BLASTX nr result

ID: Anemarrhena21_contig00025581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00025581
         (603 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008794668.1| PREDICTED: pentatricopeptide repeat-containi...   256   4e-66
ref|XP_010927665.1| PREDICTED: pentatricopeptide repeat-containi...   254   2e-65
ref|XP_009381889.1| PREDICTED: pentatricopeptide repeat-containi...   230   4e-58
emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]   196   7e-48
ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   196   9e-48
ref|XP_007029385.1| Tetratricopeptide-like helical, putative iso...   190   4e-46
ref|XP_010245960.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   188   1e-45
ref|XP_010228204.1| PREDICTED: pentatricopeptide repeat-containi...   188   2e-45
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   185   2e-44
gb|EEE66861.1| hypothetical protein OsJ_23658 [Oryza sativa Japo...   183   5e-44
ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group] g...   183   5e-44
ref|XP_012476888.1| PREDICTED: pentatricopeptide repeat-containi...   182   1e-43
gb|KJB26829.1| hypothetical protein B456_004G261800 [Gossypium r...   182   1e-43
ref|XP_012085751.1| PREDICTED: pentatricopeptide repeat-containi...   181   2e-43
ref|XP_002461718.1| hypothetical protein SORBIDRAFT_02g007035 [S...   178   2e-42
ref|XP_011466069.1| PREDICTED: putative pentatricopeptide repeat...   176   1e-41
ref|XP_004959110.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-41
ref|XP_007208039.1| hypothetical protein PRUPE_ppa002768mg [Prun...   176   1e-41
ref|XP_008652203.1| PREDICTED: pentatricopeptide repeat-containi...   174   3e-41
ref|XP_008218536.1| PREDICTED: putative pentatricopeptide repeat...   171   2e-40

>ref|XP_008794668.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Phoenix dactylifera]
          Length = 778

 Score =  256 bits (655), Expect = 4e-66
 Identities = 126/200 (63%), Positives = 159/200 (79%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIGAHL+ GD +GSM++F+ SPL DVSSWNTIINGQM+N LD+ AL++LY MVE   +
Sbjct: 237 NIMIGAHLQNGDIDGSMKIFKMSPLCDVSSWNTIINGQMQNRLDMNALQILYHMVEIGPK 296

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+QFT S              GRQ+H QILR GYE+DAF+RNSLIDMYCK GK+  S +I
Sbjct: 297 FNQFTVSMALVLAGKLALLELGRQLHGQILRFGYEHDAFVRNSLIDMYCKCGKIEFSSII 356

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F++SSQ +DG + +TI WSS+++G+VQNG  EEAL+LF +M  EGV VD+FTLTS+++AC
Sbjct: 357 FDSSSQCIDGLMPKTIAWSSMVSGYVQNGRGEEALELFRRMFHEGVKVDQFTLTSIAAAC 416

Query: 61  SDAGILEQGRQIHACIEKLG 2
           SDAGILEQGRQ+HAC+EKLG
Sbjct: 417 SDAGILEQGRQVHACVEKLG 436



 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASP------LQDVSSWNTIINGQMRNGLDLVALRLLYAM 440
           N +I  + + G    S  +F +S       +    +W+++++G ++NG    AL L   M
Sbjct: 338 NSLIDMYCKCGKIEFSSIIFDSSSQCIDGLMPKTIAWSSMVSGYVQNGRGEEALELFRRM 397

Query: 439 VETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKM 260
               V+  QFT +              GRQ+H  + ++G+  D F+ +++ DMY K G +
Sbjct: 398 FHEGVKVDQFTLTSIAAACSDAGILEQGRQVHACVEKLGHGFDTFLASAITDMYAKCGSL 457

Query: 259 GASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLT 80
             +   FN+            + W+SII  +  +G  ++A++LF  MLQ+ ++ +  T  
Sbjct: 458 EDACKTFNSFHS------QNVVLWTSIIGSYALHGQGKKAIQLFESMLQDKIMPNEITFV 511

Query: 79  SVSSACSDAGILEQG 35
            V SACS AG++E+G
Sbjct: 512 GVLSACSHAGLVEEG 526



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
 Frame = -3

Query: 550 ELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXX 371
           +LF     +DV +W  +I+G  RN      LRL   M+   +  ++FT +          
Sbjct: 122 KLFAEIRERDVFAWTILISGFSRNEEYETGLRLFIRMLTEGILPNRFTLASVLKCCRGSN 181

Query: 370 XXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQ----------- 224
               G+ IH  I+R G   D  ++NS++D Y KS     +  +F   ++           
Sbjct: 182 NLKMGKAIHGWIIRNGVRLDVVLQNSILDFYAKSSTFEYAERVFEMMNERDAISWNIMIG 241

Query: 223 ------FVDGS--------IAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFT 86
                  +DGS        + +   W++II G +QN +   AL++   M++ G   ++FT
Sbjct: 242 AHLQNGDIDGSMKIFKMSPLCDVSSWNTIINGQMQNRLDMNALQILYHMVEIGPKFNQFT 301

Query: 85  LTSVSSACSDAGILEQGRQIHACIEKLG 2
           ++          +LE GRQ+H  I + G
Sbjct: 302 VSMALVLAGKLALLELGRQLHGQILRFG 329



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 33/116 (28%), Positives = 61/116 (52%)
 Frame = -3

Query: 349 IHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAG 170
           +H++ +++G   D  +   L+++Y K   +  +  +F    +       +   W+ +I+G
Sbjct: 88  LHSRAIKVGLARDGQVGPGLLNLYAKCSCLDLAHKLFAEIRE------RDVFAWTILISG 141

Query: 169 FVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACIEKLG 2
           F +N   E  L+LF +ML EG++ +RFTL SV   C  +  L+ G+ IH  I + G
Sbjct: 142 FSRNEEYETGLRLFIRMLTEGILPNRFTLASVLKCCRGSNNLKMGKAIHGWIIRNG 197


>ref|XP_010927665.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Elaeis guineensis]
          Length = 778

 Score =  254 bits (649), Expect = 2e-65
 Identities = 126/200 (63%), Positives = 156/200 (78%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIGAHL+ GD +GSM++F+ SPL DVSSWNTIINGQM N LD+ AL+LLY MVE   +
Sbjct: 237 NIMIGAHLQNGDIDGSMKMFKMSPLHDVSSWNTIINGQMENRLDMNALQLLYHMVEIGPK 296

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+ FTFS              GRQ+H QI+R+G E+DAF+RNSLIDMYCK GK   S +I
Sbjct: 297 FNLFTFSMALILAGKLALLELGRQLHGQIVRLGCEHDAFVRNSLIDMYCKCGKTEVSSII 356

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           FN+SSQ VDG + +TI WSS++AG+VQNG  EEAL LF +M +EG+ VD FTLTS+++AC
Sbjct: 357 FNSSSQCVDGLMPKTISWSSMVAGYVQNGRGEEALVLFCRMFREGIKVDLFTLTSITAAC 416

Query: 61  SDAGILEQGRQIHACIEKLG 2
           SDAGILE+GRQ+HAC+EKLG
Sbjct: 417 SDAGILEEGRQVHACVEKLG 436



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASP------LQDVSSWNTIINGQMRNGLDLVALRLLYAM 440
           N +I  + + G    S  +F +S       +    SW++++ G ++NG    AL L   M
Sbjct: 338 NSLIDMYCKCGKTEVSSIIFNSSSQCVDGLMPKTISWSSMVAGYVQNGRGEEALVLFCRM 397

