BLASTX nr result

ID: Anemarrhena21_contig00026204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00026204
         (437 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008782042.1| PREDICTED: RNA-binding protein 25 [Phoenix d...    70   6e-10
ref|XP_009419246.1| PREDICTED: RNA-binding protein 25 isoform X3...    66   1e-08
ref|XP_009419245.1| PREDICTED: RNA-binding protein 25 isoform X2...    66   1e-08
ref|XP_009419244.1| PREDICTED: RNA-binding protein 25 isoform X1...    66   1e-08
ref|XP_008793873.1| PREDICTED: RNA-binding protein 25-like [Phoe...    64   5e-08
ref|XP_010928964.1| PREDICTED: uncharacterized protein LOC105050...    62   2e-07
ref|XP_010913584.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    62   2e-07

>ref|XP_008782042.1| PREDICTED: RNA-binding protein 25 [Phoenix dactylifera]
           gi|672117703|ref|XP_008782043.1| PREDICTED: RNA-binding
           protein 25 [Phoenix dactylifera]
          Length = 967

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 45/122 (36%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           FRPLG  P P YS                      G S PVS ++PG ASGAG+ TVS  
Sbjct: 84  FRPLGAPPAPPYSI---PNPSYQGPMAQNPGIQPPGVSGPVSIVLPGAASGAGAVTVSVS 140

Query: 290 PMR------YQPPNAPPMAYGQVTNGYMAF-------XXXXXXXXXXXXXXXYQTMVRPG 430
           PM+       QPP++ PM YGQ+ NGYM                        Y  M+RPG
Sbjct: 141 PMQPGGAYPVQPPHSAPMPYGQLHNGYMGVPAPSPQAPAAIPPPGVLRYPGPYPAMIRPG 200

Query: 431 FP 436
           FP
Sbjct: 201 FP 202


>ref|XP_009419246.1| PREDICTED: RNA-binding protein 25 isoform X3 [Musa acuminata subsp.
           malaccensis]
          Length = 931

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/115 (39%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           FRPLG  PVP YS +                    G  AP   M PG ASG   A    P
Sbjct: 72  FRPLGAPPVPHYSAVPNPMAQNPTFQAPGIQPP--GVPAPALMMPPGAASGGLPARPGVP 129

Query: 290 -PMRYQPPNAPPMAYGQVTNGYMAF-----XXXXXXXXXXXXXXXYQTMVRPGFP 436
             M  QPP A PM YGQV NGYMA                     Y TM+RPGFP
Sbjct: 130 YQMHGQPPGAAPMPYGQVGNGYMAMPTPQGPMGMPPPGMPRYPAPYPTMIRPGFP 184


>ref|XP_009419245.1| PREDICTED: RNA-binding protein 25 isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 947

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/115 (39%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           FRPLG  PVP YS +                    G  AP   M PG ASG   A    P
Sbjct: 72  FRPLGAPPVPHYSAVPNPMAQNPTFQAPGIQPP--GVPAPALMMPPGAASGGLPARPGVP 129

Query: 290 -PMRYQPPNAPPMAYGQVTNGYMAF-----XXXXXXXXXXXXXXXYQTMVRPGFP 436
             M  QPP A PM YGQV NGYMA                     Y TM+RPGFP
Sbjct: 130 YQMHGQPPGAAPMPYGQVGNGYMAMPTPQGPMGMPPPGMPRYPAPYPTMIRPGFP 184


>ref|XP_009419244.1| PREDICTED: RNA-binding protein 25 isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 948

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/115 (39%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           FRPLG  PVP YS +                    G  AP   M PG ASG   A    P
Sbjct: 72  FRPLGAPPVPHYSAVPNPMAQNPTFQAPGIQPP--GVPAPALMMPPGAASGGLPARPGVP 129

Query: 290 -PMRYQPPNAPPMAYGQVTNGYMAF-----XXXXXXXXXXXXXXXYQTMVRPGFP 436
             M  QPP A PM YGQV NGYMA                     Y TM+RPGFP
Sbjct: 130 YQMHGQPPGAAPMPYGQVGNGYMAMPTPQGPMGMPPPGMPRYPAPYPTMIRPGFP 184


>ref|XP_008793873.1| PREDICTED: RNA-binding protein 25-like [Phoenix dactylifera]
          Length = 964

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 45/125 (36%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           +RPLG  PVPQYS                      G  APV  M+ G ASGAG+ T S  
Sbjct: 87  WRPLGAPPVPQYSI---PNPSFLGPMAQNPSYQPPGILAPVPIMLHGAASGAGAVTASVS 143

Query: 290 PMRY---------QPPNAPPMAYGQVTNGYMAF-------XXXXXXXXXXXXXXXYQTMV 421
           PM           QPP++ P+ YGQV NGYM F                      Y TM 
Sbjct: 144 PMPPVGAYQFPPGQPPHSAPVPYGQVPNGYMGFPAPSPQAPAAIPPPWVPRYPAPYLTMT 203

Query: 422 RPGFP 436
            PGFP
Sbjct: 204 HPGFP 208


>ref|XP_010928964.1| PREDICTED: uncharacterized protein LOC105050579 [Elaeis guineensis]
          Length = 1710

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 43/122 (35%), Positives = 51/122 (41%), Gaps = 13/122 (10%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           FRPLG  PVPQYS                      G SAPV  M+PG  SGA ++    P
Sbjct: 87  FRPLGAPPVPQYSI---PFPSFRGPMAQNPSIQPPGISAPVRIMLPGAVSGATASVSPMP 143

Query: 290 PM------RYQPPNAPPMAYGQVTNGYMAF-------XXXXXXXXXXXXXXXYQTMVRPG 430
           P+        Q P++ P+ YGQV NGYM                        Y TM+RPG
Sbjct: 144 PVGAYQVPSGQLPHSAPVPYGQVPNGYMGVPAPSPWAPAAIPPPGVPRYPAPYPTMIRPG 203

Query: 431 FP 436
           FP
Sbjct: 204 FP 205


>ref|XP_010913584.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 25-like [Elaeis
           guineensis]
          Length = 971

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/125 (34%), Positives = 50/125 (40%), Gaps = 16/125 (12%)
 Frame = +2

Query: 110 FRPLGVLPVPQYSTIXXXXXXXXXXXXXXXXXXXXGASAPVSYMIPGMASGAGSATVSAP 289
           FRPLG  P P YS                      G S PVS ++PG ASGAG+ TVS  
Sbjct: 84  FRPLGAPPAPPYSI---PNPSYHGPMAQNPGIQPPGVSGPVSIVLPGAASGAGAVTVSVS 140

Query: 290 PMR---------YQPPNAPPMAYGQVTNGYMAF-------XXXXXXXXXXXXXXXYQTMV 421
           P++          QP  + PM YGQV NGYM                        Y  M+
Sbjct: 141 PVQPGGAYSVPHGQPLQSAPMPYGQVHNGYMGVPAPSPQAPAAIPPPGVPRYPAPYTAMI 200

Query: 422 RPGFP 436
            PGFP
Sbjct: 201 HPGFP 205


Top