BLASTX nr result

ID: Anemarrhena21_contig00023682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00023682
         (418 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008805945.1| PREDICTED: uncharacterized protein LOC103718...    71   2e-10
ref|XP_010907241.1| PREDICTED: U11/U12 small nuclear ribonucleop...    67   5e-09
ref|XP_009415943.1| PREDICTED: U11/U12 small nuclear ribonucleop...    61   3e-07

>ref|XP_008805945.1| PREDICTED: uncharacterized protein LOC103718766 [Phoenix
           dactylifera]
          Length = 600

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
 Frame = -2

Query: 417 EPRFEYSEYQAGHKRRKHKEEKNGGSRSPLIYKNNDNVHDQFTHLNEQSDTKALAAKFQM 238
           +P++E+  +   H+  KHK EK  GSRSP  ++N   + D+  +  ++ D   +A +   
Sbjct: 433 KPKYEHYGHWEDHEGSKHKREKKYGSRSPSSHRNYAQLLDRNEYHRDRGD---IADRNDT 489

Query: 237 KFSADNPRYKDYISKSTSESAHDITNQGHKHISEGRCINRDR-IESVRSNPVTTTDFEDR 61
            +S+   R K++IS+ST  S H    + + +IS+ +   R R  ES RS  VT   F DR
Sbjct: 490 SYSS---RSKEHISRSTLTSKH--LKKEYDYISDNKNKERTRTYESHRSESVTQDAFGDR 544

Query: 60  YN-STSHDEYDDSYADLSLGS 1
           Y+ S+S+DEY  +Y D+ +GS
Sbjct: 545 YDPSSSYDEYGATYGDVFVGS 565


>ref|XP_010907241.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
           [Elaeis guineensis]
          Length = 767

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
 Frame = -2

Query: 417 EPRFEYSEYQAGHKRRKHKEEKNGGSRSPLIYKNNDNVHDQFTHLNEQSDTKALAAKFQM 238
           +P++E+  +   H+  KHK E   GSRSP  ++N   +HD+    NE    +        
Sbjct: 598 KPKYEHYGHWEDHEGSKHKRENKYGSRSPSSHRNYAQLHDR----NESH--RERCGMVDW 651

Query: 237 KFSADNPRYKDYISKSTSESAHDITNQGHKHISEGRCINRDRI-ESVRSNPVTTTDFEDR 61
             ++ +   K+  S+ST  S H  + + + +ISE +   R R  ES R+  VT   F DR
Sbjct: 652 NDTSYSSTSKERFSRSTLTSKH--SKKEYDYISENKSKERARTSESHRAESVTQDAFGDR 709

Query: 60  YN-STSHDEYDDSYADLSLGS 1
           Y+ S+S+DEY  +Y D+S+GS
Sbjct: 710 YDPSSSYDEYGATYGDVSVGS 730


>ref|XP_009415943.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
            [Musa acuminata subsp. malaccensis]
            gi|695055519|ref|XP_009415944.1| PREDICTED: U11/U12 small
            nuclear ribonucleoprotein 48 kDa protein [Musa acuminata
            subsp. malaccensis] gi|695055521|ref|XP_009415945.1|
            PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa
            protein [Musa acuminata subsp. malaccensis]
            gi|695055523|ref|XP_009415946.1| PREDICTED: U11/U12 small
            nuclear ribonucleoprotein 48 kDa protein [Musa acuminata
            subsp. malaccensis]
          Length = 777

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
 Frame = -2

Query: 411  RFEYSEYQAGHKRRKHKEEKNGGSRSPLIYKNNDNVHDQFTHLNEQSDTKALAAKFQMKF 232
            ++E  E+     +  H+  KN GS S   +K+  +  D+  H  E       ++K+    
Sbjct: 610  KYEQHEHWEDQDKSMHERWKNYGSSSSSSHKSLASSRDRIAHEKEHGAAVPPSSKYDSMN 669

Query: 231  SADNPRYKDYISKSTSESAHDITNQGHKHISEGRCINRDR-IESVRSNPVTTTDFEDRYN 55
            S    R +D+I++ST  S    + + + HIS  +   RDR     RS  VT   FEDRYN
Sbjct: 670  SGYFSRSRDHINQSTLTSKS--SRREYDHISRDKSKERDRTFGRHRSESVTQDTFEDRYN 727

Query: 54   -STSHDEYDDSYADLSLGS 1
             S S+D+Y  +Y+++S  S
Sbjct: 728  PSDSYDDYHATYSNVSADS 746


Top