BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00023423
         (1180 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010910203.1| PREDICTED: pentatricopeptide repeat-containi...   432   e-118
ref|XP_008803811.1| PREDICTED: putative pentatricopeptide repeat...   430   e-117
ref|XP_009385429.1| PREDICTED: putative pentatricopeptide repeat...   416   e-113
ref|XP_010252255.1| PREDICTED: putative pentatricopeptide repeat...   382   e-103
ref|XP_010252253.1| PREDICTED: putative pentatricopeptide repeat...   382   e-103
emb|CBI35029.3| unnamed protein product [Vitis vinifera]              367   9e-99
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat...   367   9e-99
ref|XP_008230712.1| PREDICTED: putative pentatricopeptide repeat...   360   1e-96
emb|CDP02185.1| unnamed protein product [Coffea canephora]            359   2e-96
ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, part...   349   2e-93
ref|XP_008348053.1| PREDICTED: pentatricopeptide repeat-containi...   348   3e-93
ref|XP_004233685.2| PREDICTED: putative pentatricopeptide repeat...   347   8e-93
ref|XP_008379814.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   347   8e-93
ref|XP_004304947.2| PREDICTED: pentatricopeptide repeat-containi...   347   1e-92
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat...   345   4e-92
ref|XP_009795981.1| PREDICTED: putative pentatricopeptide repeat...   337   1e-89
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr...   334   7e-89
ref|NP_189507.2| pentatricopeptide repeat-containing protein [Ar...   332   3e-88
ref|XP_012483694.1| PREDICTED: putative pentatricopeptide repeat...   327   8e-87
gb|KFK33747.1| hypothetical protein AALP_AA5G054800 [Arabis alpina]   326   2e-86

>ref|XP_010910203.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Elaeis guineensis]
          Length = 514

 Score =  432 bits (1111), Expect = e-118
 Identities = 222/396 (56%), Positives = 281/396 (70%), Gaps = 6/396 (1%)
 Frame = -2

Query: 1173 WQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--LPY 1000
            WQRC SLLQ CS    L++ HA L+T+G                RL++ +CSL    L +
Sbjct: 8    WQRCFSLLQRCSDERQLRAAHAFLLTHGLLRHPSALG-------RLVLASCSLRPPALSH 60

Query: 999  ASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFALAAC 820
            A+LL RH P+P N+F +N LIRA++R P P H+L++F L+LRSP+A PDHH++PFALAAC
Sbjct: 61   ATLLLRHPPAPLNAFAYNALIRAHARGPDPTHALAFFRLLLRSPSASPDHHSYPFALAAC 120

Query: 819  AAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDPVHL 640
            AAIPSI  G+QIH  V K GL+S D +VQTAL+R Y       +A  LFDE P+RDPVH 
Sbjct: 121  AAIPSIPAGAQIHAMVYKTGLASTDHYVQTALLRLYAGLPY--EARKLFDETPQRDPVHW 178

Query: 639  DVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKHLLN 460
            DVLMNAY+  G P  A++LF +ML  G+ PD   +TTALTAC+ +GA  +GVWIHK +  
Sbjct: 179  DVLMNAYIRCGLPSDAVRLFQDMLLAGIEPDEFTVTTALTACAHSGAYREGVWIHKFI-- 236

Query: 459  DKK----MRDTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +KK    + DT+IASAL++MYAKCG I EAV+VF +VPE+N  MW+ M+GGFA+HGL K+
Sbjct: 237  EKKDPSFLNDTFIASALVSMYAKCGCIKEAVKVFDAVPEKNRHMWATMVGGFAVHGLVKE 296

Query: 291  AIECLSRMQQEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCAV 112
            AI CL RMQ++G+  DG+V+           LV +GL LLA+ME+ Y V P+HEHYSCAV
Sbjct: 297  AICCLDRMQEDGLHPDGIVLLGALTACAHAGLVDDGLRLLAEMETCYGVKPEHEHYSCAV 356

Query: 111  DMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
            DMLCRVGRL DA+ LI  MPMRPLASVWGSLL GCR
Sbjct: 357  DMLCRVGRLNDALGLIHGMPMRPLASVWGSLLTGCR 392


>ref|XP_008803811.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Phoenix dactylifera]
          Length = 514

 Score =  430 bits (1105), Expect = e-117
 Identities = 224/399 (56%), Positives = 282/399 (70%), Gaps = 8/399 (2%)
 Frame = -2