Query: 439 VETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKM 260
               ++   FT +              GRQ+H  + ++G+  D F+ +++ DMY K G +
Sbjct: 398 FREGIKVDLFTLTSITAACSDAGILEEGRQVHACVEKLGHGFDTFLASAITDMYAKCGSL 457

Query: 259 GASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLT 80
             +  IFN+            + W+SII  +  +G  +EA++LF  MLQ+ ++ +  T  
Sbjct: 458 EDARKIFNSFHS------RNVVLWTSIIGSYASHGQGKEAIQLFESMLQDKIMPNEITFV 511

Query: 79  SVSSACSDAGILEQG 35
            V SACS  G++E+G
Sbjct: 512 GVLSACSHGGLVEEG 526



 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 25/200 (12%)
 Frame = -3

Query: 526 QDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQI 347
           +DV +W  +I+G  RN     AL L   M+   V  + FT +              G+ I
Sbjct: 130 RDVFAWTILISGFSRNEEYETALSLFMRMLTEGVLPNCFTLASVLKCCGGFNSLQMGKGI 189

Query: 346 HNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQ-----------------FV 218
           H  ++R G   D  ++NS++D Y K G       IF   ++                  +
Sbjct: 190 HGWLMRNGVRLDVVLQNSILDFYAKCGTFEYVERIFEMMNERDTVSWNIMIGAHLQNGDI 249

Query: 217 DGS--------IAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           DGS        + +   W++II G ++N +   AL+L   M++ G   + FT +      
Sbjct: 250 DGSMKMFKMSPLHDVSSWNTIINGQMENRLDMNALQLLYHMVEIGPKFNLFTFSMALILA 309

Query: 61  SDAGILEQGRQIHACIEKLG 2
               +LE GRQ+H  I +LG
Sbjct: 310 GKLALLELGRQLHGQIVRLG 329



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/116 (29%), Positives = 60/116 (51%)
 Frame = -3

Query: 349 IHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAG 170
           +H++ +++G   D  +   L+++Y K   +  +  +F      V+    +   W+ +I+G
Sbjct: 88  LHSRAIKVGLARDGQVGAGLLNLYAKCNCLDLAHKLF------VEIRERDVFAWTILISG 141

Query: 169 FVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACIEKLG 2
           F +N   E AL LF +ML EGV+ + FTL SV   C     L+ G+ IH  + + G
Sbjct: 142 FSRNEEYETALSLFMRMLTEGVLPNCFTLASVLKCCGGFNSLQMGKGIHGWLMRNG 197


>ref|XP_009381889.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Musa acuminata subsp. malaccensis]
          Length = 776

 Score =  230 bits (586), Expect = 4e-58
 Identities = 114/200 (57%), Positives = 149/200 (74%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIGA+L  GD +GSMELFR SP QDVSSWNTII+GQM +GL  +AL++L+ MV+   +
Sbjct: 235 NIMIGAYLRQGDIDGSMELFRTSPYQDVSSWNTIISGQMEHGLHAIALQILHTMVDMGPR 294

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+QFTFS              G+Q+H QILR G+  D F+R+SLIDMY K G M AS  +
Sbjct: 295 FNQFTFSTALVIASRLTMLDLGKQLHCQILRTGHVGDVFVRSSLIDMYSKCGDMHASSFV 354

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F+ SS+  DG++ E+I +S+++AG+VQNGM E AL+L   M Q+GV VD+FTLTS ++AC
Sbjct: 355 FSGSSEHTDGTVTESISFSAMVAGYVQNGMGEGALELLRDMFQQGVKVDQFTLTSAAAAC 414

Query: 61  SDAGILEQGRQIHACIEKLG 2
           SDAGILEQG+Q+H C+EKLG
Sbjct: 415 SDAGILEQGKQVHCCVEKLG 434



 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
 Frame = -3

Query: 595 MIGAHLEIGDANGSMELFRASP------LQDVSSWNTIINGQMRNGLDLVALRLLYAMVE 434
           +I  + + GD + S  +F  S       + +  S++ ++ G ++NG+   AL LL  M +
Sbjct: 338 LIDMYSKCGDMHASSFVFSGSSEHTDGTVTESISFSAMVAGYVQNGMGEGALELLRDMFQ 397

Query: 433 TCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGA 254
             V+  QFT +              G+Q+H  + ++G+  D F+ +++ DMY K G +  
Sbjct: 398 QGVKVDQFTLTSAAAACSDAGILEQGKQVHCCVEKLGHVYDVFLSSAITDMYAKCGSLED 457

Query: 253 SLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSV 74
           +   F+NS       +   + W+SII  +  +G + EAL LF +M +E ++ +  +   V
Sbjct: 458 ARKAFDNS------RVTNVVLWTSIIGSYASHGRAAEALHLFEQMSEEKIVPNEISFVHV 511

Query: 73  SSACSDAGILEQG 35
            SAC+ AG++ +G
Sbjct: 512 LSACAHAGLVGKG 524



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
 Frame = -3

Query: 595 MIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFS 416
           ++  +   G  + + +LF     +DV +W  +I+G+ R G     L +  AM+      +
Sbjct: 105 LLSLYCRCGCVDLAGKLFDEIRERDVLAWTLLISGRARAGQYREGLEMFAAMLAEGPLPN 164

Query: 415 QFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFN 236
           +FT S              G+ +H  +LR G E D  + NS++D Y K G    +  +F 
Sbjct: 165 RFTLSCVLKCCVGCGDPGAGKSVHGWVLRNGTEFDVVLLNSILDFYAKCGAFACTKNLFR 224

Query: 235 NSSQ-----------------FVDGSI--------AETIRWSSIIAGFVQNGMSEEALKL 131
             ++                  +DGS+         +   W++II+G +++G+   AL++
Sbjct: 225 TMNEKDAISWNIMIGAYLRQGDIDGSMELFRTSPYQDVSSWNTIISGQMEHGLHAIALQI 284

Query: 130 FSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACIEKLG 2
              M+  G   ++FT ++     S   +L+ G+Q+H  I + G
Sbjct: 285 LHTMVDMGPRFNQFTFSTALVIASRLTMLDLGKQLHCQILRTG 327


>emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
          Length = 871

 Score =  196 bits (498), Expect = 7e-48
 Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIM+ ++L+IGD   S++LFR  P +D +SWNT+I+G MRNG + VAL LLY MV     
Sbjct: 168 NIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPA 227

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F++ TFS              G+QIH Q+L++G  +D F+RNSLIDMYCK G+M  + VI
Sbjct: 228 FNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVI 287

Query: 241 FN---------NSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRF 89
           F          NS +  D ++ E++ WSS+++G+VQNG  E+ALK FS M+   V VD+F
Sbjct: 288 FKHLPRESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKF 347

Query: 88  TLTSVSSACSDAGILEQGRQIHACIEKLG 2
           TLTSV SAC+ AG+LE GRQ+H  I+K+G
Sbjct: 348 TLTSVVSACASAGVLELGRQVHGYIQKIG 376



 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 51/160 (31%), Positives = 89/160 (55%)
 Frame = -3

Query: 514 SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
           SW+++++G ++NG    AL+   +M+ + V+  +FT +              GRQ+H  I
Sbjct: 313 SWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYI 372

Query: 334 LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNG 155
            +IG+  D F+ +S+IDMY K G +  + +IFN +           + W+S+I+G   +G
Sbjct: 373 QKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKD------RNVVLWTSMISGCALHG 426

Query: 154 MSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
              EA++LF  M+ EG+  +  +   V +ACS AG+LE+G
Sbjct: 427 QGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 466



