BLASTX nr result
ID: Anemarrhena21_contig00024357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00024357
(237 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ... 124 4e-30
emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1... 115 9e-29
gb|AFK49064.1| unknown [Lotus japonicus] 115 3e-28
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 108 1e-21
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 82 1e-13
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 78 3e-12
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 75 2e-11
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 72 1e-10
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 71 3e-10
>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gi|836614536|ref|YP_009145127.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521025|gb|AKJ85882.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521026|gb|AKJ85883.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
Length = 121
Score = 124 bits (312), Expect(2) = 4e-30
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = -1
Query: 183 RKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 4
RKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 61 RKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 120
Query: 3 K 1
K
Sbjct: 121 K 121
Score = 33.5 bits (75), Expect(2) = 4e-30
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 227 SYGYVKYRISNPSR 186
SYGYVKYRISNPSR
Sbjct: 48 SYGYVKYRISNPSR 61
>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
protein in rps12-tRNA-Val intergenic region [Glycine
soja]
Length = 143
Score = 115 bits (288), Expect(2) = 9e-29
Identities = 56/61 (91%), Positives = 58/61 (95%)
Frame = -1
Query: 183 RKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 4
RKR TDTQF+VSKQNSILD+IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 83 RKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 142
Query: 3 K 1
K
Sbjct: 143 K 143
Score = 38.1 bits (87), Expect(2) = 9e-29
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 236 RTRSYGYVKYRISNPSRTGKG 174
RT+SYGYVKYRISNPSR G
Sbjct: 67 RTQSYGYVKYRISNPSRKRGG 87
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 115 bits (287), Expect(2) = 3e-28
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = -1
Query: 183 RKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 4
+KRRETDTQF+VSKQNSILDLIDTYRIL KAVFDESRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 68 KKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 127
Query: 3 K 1
K
Sbjct: 128 K 128
Score = 36.6 bits (83), Expect(2) = 3e-28
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -2
Query: 236 RTRSYGYVKYRISNPSR 186
RT+SYGYVKYRISNPS+
Sbjct: 52 RTQSYGYVKYRISNPSK 68
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 108 bits (270), Expect = 1e-21
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -1
Query: 165 DTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 1
DTQFKVSKQNSILDLID YRILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKPK
Sbjct: 2 DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKPK 56
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 82.0 bits (201), Expect = 1e-13
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -1
Query: 120 IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 1
IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 40
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 77.8 bits (190), Expect = 3e-12
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = -1
Query: 123 LIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKPK 1
+IDTYRIL KAVFDESRMYGL GDLSYLSRSTLQYGVKKPK
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKPK 156
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 75.1 bits (183), Expect = 2e-11
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +1
Query: 76 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPVLLG 195
TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPFP G
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTG 41
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 72.0 bits (175), Expect = 1e-10
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -2
Query: 116 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMGSKSQ 3
+ IE CGKPYS KVVCT WREIFH FRDPPYNM SKSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +1
Query: 85 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPVLLGLEILYFT 216
EYGF QNSICIYEIEYGILFTHFKLSI PPFP +G + Y +
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYIS 275