Query: 1173 WQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--LPY 1000
            WQ C SLL+ CS    L++ HA L+T+G                RL++ +CSL    L +
Sbjct: 8    WQWCFSLLRRCSDERQLRAAHAFLLTHGPLRHPSVLG-------RLVLASCSLRPPALFH 60

Query: 999  ASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFALAAC 820
            A+LL RH P+P N+F +N LIRA+SR P P   L++F L+LRSP+A PDHH++PFALAAC
Sbjct: 61   AALLLRHPPAPLNAFSYNALIRAHSRGPDPARGLAFFRLLLRSPSASPDHHSYPFALAAC 120

Query: 819  AAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFY--MQDENLNQACNLFDEIPRRDPV 646
            AAIPSI  G+QIH  V KNGL+SAD +VQTAL+R Y  + DE    A  LFDE P+RDPV
Sbjct: 121  AAIPSIPAGAQIHSMVYKNGLASADHYVQTALLRLYAGLPDE----ARKLFDETPQRDPV 176

Query: 645  HLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKHL 466
            H DVLMNAY+  G P  AL+LF +ML  G+ PD   +TTALTAC+ +G   +GVWIH+++
Sbjct: 177  HWDVLMNAYIRHGLPSDALRLFRDMLLAGIEPDEFTVTTALTACAHSGTFREGVWIHRYI 236

Query: 465  LNDKK----MRDTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLA 298
              +KK    + DT+IAS+L++MYAKCG I EAV VF +VPE+NT MW+ MIGGFA+HGLA
Sbjct: 237  --EKKDPSFLNDTFIASSLVSMYAKCGCIEEAVRVFDAVPEKNTHMWATMIGGFAVHGLA 294

Query: 297  KDAIECLSRMQQEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSC 118
            K+AI CL RM ++G+  DG+V+           LV +GL LLA+ME+ Y V P+HEHYSC
Sbjct: 295  KEAICCLGRMLEDGVHPDGIVLLGSLAACAHAGLVEDGLRLLAEMETCYGVKPEHEHYSC 354

Query: 117  AVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            AVDMLCRVGRL DA+ LI  MPMRP ASVWGSLL GCRI
Sbjct: 355  AVDMLCRVGRLNDALGLIHGMPMRPRASVWGSLLTGCRI 393


>ref|XP_009385429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Musa acuminata subsp. malaccensis]
          Length = 514

 Score =  416 bits (1070), Expect = e-113
 Identities = 216/401 (53%), Positives = 287/401 (71%), Gaps = 8/401 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--L 1006
            ++W RC++LL+ CS+  HL++ HAL ++ G                RLI+ ACSL    L
Sbjct: 18   RAWNRCMALLRRCSSERHLRAAHALFVSGGLHRHPFALS-------RLILAACSLRPPAL 70

Query: 1005 PYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSP--AAPPDHHTFPFA 832
             YASLLF  SPSPPNSF+ N LIRA++R P P  +LS+F L+LR+P  +A  DHH+FPFA
Sbjct: 71   AYASLLFHRSPSPPNSFMHNALIRAHARGPDPAAALSFFRLLLRAPPASAAADHHSFPFA 130

Query: 831  LAACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRD 652
            LAAC A  S++ G+QIH  V+KNGL SAD +VQTA++R Y    +  +A  +FDEI  RD
Sbjct: 131  LAACGASGSLATGAQIHALVVKNGLFSADHYVQTAVLRLYCNATD--EAAKVFDEISVRD 188

Query: 651  PVHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHK 472
             VH DVLMNA++  G P +AL+LF ++L   + PD  A TTALTAC+ AGAL+QGV IHK
Sbjct: 189  AVHYDVLMNAFIRAGLPSEALRLFDHLLISRIEPDEFAATTALTACAHAGALKQGVRIHK 248

Query: 471  HLLNDKK---MRDTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGL 301
             L+  K    +RDT++ SAL++MYAKCG I +AV+VF ++PERNT MW+ MIG +AMHG 
Sbjct: 249  -LVEGKGPSFLRDTFLGSALVSMYAKCGCIKDAVDVFNAMPERNTHMWATMIGAYAMHGF 307