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
 Frame = -3

Query: 502 IINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXG-RQIHNQILRI 326
           +I+G  R GL    L L   M +  V  +QFT S                + IH  ILR 
Sbjct: 68  LISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRN 127

Query: 325 GYENDAFIRNSLIDMYCKSGKMGASLVIFN-------------NSSQFVDGSIAETI--- 194
           G + DA + NS++D Y K    G +  +F               SS    G + +++   
Sbjct: 128 GVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLF 187

Query: 193 ---------RWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILE 41
                     W+++I G ++NG    AL+L  KM+  G   ++ T +      S   +L 
Sbjct: 188 RQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLG 247

Query: 40  QGRQIHACIEKLG 2
            G+QIH  + K+G
Sbjct: 248 LGKQIHTQVLKVG 260


>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  196 bits (497), Expect = 9e-48
 Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
 Frame = -3

Query: 601  NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
            NIM+ ++L+IGD   S++LFR  P +D +SWNT+I+G MRNG + VAL LLY MV     
Sbjct: 458  NIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPA 517

Query: 421  FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
            F++ TFS              G+QIH Q+L++G  +D F+RNSLIDMYCK G+M  + VI
Sbjct: 518  FNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVI 577

Query: 241  FN---------NSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRF 89
            F          NS +  D ++ E++ WSS+++G+VQNG  E+ALK FS M+   V VD+F
Sbjct: 578  FKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKF 637

Query: 88   TLTSVSSACSDAGILEQGRQIHACIEKLG 2
            TLTSV SAC+ AG+LE GRQ+H  I+K+G
Sbjct: 638  TLTSVVSACASAGVLELGRQVHGYIQKIG 666



 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 51/160 (31%), Positives = 88/160 (55%)
 Frame = -3

Query: 514  SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
            SW+++++G ++NG    AL+    M+ + V+  +FT +              GRQ+H  I
Sbjct: 603  SWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYI 662

Query: 334  LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNG 155
             +IG+  D F+ +S+IDMY K G +  + +IFN +           + W+S+I+G   +G
Sbjct: 663  QKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKD------RNVVLWTSMISGCALHG 716

Query: 154  MSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
               EA++LF  M+ EG+  +  +   V +ACS AG+LE+G
Sbjct: 717  QGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 756



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 26/226 (11%)
 Frame = -3

Query: 601  NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
            N ++  + +  +   + ++F   P  DV SW  +I+G  R GL    L L   M +  V 
Sbjct: 325  NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384

Query: 421  FSQFTFS-XXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLV 245
             +QFT S               G+ IH  ILR G + DA + NS++D Y K    G +  
Sbjct: 385  PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444

Query: 244  IFN-------------NSSQFVDGSIAETI------------RWSSIIAGFVQNGMSEEA 140
            +F               SS    G + +++             W+++I G ++NG    A
Sbjct: 445  LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504

Query: 139  LKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACIEKLG 2
            L+L  KM+  G   ++ T +      S   +L  G+QIH  + K+G
Sbjct: 505  LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG 550


>ref|XP_007029385.1| Tetratricopeptide-like helical, putative isoform 1 [Theobroma
           cacao] gi|590638415|ref|XP_007029386.1|
           Tetratricopeptide-like helical, putative isoform 1
           [Theobroma cacao] gi|508717990|gb|EOY09887.1|
           Tetratricopeptide-like helical, putative isoform 1
           [Theobroma cacao] gi|508717991|gb|EOY09888.1|
           Tetratricopeptide-like helical, putative isoform 1
           [Theobroma cacao]
          Length = 752

 Score =  190 bits (483), Expect = 4e-46
 Identities = 98/203 (48%), Positives = 135/203 (66%), Gaps = 3/203 (1%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIGAHL IGD   ++++FR    +DV+SWNTII+G MRNG   +AL LLY MV+    
Sbjct: 208 NIMIGAHLNIGDVEKAVDMFRRLSSKDVASWNTIIDGLMRNGPKRMALELLYEMVKNGTV 267

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
             + TFS              G+QIH ++LR+G+  D FIR SLIDMYCK GKM  +L +
Sbjct: 268 LDEVTFSISLVLVSSFMDIELGKQIHGRVLRLGFHVDGFIRASLIDMYCKCGKMEMALEV 327

Query: 241 F---NNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVS 71
           F   N+     + SI E + WSSI++GFV NG  E+A K F+ M+ + + VDRFT+TS+ 
Sbjct: 328 FKRMNSDFGRKENSIEEIVSWSSIVSGFVLNGEIEDAFKTFTSMISKEIEVDRFTVTSIV 387

Query: 70  SACSDAGILEQGRQIHACIEKLG 2
           SAC+++G+LE G+Q+HA I+K+G
Sbjct: 388 SACANSGVLELGQQVHALIQKIG 410



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 51/196 (26%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
 Frame = -3

Query: 595 MIGAHLEIGDANGSMELFRA---------SPLQDVSSWNTIINGQMRNGLDLVALRLLYA 443
           +I  + + G    ++E+F+          + ++++ SW++I++G + NG    A +   +
Sbjct: 311 LIDMYCKCGKMEMALEVFKRMNSDFGRKENSIEEIVSWSSIVSGFVLNGEIEDAFKTFTS 370

Query: 442 MVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGK 263
           M+   ++  +FT +              G+Q+H  I +IG+  DA + +SLIDMY K G 
Sbjct: 371 MISKEIEVDRFTVTSIVSACANSGVLELGQQVHALIQKIGHRVDAHLGSSLIDMYSKCGS 430

Query: 262 MGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTL 83
           +  + ++F  ++          + W+S+I+    +G   EA++LF  M+ EG+  +  T 
Sbjct: 431 LDDAQMVFKQTND------KNVVLWTSMISCCALHGQGREAVRLFEFMMSEGIKPNVVTF 484

Query: 82  TSVSSACSDAGILEQG 35
             V +ACS AG++E+G
Sbjct: 485 IGVLTACSHAGLIEEG 500


>ref|XP_010245960.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g04780-like [Nelumbo nucifera]
          Length = 1019

 Score =  188 bits (478), Expect = 1e-45
 Identities = 105/210 (50%), Positives = 135/210 (64%), Gaps = 10/210 (4%)
 Frame = -3

Query: 601  NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
            NIMI  +L+IG+   +MELFR  PL+ VSSWNTII GQMRNG    AL LL  MVE    
Sbjct: 468  NIMIDGYLQIGNTEKAMELFRRLPLKYVSSWNTIIVGQMRNGYGRKALELLCQMVEIGPD 527

Query: 421  FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
            F++ T+S              GRQIH ++LR+  + D FI +SLIDMYCK GK+  + ++
Sbjct: 528  FNKVTYSTALALAASLAMLEVGRQIHGKLLRVVLDYDEFIMSSLIDMYCKCGKLDKAALV 587

Query: 241  F----------NNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDR 92
            F           NS    D  +A  I WSS+I+G +QNG  EEA+KLF  M+ EG+ VD+
Sbjct: 588  FEKMPHDLANMQNSKISSDRIMANVISWSSMISGCIQNGSYEEAIKLFQMMIHEGLDVDQ 647

Query: 91   FTLTSVSSACSDAGILEQGRQIHACIEKLG 2
            FTLTS++SAC++AGIL QG+QIHA IEK G
Sbjct: 648  FTLTSIASACANAGILYQGQQIHAYIEKTG 677



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 48/164 (29%), Positives = 87/164 (53%)
 Frame = -3

