Brassica napus]
Length = 313
Score = 76.3 bits (186), Expect = 8e-12
Identities = 40/100 (40%), Positives = 56/100 (56%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVPNLTINEISSSAYSSEL 180
GSLL AG + F+ K VL ++ G + G+ K+ I T + ++
Sbjct: 172 GSLLSKAGFVVTFESDKFVLKKNDIFLGKGFVEDGLVKMCIKTVLFTNEPNAYLVEPFKV 231
Query: 181 WHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
WH+RLGHVNY+ + + L L+PKC +K EKCEVCVQAK
Sbjct: 232 WHERLGHVNYKYVQRLINLNLIPKCKLSK-EKCEVCVQAK 270
>gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 76.3 bits (186), Expect = 8e-12
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS-VPNLTINEISSSAYSSE 177
GSLLC G RL F+ K ++S + Y +GG+++ S+ + N +N +S+ S
Sbjct: 440 GSLLCRDGFRLVFESNKCIVSKYGTFIAKGYDSGGLFRFSLDDMCNKVVNHVSNDDDESN 499
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH RL HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 500 VWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 540
>gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1085
Score = 75.9 bits (185), Expect = 1e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS-VPNLTINEISSSAYSSE 177
GSLLC G RL F+ K V+S + G Y GG+++ S+ + N +N +S S
Sbjct: 348 GSLLCKGGFRLVFESNKCVVSKYGTFIGKGYDCGGLFRFSMDDMCNKVVNHVSDDDDESN 407
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH R HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 408 VWHSRHCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 448
>gb|AAM74293.1|AC083944_11 Putative transposable element [Oryza sativa Japonica Group]
Length = 1169
Score = 75.9 bits (185), Expect = 1e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS-VPNLTINEISSSAYSSE 177
GSLLC G RL F+ K V+S + G Y GG+++ S+ + N +N +S S
Sbjct: 419 GSLLCKGGFRLVFESNKCVVSKYGTFIGKGYDCGGLFRFSMDDMCNKVVNHVSDDDDESN 478
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH R HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 479 VWHSRHCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 519
>emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]
Length = 627
Score = 75.1 bits (183), Expect = 2e-11
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVPNLTINEISSSAY---- 168
GS+L G +L F+ K VL +Y G Y T G++K+++ L N +S +
Sbjct: 214 GSMLSKNGFKLVFESDKFVLMKNGMYVGKGYMTNGLFKMNVMTVKLDFNNNKASTFVYLI 273
Query: 169 -SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S LWH RLGHV+ + L + + LLP + KCEVCV+AK
Sbjct: 274 ESFTLWHDRLGHVSNKTLKRLINMNLLPSFSIDFKHKCEVCVEAK 318
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 74.7 bits (182), Expect = 2e-11
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 SLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSI--SVPNLTINEISSSAYSSE 177
SLLC G++L F+ K VLS + G +Y +GG+++LS+ + + +N + ++ +
Sbjct: 390 SLLCRQGLKLVFESNKVVLSKFGTFVGKSYESGGLFRLSVLNNHSSYHVNVVCNNDSINN 449
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH RL HVN+ + + + L+P+ K KC +CVQAK
Sbjct: 450 IWHSRLCHVNFEAIKRLSDMSLIPEYKHVKGVKCGICVQAK 490
>gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31429942|gb|AAP51926.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1109
Score = 73.2 bits (178), Expect = 7e-11
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVP---NLTINEISSSAYS 171
GSLLC G RL F+ K V+S + + G Y +GG+++ S++ + +N IS +
Sbjct: 459 GSLLCREGFRLVFESNKCVVSKYETFVGKGYDSGGLFRFSLNDMCNNHNVVNHISEND-E 517
Query: 172 SELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S +WH RL HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 518 SNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 560
>gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
gi|108710643|gb|ABF98438.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1318
Score = 73.2 bits (178), Expect = 7e-11
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVP---NLTINEISSSAYS 171
GSLLC G RL F+ K V+S + + G Y +GG+++ S++ + +N IS +
Sbjct: 488 GSLLCREGFRLVFKSNKCVVSKYETFVGKGYDSGGLFRFSLNDMCNNHNVVNHISEND-E 546
Query: 172 SELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S +WH RL HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 547 SNVWHSRLCHVNFSCMTRLANMSLIPKFTLVKGSKCHTCVQSK 589
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 73.2 bits (178), Expect = 7e-11
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVPNLTIN-EISSSAY--- 168
GSLL G R+ F+ VLS +Y G Y G++KL++ TIN + +SSAY
Sbjct: 398 GSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNVMTLKPTINNKATSSAYLLE 457
Query: 169 SSELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
SS +WH RLGHVN+ L + + +P + KC+ CV+AK
Sbjct: 458 SSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAK 501
>gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 72.8 bits (177), Expect = 9e-11
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVP---NLTINEISSSAYS 171
GSLLC G RL F+ K+V+S + G Y +GG+++ S++ + +N IS +
Sbjct: 454 GSLLCREGFRLVFESNKSVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNHISEND-E 512
Query: 172 SELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S +WH RL HVN+ ++ + + L+PK K KC CVQ+K
Sbjct: 513 SNMWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSK 555
>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1022
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSIS-VPNLTINEISSSAYSSE 177
GSLL G RL F+ K +S + G Y +GG+++ S+ + N +N +S S
Sbjct: 403 GSLLYKDGFRLVFESNKCGVSKYGTFIGKGYDSGGLFRFSLDDMCNKVVNHVSDDDDESN 462
Query: 178 LWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH RL HVN+ ++++ + L+PK K KC CVQ+K
Sbjct: 463 VWHSRLCHVNFGCMTSLANMSLIPKFTLVKGSKCHTCVQSK 503
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVP---NLTINEISSSAYS 171
GSLLC G RL F+ K V+S + + G Y +GG+++ S++ + +N IS +
Sbjct: 525 GSLLCREGFRLVFESNKCVVSKYETFVGKGYDSGGLFRFSLNDMCNNHNAVNHISEND-E 583
Query: 172 SELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
S +WH RL HVN+ + + + L+PK K KC CVQ+K
Sbjct: 584 SNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSKCHTCVQSK 626
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSLLCDAGMRLDFQGGKAVLSYKKVYFGNAYRTGGMYKLSISVPNLTINEIS--SSAYSS 174
GSLLC G RL F+ K V+S + G Y +GG+++ S++ N ++ S S
Sbjct: 482 GSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNHISEIDES 541
Query: 175 ELWHKRLGHVNYRKLSNMEKLGLLPKCGGNKPEKCEVCVQAK 300
+WH RL HVN+ L+ + + L+PK K KC CVQ+K
Sbjct: 542 NVWHSRLCHVNFGCLTRLANMSLIPKFTLVKGSKCHTCVQSK 583