Query: 300  AKDAIECLSRMQQE-GMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHY 124
            +K+A+ CL RMQ+E G++ DG+V+           LV +GL LLA+ME+R+ V+P+HEHY
Sbjct: 308  SKEAMACLRRMQEEDGLRPDGIVLLGALAACVHAGLVEDGLQLLAEMEARHSVIPEHEHY 367

Query: 123  SCAVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            SCAVDMLCR GRL++A+ L+ +MPMRPLASVWGSLL GCR+
Sbjct: 368  SCAVDMLCRAGRLDEALHLVREMPMRPLASVWGSLLTGCRV 408


>ref|XP_010252255.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 isoform X2 [Nelumbo nucifera]
          Length = 478

 Score =  382 bits (981), Expect = e-103
 Identities = 199/396 (50%), Positives = 267/396 (67%), Gaps = 5/396 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSL---NN 1009
            Q+W+RCL+L   CST+  L++IHAL I +G                  +++ C+L    +
Sbjct: 14   QAWKRCLALAHRCSTMQQLKAIHALFIVHGFHRNNYAISK--------LISFCALPVSGS 65

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASLLF H    PNSFI+NTLIRAYSR+  P  +L YF LML      PD HTFPFAL
Sbjct: 66   LSYASLLF-HQTQSPNSFIYNTLIRAYSRASLPLLALDYFRLMLCDHNVVPDQHTFPFAL 124

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
            AACA+I  +  G QIH  VLKNGL+S    VQTAL+R Y++  +L+ A N+FDEI ++D 
Sbjct: 125  AACASISWVPAGKQIHSCVLKNGLASFSNHVQTALVRLYVECVDLDGAQNVFDEIQKKDA 184

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            +  +VL+N YL   S  +AL +F NM    + PD   I T LTAC+ +GAL+QG+WIH++
Sbjct: 185  IQWNVLINGYLRWVSASEALNIFRNMFS-DVKPDEFCIATGLTACAHSGALQQGIWIHEY 243

Query: 468  L-LNDKKMRDTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   D    D ++ +AL++MYAKCG I +AVE F+ +P+RN F W+AMIGG+A+HG AK+
Sbjct: 244  IKKRDAFTEDVFVGTALVDMYAKCGCIDKAVEAFRCMPKRNVFSWAAMIGGYAVHGFAKE 303

Query: 291  AIECLSRMQQEG-MQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            A+ CL +MQ+E  +  DGVV+           L+ EGL LL  MES+Y VVP+HEHYSC 
Sbjct: 304  ALHCLEKMQEEDELMPDGVVLLGVLTACKHAGLLEEGLFLLNHMESKYGVVPKHEHYSCT 363

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGC 7
            VD+LCR GRL++A++LI +MPM+PLASVWGSLL+GC
Sbjct: 364  VDLLCRAGRLDEALKLIRRMPMKPLASVWGSLLSGC 399



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
 Frame = -2

Query: 951 FNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFALAACAAIPSISFGSQIHCFV 772
           +N LI  Y R      +L+ F  M       PD       L ACA   ++  G  IH ++
Sbjct: 187 WNVLINGYLRWVSASEALNIFRNMFSD--VKPDEFCIATGLTACAHSGALQQGIWIHEYI 244

Query: 771 LKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDPVHLDVLMNAYLHRGSPDKA 592
            K    + D FV TAL+  Y +   +++A   F  +P+R+      ++  Y   G   +A
Sbjct: 245 KKRDAFTEDVFVGTALVDMYAKCGCIDKAVEAFRCMPKRNVFSWAAMIGGYAVHGFAKEA 304

Query: 591 LQLFGNMLQVG-LTPDSHAITTALTACSQAGALEQGVWIHKHLLNDKKMRDTYIA-SALI 418
           L     M +   L PD   +   LTAC  AG LE+G+++  H+ +   +   +   S  +
Sbjct: 305 LHCLEKMQEEDELMPDGVVLLGVLTACKHAGLLEEGLFLLNHMESKYGVVPKHEHYSCTV 364

Query: 417 NMYAKCGSIGEAVEVFKSVPERN-TFMWSAMIGGFAMHG---LAKDAIECLSRMQQEGMQ 250
           ++  + G + EA+++ + +P +    +W +++ G +M G   LA+ A+E L +++Q+ ++
Sbjct: 365 DLLCRAGRLDEALKLIRRMPMKPLASVWGSLLSGCSMRGNVELAELAVEELLQLEQDALE 424