Query: 529  LQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQ 350
            + +V SW+++I+G ++NG    A++L   M+   +   QFT +              G+Q
Sbjct: 609  MANVISWSSMISGCIQNGSYEEAIKLFQMMIHEGLDVDQFTLTSIASACANAGILYQGQQ 668

Query: 349  IHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAG 170
            IH  I + G++ D F+ +++IDMY K G +  +  IF  ++          + W+S+I+ 
Sbjct: 669  IHAYIEKTGHKLDVFLGSAIIDMYAKCGNLDDAHSIFFQTNGH------NVVLWTSMISA 722

Query: 169  FVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQ 38
               +G   EA+ LF +ML+EG+  +  +   V S CS AG++E+
Sbjct: 723  CSLHGQGREAVHLFEQMLKEGISPNEVSFVGVLSGCSHAGLVEE 766



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
 Frame = -3

Query: 580 LEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFS 401
           L +G A    +LF   P +DV +W  +I G  R G     L L   M    ++ + F+ S
Sbjct: 346 LNLGSAR---KLFDEIPNRDVRTWTILIAGFARLGPAGAGLVLFTEMQTEGIRPNHFSLS 402

Query: 400 XXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQ- 224
                         G+ +H  ILR G   D  + NS+ID+Y K  K+  +  IF + +  
Sbjct: 403 SVLKCCSSLNNLRCGKGVHGWILRHGVVLDVVLDNSMIDIYVKCAKVDYAGRIFESVTTR 462

Query: 223 -------FVDG--SIAETIR---------------WSSIIAGFVQNGMSEEALKLFSKML 116
                   +DG   I  T +               W++II G ++NG   +AL+L  +M+
Sbjct: 463 DTVSWNIMIDGYLQIGNTEKAMELFRRLPLKYVSSWNTIIVGQMRNGYGRKALELLCQMV 522

Query: 115 QEGVIVDRFTLTSVSSACSDAGILEQGRQIH 23
           + G   ++ T ++  +  +   +LE GRQIH
Sbjct: 523 EIGPDFNKVTYSTALALAASLAMLEVGRQIH 553


>ref|XP_010228204.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
           gi|721619282|ref|XP_010228205.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
           gi|721619285|ref|XP_010228206.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
           gi|721619288|ref|XP_010228207.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 721

 Score =  188 bits (477), Expect = 2e-45
 Identities = 95/200 (47%), Positives = 130/200 (65%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NI+I A ++ GD  GSM+LF  SPL+D SSWNT+I+G MRNG    AL  LY M    V 
Sbjct: 183 NIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMARARVV 242

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+ +T+S              GRQ+H ++L    + DAF+R+SL+DMYCK G M  +++I
Sbjct: 243 FNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRSSLMDMYCKCGSMETAVLI 302

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F++ SQ           WS+++AG+VQNG  EEA + F  ML+EGV   +FTLTS  +AC
Sbjct: 303 FDSWSQLTGDM---NFAWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAAC 359

Query: 61  SDAGILEQGRQIHACIEKLG 2
           ++AG++EQGRQ+H CIEKLG
Sbjct: 360 ANAGMVEQGRQVHGCIEKLG 379



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
 Frame = -3

Query: 514 SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
           +W+ ++ G ++NG +  A     +M+   V   QFT +              GRQ+H  I
Sbjct: 316 AWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAACANAGMVEQGRQVHGCI 375

Query: 334 LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIR-WSSIIAGFVQN 158
            ++G+  DA + +++IDMY K G +G +  IF       D + A+ +  W+S++  +  +
Sbjct: 376 EKLGHSFDAPLASAIIDMYAKCGNLGDACRIF-------DRACAKNVALWTSMLCSYASH 428

Query: 157 GMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
           G    A++LF++M  E +  +  TL  V SACS   ++ +G
Sbjct: 429 GKGRMAIELFNRMTAEKITPNEITLVGVLSACSHGRLVNEG 469


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  185 bits (469), Expect = 2e-44
 Identities = 97/202 (48%), Positives = 135/202 (66%), Gaps = 2/202 (0%)
 Frame = -3

Query: 601  NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
            NIMIG +L +GD   S+ELF++   ++++SWNTII+G M+NG + +AL LLY MVE+ + 
Sbjct: 452  NIMIGGYLRMGDVESSLELFQSLYFKNIASWNTIIDGLMKNGFETIALELLYKMVESGLG 511

Query: 421  FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
            F+  TFS              G+QIH +ILR+   ++ FIRNSL+DMYCK GKM  +  +
Sbjct: 512  FNSVTFSVALNLVSCLVNLELGKQIHGRILRLIIHDNGFIRNSLLDMYCKCGKMEEASRM 571

Query: 241  FNNSSQFV--DGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSS 68
            F N    +  D  + E + WSS+I+G+V+NG  E AL+ F  M+ E V+VD+FTLTSV S
Sbjct: 572  FRNVPVEISCDDPLGEIVSWSSMISGYVRNGEYEYALRTFISMVHEQVLVDKFTLTSVVS 631

Query: 67   ACSDAGILEQGRQIHACIEKLG 2
            AC++ G LE GRQIHA I K+G
Sbjct: 632  ACANTGCLELGRQIHAHILKIG 653



 Score =  108 bits (270), Expect = 2e-21
 Identities = 63/186 (33%), Positives = 100/186 (53%)
 Frame = -3

Query: 562  NGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXX 383
            N  +E+    PL ++ SW+++I+G +RNG    ALR   +MV   V   +FT +      
Sbjct: 574  NVPVEISCDDPLGEIVSWSSMISGYVRNGEYEYALRTFISMVHEQVLVDKFTLTSVVSAC 633

Query: 382  XXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIA 203
                    GRQIH  IL+IG++ DA + +SLIDMY K G +  + +IF  +         
Sbjct: 634  ANTGCLELGRQIHAHILKIGHKVDAHLGSSLIDMYAKCGSLNDAQMIFKENDD------P 687

Query: 202  ETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIH 23
              + W+S+I G   +G   EA+++F  M+ EG+  +  T  SV +AC+ AG+LE+G +  
Sbjct: 688  NVVLWTSMIFGCALHGQGREAVRVFKCMMNEGITPNEITFISVLTACNHAGLLEEGCKYF 747

Query: 22   ACIEKL 5
              + KL
Sbjct: 748  ELMPKL 753



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = -3

Query: 349 IHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIR-WSSIIA 173
           +H+ +++IG  ++  I N L+D+Y K+ +        +++ +  D  +   +R W+ +I+
Sbjct: 302 LHSNVIKIGSFHNLGITNHLLDLYAKNSQN------LSHAHKLFDEILCRDVRTWTILIS 355

Query: 172 GFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACI 14
           GF Q    +    LF +M +EGV  ++FTL+SV   CS    +  G+ IH  I
Sbjct: 356 GFAQTRNFKMVSGLFRRMQKEGVCPNQFTLSSVLKCCSSICEIRNGKGIHGWI 408


>gb|EEE66861.1| hypothetical protein OsJ_23658 [Oryza sativa Japonica Group]
          Length = 728

 Score =  183 bits (465), Expect = 5e-44
 Identities = 95/199 (47%), Positives = 131/199 (65%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NI IGA ++ GD  GSM+LF  SPL+D +SWNTII+G MR+G    AL  L  M +  V 
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+ +T+S              GRQ+H ++L    E DAF+R+SL+DMYCK G + A+  +
Sbjct: 242 FNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASV 301

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F++ S            WS+++AG+VQNG  EEAL LF +ML+EGV  DRFTLTSV++AC
Sbjct: 302 FDHWSPLTRDM---NFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAAC 358

