BLASTX nr result

ID: Anemarrhena21_contig00023462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00023462
         (467 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009406874.1| PREDICTED: pentatricopeptide repeat-containi...    71   3e-10
ref|XP_010921153.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_006651349.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_008782664.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
gb|ACG44675.1| hypothetical protein [Zea mays]                         58   3e-06
gb|ACF78824.1| unknown [Zea mays]                                      58   3e-06
gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japo...    57   6e-06
ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] g...    57   6e-06
ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06

>ref|XP_009406874.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62680,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 613

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 53/146 (36%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
 Frame = -3

Query: 411 LSANTFKPNSTVATSQQVELLDRAEESE-RLISPIEEINSVSEE----ASTRVAGLVVKN 247
           L +  F+ NS   T  + ELLD  EE E  ++  + E   + EE    A   +  L V+N
Sbjct: 73  LESLEFRRNSRFGTHTEAELLDLVEEEESEILDFVTENGELVEEDFGTAKGELLNLAVEN 132

Query: 246 S----ELSSKEIGSIAEKTCNLDPEIDSSDGNGIKPSTKRSSKLLINHFVKRIINLPTEE 79
                +   +E    AE+   +D   +  +       TKR   L +   +KRII LP EE
Sbjct: 133 DISLVDEKEEENDERAERVVPIDSANEQDE-----ICTKRDGDLNVGGLIKRIIGLPIEE 187

Query: 78  RVKVLDLFECDDELLTISHYNDILLA 1
           RVK+LDLFE D + LTIS  NDIL A
Sbjct: 188 RVKILDLFESDGKSLTISDCNDILTA 213


>ref|XP_010921153.1| PREDICTED: pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial-like [Elaeis guineensis]
          Length = 703

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 61/210 (29%), Positives = 82/210 (39%), Gaps = 77/210 (36%)
 Frame = -3

Query: 399 TFKPNSTVATSQQVELLDRAEESERLISPIEEINSVSEEASTRVAGLVVKNSE------- 241
           TF+ NS + T + VELLD  E+S       E+   V  E + ++ G V++N E       
Sbjct: 76  TFRRNSRLPT-RSVELLDSVEKSGVFPQSAEKDGVVPAEQADKMVGFVLENGEVPDEENG 134

Query: 240 ---------------------LSSKEIGSIAEKTCNLDPEIDSSD-----GNGIKP---- 151
                                ++ KE    AE+   LD + +  D     GNG  P    
Sbjct: 135 ANCDTGVVVGEYPHLVKEDCRIAEKENVRFAEENYALDTDREREDLGFAEGNGTLPTEEG 194

Query: 150 ----------------------------------------STKRSSKLLINHFVKRIINL 91
                                                   S  RS +L I   V++I  L
Sbjct: 195 YDVTNVIEENGGMLEKEQDVLVDFTERRVYSPTGNVRSLDSCHRSGRLHIGELVQKISGL 254

Query: 90  PTEERVKVLDLFECDDELLTISHYNDILLA 1
           P EERVKVLDLF+ DD+ LTIS YNDIL+A
Sbjct: 255 PIEERVKVLDLFQYDDKSLTISDYNDILIA 284


>ref|XP_006651349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Oryza brachyantha]
          Length = 507

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -3

Query: 240 LSSKEIGSIAEKTCNLDPEID---SSDGNGIKPSTKRSSKLLINHFVKRIINLPTEERVK 70
           L+S   GS+      LDP  +   S DG G +PS    S+L      KRI+ LP EERVK
Sbjct: 60  LASNGNGSVVSTQKVLDPGSEGDESGDGGGRRPS----SRLRARDCAKRIMGLPVEERVK 115

Query: 69  VLDLFECDDELLTISHYNDILLA 1
           VLDL +C D  LT+S YNDI+ A
Sbjct: 116 VLDLLQCKDGELTVSDYNDIISA 138


>ref|XP_008782664.1| PREDICTED: pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial-like [Phoenix dactylifera]
          Length = 587

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = -3

Query: 174 SDGNGIKP--STKRSSKLLINHFVKRIINLPTEERVKVLDLFECDDELLTISHYNDILLA 1
           S  N +K   S  RS +L +   VK+I  LP EERVKVLD+FE DD+ LTIS YNDIL+A
Sbjct: 108 SPANSVKSLDSCHRSGRLHVGDLVKKISGLPIEERVKVLDVFEYDDKSLTISDYNDILIA 167


>gb|ACG44675.1| hypothetical protein [Zea mays]
          Length = 558

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/58 (56%), Positives = 38/58 (65%)
 Frame = -3

Query: 174 SDGNGIKPSTKRSSKLLINHFVKRIINLPTEERVKVLDLFECDDELLTISHYNDILLA 1
           SDG G   S+KRS +       KRI+ LP EERVKVLDL + DD  LT+S YNDIL A
Sbjct: 98  SDGPGGDGSSKRS-RFCARDCAKRIMELPVEERVKVLDLLQRDDAALTVSDYNDILSA 154


>gb|ACF78824.1| unknown [Zea mays]
          Length = 558

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/58 (56%), Positives = 38/58 (65%)
 Frame = -3

Query: 174 SDGNGIKPSTKRSSKLLINHFVKRIINLPTEERVKVLDLFECDDELLTISHYNDILLA 1
           SDG G   S+KRS +       KRI+ LP EERVKVLDL + DD  LT+S YNDIL A
Sbjct: 98  SDGPGGDGSSKRS-RFCARDCAKRIMELPVEERVKVLDLLQRDDAALTVSDYNDILSA 154


>gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
          Length = 523

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = -3

Query: 195 LDPEIDSSDGNGIKPSTKRSSKLLINHFVKRIINLPTEERVKVLDLFECDDELLTISHYN 16
           ++ E ++ DG G     +R +++      KRI+ LP EERVKVLDL + DD  LT+S YN
Sbjct: 76  VEEEKEAGDGGG---GGRRGTRIRARDCAKRIMGLPVEERVKVLDLLQRDDGALTVSDYN 132

Query: 15  DILLA 1
           DIL A
Sbjct: 133 DILSA 137


>ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
           gi|108708021|gb|ABF95816.1| expressed protein [Oryza
           sativa Japonica Group] gi|113548508|dbj|BAF11951.1|
           Os03g0336000 [Oryza sativa Japonica Group]
           gi|125543773|gb|EAY89912.1| hypothetical protein
           OsI_11461 [Oryza sativa Indica Group]
           gi|215712300|dbj|BAG94427.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 545

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = -3

Query: 195 LDPEIDSSDGNGIKPSTKRSSKLLINHFVKRIINLPTEERVKVLDLFECDDELLTISHYN 16
           ++ E ++ DG G     +R +++      KRI+ LP EERVKVLDL + DD  LT+S YN
Sbjct: 76  VEEEKEAGDGGG---GGRRGTRIRARDCAKRIMGLPVEERVKVLDLLQRDDGALTVSDYN 132

Query: 15  DILLA 1
           DIL A
Sbjct: 133 DILSA 137


>ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Brachypodium distachyon]
          Length = 538

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 144 KRSSKLLINHFVKRIINLPTEERVKVLDLFECDDELLTISHYNDILLA 1
           +RSS+L      +RI++LP EERVKVLDL + DD  LTIS YNDIL A
Sbjct: 84  RRSSRLRARDCARRIMSLPMEERVKVLDLLQRDDAALTISDYNDILSA 131


Top