Query: 61  SDAGILEQGRQIHACIEKL 5
           ++ G++EQGRQ+H C+EKL
Sbjct: 359 ANVGMVEQGRQVHGCVEKL 377



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
 Frame = -3

Query: 514 SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
           +W+T++ G ++NG +  AL L   M+   V   +FT +              GRQ+H  +
Sbjct: 315 AWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCV 374

Query: 334 LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIR-WSSIIAGFVQN 158
            ++ Y+ DA + ++++DMY K G +  +  IF       D +  + I  W+S++  +  +
Sbjct: 375 EKLWYKLDAPLASAIVDMYAKCGNLEDARSIF-------DRACTKNIAVWTSMLCSYASH 427

Query: 157 GMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
           G    A++LF +M  E +  +  TL  V SACS  G++ +G
Sbjct: 428 GQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468


>ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
           gi|33146689|dbj|BAC80084.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|50510012|dbj|BAD30625.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|113610797|dbj|BAF21175.1|
           Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  183 bits (465), Expect = 5e-44
 Identities = 95/199 (47%), Positives = 131/199 (65%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NI IGA ++ GD  GSM+LF  SPL+D +SWNTII+G MR+G    AL  L  M +  V 
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+ +T+S              GRQ+H ++L    E DAF+R+SL+DMYCK G + A+  +
Sbjct: 242 FNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASV 301

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F++ S            WS+++AG+VQNG  EEAL LF +ML+EGV  DRFTLTSV++AC
Sbjct: 302 FDHWSPLTRDM---NFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAAC 358

Query: 61  SDAGILEQGRQIHACIEKL 5
           ++ G++EQGRQ+H C+EKL
Sbjct: 359 ANVGMVEQGRQVHGCVEKL 377



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
 Frame = -3

Query: 514 SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
           +W+T++ G ++NG +  AL L   M+   V   +FT +              GRQ+H  +
Sbjct: 315 AWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCV 374

Query: 334 LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIR-WSSIIAGFVQN 158
            ++ Y+ DA + ++++DMY K G +  +  IF       D +  + I  W+S++  +  +
Sbjct: 375 EKLWYKLDAPLASAIVDMYAKCGNLEDARSIF-------DRACTKNIAVWTSMLCSYASH 427

Query: 157 GMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
           G    A++LF +M  E +  +  TL  V SACS  G++ +G
Sbjct: 428 GQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468


>ref|XP_012476888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Gossypium raimondii]
          Length = 745

 Score =  182 bits (462), Expect = 1e-43
 Identities = 92/203 (45%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIGA+L+ G+ + +++LFR   L+ VS WNTIING MRNG + +AL+LLY MV+    
Sbjct: 199 NIMIGAYLDTGNVDKAVDLFRRQGLKGVSIWNTIINGLMRNGFERIALKLLYEMVKDGTL 258

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F++ TFS              G+QIH ++L  G   D F+RNSLIDMYCK G+M  +L +
Sbjct: 259 FNEVTFSIALVLVSLLKDLELGKQIHGRVLLSGIHVDGFLRNSLIDMYCKCGEMKMALKV 318

Query: 241 FNNSSQFV---DGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVS 71
           F     +    + SI E I WSSII+G V NG  E+A K F+ M+++ + +D F++TS+ 
Sbjct: 319 FKKMDTYFGRNENSIEEVISWSSIISGLVLNGEFEDAFKTFTSMVRKDIDIDAFSITSIV 378

Query: 70  SACSDAGILEQGRQIHACIEKLG 2
           SAC+  G+LE GRQ+H  ++K+G
Sbjct: 379 SACASFGVLELGRQVHGLVQKMG 401



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRA---------SPLQDVSSWNTIINGQMRNGLDLVALRLL 449
           N +I  + + G+   ++++F+          + +++V SW++II+G + NG    A +  
Sbjct: 300 NSLIDMYCKCGEMKMALKVFKKMDTYFGRNENSIEEVISWSSIISGLVLNGEFEDAFKTF 359

Query: 448 YAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKS 269
            +MV   +    F+ +              GRQ+H  + ++G++ DA + +SLIDMY K 
Sbjct: 360 TSMVRKDIDIDAFSITSIVSACASFGVLELGRQVHGLVQKMGHKLDAHLGSSLIDMYAKC 419

Query: 268 GKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRF 89
           G +  +  IF  ++          + W+S++  +  +G   EA++LF   +  G++ +  
Sbjct: 420 GNLDDAKRIFKQTNDM------NVVLWTSMVYSYALHGRGREAVQLFEFSMSHGLLPNEV 473

Query: 88  TLTSVSSACSDAGILEQG 35
           T   V +ACS AG++E+G
Sbjct: 474 TFIGVLTACSHAGLVEEG 491



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           N ++  +++  + N + +LF   P +DV +W  +++   R G +  AL L   M    ++
Sbjct: 67  NHLLNVYVKSKNLNHACKLFDEMPHRDVRTWTILVSTFARVGSNGAALELFKNMQNEGIK 126

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
            +QFT S              G+ +H  ILR G   D  + N+L   Y K    G++  +
Sbjct: 127 PNQFTLSSVLKCCSSLSELKIGKGVHGWILRNGVVFDVILENALFCFYVKCEDFGSAKWL 186

Query: 241 FNNSSQ------------FVD-GSIAETIR------------WSSIIAGFVQNGMSEEAL 137
           F +  +            ++D G++ + +             W++II G ++NG    AL
Sbjct: 187 FESMEEKNSVTWNIMIGAYLDTGNVDKAVDLFRRQGLKGVSIWNTIINGLMRNGFERIAL 246

Query: 136 KLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIH 23
           KL  +M+++G + +  T +      S    LE G+QIH
Sbjct: 247 KLLYEMVKDGTLFNEVTFSIALVLVSLLKDLELGKQIH 284


>gb|KJB26829.1| hypothetical protein B456_004G261800 [Gossypium raimondii]
          Length = 636

 Score =  182 bits (462), Expect = 1e-43
 Identities = 92/203 (45%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIGA+L+ G+ + +++LFR   L+ VS WNTIING MRNG + +AL+LLY MV+    
Sbjct: 199 NIMIGAYLDTGNVDKAVDLFRRQGLKGVSIWNTIINGLMRNGFERIALKLLYEMVKDGTL 258

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F++ TFS              G+QIH ++L  G   D F+RNSLIDMYCK G+M  +L +
Sbjct: 259 FNEVTFSIALVLVSLLKDLELGKQIHGRVLLSGIHVDGFLRNSLIDMYCKCGEMKMALKV 318

Query: 241 FNNSSQFV---DGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVS 71
           F     +    + SI E I WSSII+G V NG  E+A K F+ M+++ + +D F++TS+ 
Sbjct: 319 FKKMDTYFGRNENSIEEVISWSSIISGLVLNGEFEDAFKTFTSMVRKDIDIDAFSITSIV 378

Query: 70  SACSDAGILEQGRQIHACIEKLG 2
           SAC+  G+LE GRQ+H  ++K+G
Sbjct: 379 SACASFGVLELGRQVHGLVQKMG 401



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRA---------SPLQDVSSWNTIINGQMRNGLDLVALRLL 449
           N +I  + + G+   ++++F+          + +++V SW++II+G + NG    A +  
Sbjct: 300 NSLIDMYCKCGEMKMALKVFKKMDTYFGRNENSIEEVISWSSIISGLVLNGEFEDAFKTF 359

Query: 448 YAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKS 269
            +MV   +    F+ +              GRQ+H  + ++G++ DA + +SLIDMY K 
Sbjct: 360 TSMVRKDIDIDAFSITSIVSACASFGVLELGRQVHGLVQKMGHKLDAHLGSSLIDMYAKC 419

Query: 268 GKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRF 89
           G +  +  IF  ++          + W+S++  +  +G   EA++LF   +  G++ +  
Sbjct: 420 GNLDDAKRIFKQTNDM------NVVLWTSMVYSYALHGRGREAVQLFEFSMSHGLLPNEV 473

Query: 88  TLTSVSSACSDAGILEQG 35
           T   V +ACS AG++E+G
Sbjct: 474 TFIGVLTACSHAGLVEEG 491



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           N ++  +++  + N + +LF   P +DV +W  +++   R G +  AL L   M    ++
Sbjct: 67  NHLLNVYVKSKNLNHACKLFDEMPHRDVRTWTILVSTFARVGSNGAALELFKNMQNEGIK 126

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
            +QFT S              G+ +H  ILR G   D  + N+L   Y K    G++  +
Sbjct: 127 PNQFTLSSVLKCCSSLSELKIGKGVHGWILRNGVVFDVILENALFCFYVKCEDFGSAKWL 186

Query: 241 FNNSSQ------------FVD-GSIAETIR------------WSSIIAGFVQNGMSEEAL 137
           F +  +            ++D G++ + +             W++II G ++NG    AL
Sbjct: 187 FESMEEKNSVTWNIMIGAYLDTGNVDKAVDLFRRQGLKGVSIWNTIINGLMRNGFERIAL 246

Query: 136 KLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIH 23
           KL  +M+++G + +  T +      S    LE G+QIH
Sbjct: 247 KLLYEMVKDGTLFNEVTFSIALVLVSLLKDLELGKQIH 284


>ref|XP_012085751.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Jatropha curcas]
           gi|802724504|ref|XP_012085752.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Jatropha curcas]
           gi|643714198|gb|KDP26863.1| hypothetical protein
           JCGZ_18021 [Jatropha curcas]
          Length = 756

 Score =  181 bits (460), Expect = 2e-43
 Identities = 92/202 (45%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIMIG +L IG+  G++ LF++   +DV+SWN I++G MRNG ++ AL  +Y MVE+   
Sbjct: 213 NIMIGGYLHIGNVEGALGLFQSLYFKDVTSWNNIVDGLMRNGCEVKALGFIYKMVESGPV 272

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F++ TFS              G+QIH ++LR+   ++ FIRNSL+DMYCK GKM  + +I
Sbjct: 273 FNEVTFSIALNLASCLSLLGLGKQIHGRVLRLVLHSNGFIRNSLLDMYCKCGKMDEASII 332

Query: 241 FNNSSQFV--DGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSS 68
           F      +  D S+A+ + WSS+++G+V+NG  E AL+ F  M+ E  +VD+FTLTS+ S
Sbjct: 333 FRKMPVEISCDDSLADIVSWSSMVSGYVRNGNYELALQTFRFMVNEYFVVDKFTLTSIIS 392

Query: 67  ACSDAGILEQGRQIHACIEKLG 2
           AC+++G+LE GRQIHA I+K+G
Sbjct: 393 ACANSGMLELGRQIHAHIQKVG 414



 Score =  103 bits (257), Expect = 6e-20
 Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQ--------DVSSWNTIINGQMRNGLDLVALRLLY 446
           N ++  + + G  + +  +FR  P++        D+ SW+++++G +RNG   +AL+   
Sbjct: 314 NSLLDMYCKCGKMDEASIIFRKMPVEISCDDSLADIVSWSSMVSGYVRNGNYELALQTFR 373

Query: 445 AMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSG 266
            MV       +FT +              GRQIH  I ++G++ DA + +SL+DMY K G
Sbjct: 374 FMVNEYFVVDKFTLTSIISACANSGMLELGRQIHAHIQKVGHKIDAHLGSSLVDMYAKCG 433

Query: 265 KMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFT 86
            +  ++ IF  ++          + W+S+I+G   +G + EA++LF  M+ EG+  +  T
Sbjct: 434 SLSDAMKIFKQNNNL------NVVLWTSMISGLALHGQAREAVQLFECMMNEGITPNEIT 487

Query: 85  LTSVSSACSDAGILEQGRQIHACIEK 8
              + +AC+ AG+LE+G +    ++K
Sbjct: 488 FIGILTACNHAGLLEEGCKYFELMQK 513


>ref|XP_002461718.1| hypothetical protein SORBIDRAFT_02g007035 [Sorghum bicolor]
           gi|241925095|gb|EER98239.1| hypothetical protein
           SORBIDRAFT_02g007035, partial [Sorghum bicolor]
          Length = 551

 Score =  178 bits (452), Expect = 2e-42
 Identities = 96/200 (48%), Positives = 130/200 (65%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NI+I A L+ GD  G+M LF  S L+DVSSWNTII+G MR+G    AL  L  MV   V 
Sbjct: 184 NIVIRACLQDGDFVGAMRLFDESSLRDVSSWNTIISGLMRHGRTTEALDCLQQMVRAGVV 243

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           FS +T+S              GRQ+H +++    E D F+R SLIDMYCK G+M  +L I
Sbjct: 244 FSNYTYSMAFSLAGLLLLLDLGRQLHGRVMVAVLEEDVFVRCSLIDMYCKCGEMETALSI 303

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F+  S+F D        WS+++AG++QNG  EEAL+ F +ML+EGV   +F LTSV++AC
Sbjct: 304 FDRWSEFTDDI---QFAWSAMVAGYIQNGREEEALEFFRRMLREGVPAGQFILTSVAAAC 360

Query: 61  SDAGILEQGRQIHACIEKLG 2
           ++AG++EQGRQ+H  +EKLG
Sbjct: 361 ANAGMVEQGRQVHGFVEKLG 380



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
 Frame = -3

Query: 595 MIGAHLEIGDANGSMELF-RASPLQD--VSSWNTIINGQMRNGLDLVALRLLYAMVETCV 425
           +I  + + G+   ++ +F R S   D    +W+ ++ G ++NG +  AL     M+   V
Sbjct: 287 LIDMYCKCGEMETALSIFDRWSEFTDDIQFAWSAMVAGYIQNGREEEALEFFRRMLREGV 346

Query: 424 QFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLV 245
              QF  +              GRQ+H  + ++G+  DA + ++++DMY K G +  +  
Sbjct: 347 PAGQFILTSVAAACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKCGSLEDACR 406

Query: 244 IFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSA 65
           IF ++    D ++A    W++++  +  +G    AL+ FS+M  E +  +  TL SV SA
Sbjct: 407 IFESAQ---DKNVA---LWTTMLCSYATHGKGRMALETFSRMKAEKITPNEITLVSVLSA 460

Query: 64  CSDAGILEQGRQIHACIEK 8
           CS +G++ +G      ++K
Sbjct: 461 CSHSGLVSEGYHYFNLMQK 479



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
 Frame = -3

Query: 547 LFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETC--VQFSQFTFSXXXXXXXXX 374
           +F  +P +++ +W +II+G  R G     +R    M++ C     + F  +         
Sbjct: 68  VFDRTPTRNLPAWTSIISGCAREGRHADGMRAFTEMLDGCGVTAPNAFVLAGVLRCCAGL 127

Query: 373 XXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQ---------- 224
                GR+IH  ILR G   D  + N+++DMY K G  G +  +F   +Q          
Sbjct: 128 GDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRVFGAMTQKDATSWNIVI 187

Query: 223 ---------------FVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRF 89
                          F + S+ +   W++II+G +++G + EAL    +M++ GV+   +
Sbjct: 188 RACLQDGDFVGAMRLFDESSLRDVSSWNTIISGLMRHGRTTEALDCLQQMVRAGVVFSNY 247

Query: 88  TLTSVSSACSDAGILEQGRQIH 23
           T +   S      +L+ GRQ+H
Sbjct: 248 TYSMAFSLAGLLLLLDLGRQLH 269


>ref|XP_011466069.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Fragaria vesca subsp. vesca]
          Length = 736

 Score =  176 bits (445), Expect = 1e-41
 Identities = 95/206 (46%), Positives = 131/206 (63%), Gaps = 6/206 (2%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NIM+GA++ IGD   ++E+FR  P +DV+SWNTI+ G M+NG +  AL LLY MVE  V 
Sbjct: 189 NIMMGAYMHIGDMEKALEMFRRVPCKDVASWNTIVYGLMQNGDERCALELLYEMVENGVS 248

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F   TFS              GRQIH  ++R+G END F+R+SLIDMYCK G+M  + +I
Sbjct: 249 FQDVTFSVALGLASSLHVVEIGRQIHGCLVRLGIENDGFLRSSLIDMYCKCGRMDKASLI 308

Query: 241 FNNSS-----QFVDGSI-AETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLT 80
           F  +      +F    +  E I WSS+++G+V+NG  E AL  F  ML+E  +VDRF++T
Sbjct: 309 FKRTPLRAKYKFTSDEVKTEIISWSSMVSGYVRNGEHEYALITFRSMLREQFMVDRFSVT 368

Query: 79  SVSSACSDAGILEQGRQIHACIEKLG 2
           SV SAC++ G L  G+ IHA  +K+G
Sbjct: 369 SVVSACANLGSLLLGQSIHALGQKVG 394



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
 Frame = -3

Query: 595 MIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFS 416
           ++  +++  + + + +LF   P +DV SW  +I+G  R       L L   M    V  +
Sbjct: 59  VVSLYMKSKNLDYACKLFDEMPERDVQSWTILISGFARTRACRFVLELFKEMQVERVCPN 118

Query: 415 QFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFN 236
           QFT S              G+ +H  ILR G E D  + NSL+D+Y K G +  +  +F 
Sbjct: 119 QFTLSSVLKSCSSLCDFRMGKGVHGWILRNGIEVDVVLENSLLDVYVKCGALDYAERLFE 178

Query: 235 NSSQ-------------------------FVDGSIAETIRWSSIIAGFVQNGMSEEALKL 131
              +                         F      +   W++I+ G +QNG    AL+L
Sbjct: 179 TIKERDTVTWNIMMGAYMHIGDMEKALEMFRRVPCKDVASWNTIVYGLMQNGDERCALEL 238

Query: 130 FSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACIEKLG 2
             +M++ GV     T +      S   ++E GRQIH C+ +LG
Sbjct: 239 LYEMVENGVSFQDVTFSVALGLASSLHVVEIGRQIHGCLVRLG 281



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 48/209 (22%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
 Frame = -3

Query: 595 MIGAHLEIGDANGSMELFRASPLQ------------DVSSWNTIINGQMRNGLDLVALRL 452
           +I  + + G  + +  +F+ +PL+            ++ SW+++++G +RNG    AL  
Sbjct: 292 LIDMYCKCGRMDKASLIFKRTPLRAKYKFTSDEVKTEIISWSSMVSGYVRNGEHEYALIT 351

Query: 451 LYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCK 272
             +M+       +F+ +              G+ IH    ++GY  D  + +  IDMY K
Sbjct: 352 FRSMLREQFMVDRFSVTSVVSACANLGSLLLGQSIHALGQKVGYILDVHLSSCYIDMYAK 411

Query: 271 SGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDR 92
            G +  + +IF  +           + W+S+I+    +G  +EA +LF  M++EG+  + 
Sbjct: 412 CGSLTDAWMIFTPTHD------PNVVLWTSMISACALHGQGKEAAQLFELMIREGMKPNE 465

Query: 91  FTLTSVSSACSDAGILEQGRQIHACIEKL 5
            T   + +ACS AG++E+G +  + ++++
Sbjct: 466 VTFVGLLNACSHAGLIEEGSKYFSLMKEV 494


>ref|XP_004959110.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Setaria italica]
           gi|835930293|ref|XP_012699290.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Setaria italica]
           gi|835930297|ref|XP_012699291.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Setaria italica]
          Length = 727

 Score =  176 bits (445), Expect = 1e-41
 Identities = 94/200 (47%), Positives = 132/200 (66%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NI++ A L+ GD   +M LF  SP QD SSWNTII+G MRNG    AL  L  MV   V 
Sbjct: 190 NIVLSACLQGGDVLAAMRLFDESPSQDASSWNTIISGLMRNGCAAEALDRLKQMVRAGVV 249

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F+ +T+S              GRQ+H +++    E+DAF+  SL+DMYCK G+M A+L+I
Sbjct: 250 FNHYTYSTAFALAGMLSLLDLGRQLHGRLVMAALEDDAFVCCSLMDMYCKCGEMEAALLI 309

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F+  S F+ G +     WS+++AG+VQNG  EEA++ F +ML+EGV  ++F LTSV++AC
Sbjct: 310 FDCWSWFI-GDV--KFAWSTMVAGYVQNGREEEAIEFFRRMLREGVPAEQFILTSVAAAC 366

Query: 61  SDAGILEQGRQIHACIEKLG 2
            +AG++EQGRQ+H  +EKLG
Sbjct: 367 GNAGMVEQGRQVHGFVEKLG 386



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 42/160 (26%), Positives = 84/160 (52%)
 Frame = -3

Query: 514 SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
           +W+T++ G ++NG +  A+     M+   V   QF  +              GRQ+H  +
Sbjct: 323 AWSTMVAGYVQNGREEEAIEFFRRMLREGVPAEQFILTSVAAACGNAGMVEQGRQVHGFV 382

Query: 334 LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNG 155
            ++G+  DA + +++I MY K G +  +L IF +S+Q  + ++     W++++  +   G
Sbjct: 383 EKLGHRFDAPLASAMIGMYSKCGSLEDALRIF-HSAQAKNVAV-----WTTMLCSYASYG 436

Query: 154 MSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
               A+++F++M  E +  +  TL +V SACS +G++  G
Sbjct: 437 QGRMAIEIFNRMKAETITPNEVTLVAVLSACSHSGLVSDG 476


>ref|XP_007208039.1| hypothetical protein PRUPE_ppa002768mg [Prunus persica]
           gi|462403681|gb|EMJ09238.1| hypothetical protein
           PRUPE_ppa002768mg [Prunus persica]
          Length = 635

 Score =  176 bits (445), Expect = 1e-41
 Identities = 95/206 (46%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           N+M+GA++ IGD   +++LFR  P +DV+SWNTII G MRNG +  AL LL  MVE    
Sbjct: 88  NVMMGAYMYIGDMEKALDLFRRLPFKDVTSWNTIIYGLMRNGHETYALELLSEMVEIGPP 147

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F + TFS              GRQIH ++LR G +ND F+R SLIDMY K GKM  + +I
Sbjct: 148 FDKVTFSVALVLASSLYVLELGRQIHGRVLRFGIQNDGFLRTSLIDMYSKCGKMEKASLI 207

Query: 241 F------NNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLT 80
           F       NS      +  E + WSS+++G+V+NG  E AL  F  M++E ++VDRF+LT
Sbjct: 208 FKTLPLRTNSKFTCHETKTEVVSWSSMVSGYVRNGEYEYALLTFCSMVREQIMVDRFSLT 267

Query: 79  SVSSACSDAGILEQGRQIHACIEKLG 2
           S+ SAC++ GIL  G+ IHA I+K+G
Sbjct: 268 SIVSACANVGILLLGQHIHAHIQKIG 293



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 54/163 (33%), Positives = 89/163 (54%)
 Frame = -3

Query: 523 DVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIH 344
           +V SW+++++G +RNG    AL    +MV   +   +F+ +              G+ IH
Sbjct: 227 EVVSWSSMVSGYVRNGEYEYALLTFCSMVREQIMVDRFSLTSIVSACANVGILLLGQHIH 286

Query: 343 NQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFV 164
             I +IGY+ D  + +S IDMY K G +  + VIF    Q VD ++   + W+S+I+   
Sbjct: 287 AHIQKIGYKTDVHLGSSYIDMYAKCGSLNDAWVIF---KQTVDLNV---VLWTSMISALA 340

Query: 163 QNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
            +G  +EA++LF  M+QEG   +  +   V +ACS AG+LE+G
Sbjct: 341 LHGQGKEAVRLFEFMIQEGNKPNEVSFVVVLNACSHAGLLEEG 383


>ref|XP_008652203.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Zea mays]
           gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein
           ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  174 bits (441), Expect = 3e-41
 Identities = 94/200 (47%), Positives = 130/200 (65%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           NI+I A L+ GD  G+ +LF  S L+DVSSWNTI++G MR+G    AL  L  MV   V 
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           FS +T+S              GRQ+H +++    E DAF+  SL+DMYCK G+M ++L I
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 241 FNNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSAC 62
           F+  S F +        WS+++AG+VQNG  EEAL+ F +ML+EGV   +F LTSV+SAC
Sbjct: 316 FDRWSDFTED---RQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASAC 372

Query: 61  SDAGILEQGRQIHACIEKLG 2
           ++AG++EQGRQ+H  +EKLG
Sbjct: 373 ANAGMVEQGRQVHGFVEKLG 392



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 43/160 (26%), Positives = 82/160 (51%)
 Frame = -3

Query: 514 SWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIHNQI 335
           +W+T++ G ++NG +  AL     M+   V   QF  +              GRQ+H  +
Sbjct: 329 AWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFV 388

Query: 334 LRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFVQNG 155
            ++G+  DA + ++++DMY KSG +  +  IF ++             W++++  +  +G
Sbjct: 389 EKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA------QTKNVALWTTMLCSYASHG 442

Query: 154 MSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
               AL++FS+M  E ++ +  TL +V SACS +G++  G
Sbjct: 443 QGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDG 482



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
 Frame = -3

Query: 547 LFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETC--VQFSQFTFSXXXXXXXXX 374
           +F  +P + + +W +II+G  R G     +R    M++ C     + F  +         
Sbjct: 80  VFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGL 139

Query: 373 XXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQ---------- 224
                GR+IH  ILR G   D  + N+++DMY K G  G +   F   +Q          
Sbjct: 140 GDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVI 199

Query: 223 ---------------FVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRF 89
                          F + S+ +   W++I++G +++G + EAL    +M++ GV    +
Sbjct: 200 RACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNY 259

Query: 88  TLTSVSSACSDAGILEQGRQIH 23
           T + V +        + GRQ+H
Sbjct: 260 TYSMVFALAGLLSSRDLGRQLH 281


>ref|XP_008218536.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Prunus mume]
          Length = 662

 Score =  171 bits (433), Expect = 2e-40
 Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 6/206 (2%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           N+M+GA++  GD   +++LFR  P +DV+SWNTII G MRNG +  AL LL  MVE    
Sbjct: 206 NVMMGAYMHTGDMEKALDLFRRLPFKDVASWNTIIYGLMRNGHETYALALLSEMVEIGPP 265

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
           F + TFS              GRQIH  +LR G +ND F+R SLIDMY K GKM  + ++
Sbjct: 266 FDKVTFSVALVLASSLYVLELGRQIHGCVLRFGIQNDGFLRTSLIDMYSKCGKMEKASLV 325

Query: 241 F------NNSSQFVDGSIAETIRWSSIIAGFVQNGMSEEALKLFSKMLQEGVIVDRFTLT 80
           F       NS      +  E + WSS+++G+V+NG  E AL  F  M++E ++VDRF++T
Sbjct: 326 FKTLPLRTNSKFTCHETKTEVVSWSSMVSGYVRNGEYEYALLTFCSMVREQIMVDRFSVT 385

Query: 79  SVSSACSDAGILEQGRQIHACIEKLG 2
           S+ SAC++ GIL  G+ IHA I+K+G
Sbjct: 386 SIVSACANVGILLLGQHIHAHIQKIG 411



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 50/163 (30%), Positives = 86/163 (52%)
 Frame = -3

Query: 523 DVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQFSQFTFSXXXXXXXXXXXXXXGRQIH 344
           +V SW+++++G +RNG    AL    +MV   +   +F+ +              G+ IH
Sbjct: 345 EVVSWSSMVSGYVRNGEYEYALLTFCSMVREQIMVDRFSVTSIVSACANVGILLLGQHIH 404

Query: 343 NQILRIGYENDAFIRNSLIDMYCKSGKMGASLVIFNNSSQFVDGSIAETIRWSSIIAGFV 164
             I +IGY+ D  + +S IDMY K G +  + +IF  +           + W+S+I+   
Sbjct: 405 AHIQKIGYKTDVHLGSSYIDMYAKCGSLNDAWMIFKQTCDL------NVVLWTSMISALA 458

Query: 163 QNGMSEEALKLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQG 35
            +G  +EA++LF  M+QEG+  +  +   V +ACS AG+LE+G
Sbjct: 459 LHGQGKEAVQLFILMIQEGIKPNEVSFVVVLNACSHAGLLEEG 501



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
 Frame = -3

Query: 601 NIMIGAHLEIGDANGSMELFRASPLQDVSSWNTIINGQMRNGLDLVALRLLYAMVETCVQ 422
           N +   +++    + + +LF  SP +DV SW  +I+G  R G     L L   M    V 
Sbjct: 74  NYVTSLYVKSNKLDYAHKLFGESPDRDVRSWTILISGFARIGYCRTVLELFKRMQIERVC 133

Query: 421 FSQFTFSXXXXXXXXXXXXXXGRQIHNQILRIGYENDAFIRNSLIDMYCKSGKMGASLVI 242
            +QFT S              G+ IH  IL  G + D  + NS++D+Y K G    +   
Sbjct: 134 PNQFTLSSVLKSCSSLSDFRMGKGIHGWILSNGIDLDVVLENSILDVYVKCGAFDYAEKF 193

Query: 241 FNNSSQ-------------------------FVDGSIAETIRWSSIIAGFVQNGMSEEAL 137
           F    +                         F      +   W++II G ++NG    AL
Sbjct: 194 FETMKERDTVTWNVMMGAYMHTGDMEKALDLFRRLPFKDVASWNTIIYGLMRNGHETYAL 253

Query: 136 KLFSKMLQEGVIVDRFTLTSVSSACSDAGILEQGRQIHACIEKLG 2
            L S+M++ G   D+ T +      S   +LE GRQIH C+ + G
Sbjct: 254 ALLSEMVEIGPPFDKVTFSVALVLASSLYVLELGRQIHGCVLRFG 298


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