Query: 249 VDGVVI 232
            DG  +
Sbjct: 425 EDGAYV 430


>ref|XP_010252253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 isoform X1 [Nelumbo nucifera]
          Length = 516

 Score =  382 bits (981), Expect = e-103
 Identities = 199/396 (50%), Positives = 267/396 (67%), Gaps = 5/396 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSL---NN 1009
            Q+W+RCL+L   CST+  L++IHAL I +G                  +++ C+L    +
Sbjct: 14   QAWKRCLALAHRCSTMQQLKAIHALFIVHGFHRNNYAISK--------LISFCALPVSGS 65

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASLLF H    PNSFI+NTLIRAYSR+  P  +L YF LML      PD HTFPFAL
Sbjct: 66   LSYASLLF-HQTQSPNSFIYNTLIRAYSRASLPLLALDYFRLMLCDHNVVPDQHTFPFAL 124

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
            AACA+I  +  G QIH  VLKNGL+S    VQTAL+R Y++  +L+ A N+FDEI ++D 
Sbjct: 125  AACASISWVPAGKQIHSCVLKNGLASFSNHVQTALVRLYVECVDLDGAQNVFDEIQKKDA 184

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            +  +VL+N YL   S  +AL +F NM    + PD   I T LTAC+ +GAL+QG+WIH++
Sbjct: 185  IQWNVLINGYLRWVSASEALNIFRNMFS-DVKPDEFCIATGLTACAHSGALQQGIWIHEY 243

Query: 468  L-LNDKKMRDTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   D    D ++ +AL++MYAKCG I +AVE F+ +P+RN F W+AMIGG+A+HG AK+
Sbjct: 244  IKKRDAFTEDVFVGTALVDMYAKCGCIDKAVEAFRCMPKRNVFSWAAMIGGYAVHGFAKE 303

Query: 291  AIECLSRMQQEG-MQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            A+ CL +MQ+E  +  DGVV+           L+ EGL LL  MES+Y VVP+HEHYSC 
Sbjct: 304  ALHCLEKMQEEDELMPDGVVLLGVLTACKHAGLLEEGLFLLNHMESKYGVVPKHEHYSCT 363

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGC 7
            VD+LCR GRL++A++LI +MPM+PLASVWGSLL+GC
Sbjct: 364  VDLLCRAGRLDEALKLIRRMPMKPLASVWGSLLSGC 399



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
 Frame = -2

Query: 951 FNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFALAACAAIPSISFGSQIHCFV 772
           +N LI  Y R      +L+ F  M       PD       L ACA   ++  G  IH ++
Sbjct: 187 WNVLINGYLRWVSASEALNIFRNMFSD--VKPDEFCIATGLTACAHSGALQQGIWIHEYI 244

Query: 771 LKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDPVHLDVLMNAYLHRGSPDKA 592
            K    + D FV TAL+  Y +   +++A   F  +P+R+      ++  Y   G   +A
Sbjct: 245 KKRDAFTEDVFVGTALVDMYAKCGCIDKAVEAFRCMPKRNVFSWAAMIGGYAVHGFAKEA 304

Query: 591 LQLFGNMLQVG-LTPDSHAITTALTACSQAGALEQGVWIHKHLLNDKKMRDTYIA-SALI 418
           L     M +   L PD   +   LTAC  AG LE+G+++  H+ +   +   +   S  +
Sbjct: 305 LHCLEKMQEEDELMPDGVVLLGVLTACKHAGLLEEGLFLLNHMESKYGVVPKHEHYSCTV 364

Query: 417 NMYAKCGSIGEAVEVFKSVPERN-TFMWSAMIGGFAMHG---LAKDAIECLSRMQQEGMQ 250
           ++  + G + EA+++ + +P +    +W +++ G +M G   LA+ A+E L +++Q+ ++
Sbjct: 365 DLLCRAGRLDEALKLIRRMPMKPLASVWGSLLSGCSMRGNVELAELAVEELLQLEQDALE 424

Query: 249 VDGVVI 232
            DG  +
Sbjct: 425 EDGAYV 430


>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score =  367 bits (942), Expect = 9e-99
 Identities = 190/397 (47%), Positives = 260/397 (65%), Gaps = 5/397 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            ++W+RC+SL Q CS +   ++IHAL I NG                  +++ C+L+N   
Sbjct: 2    EAWKRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISK--------LISFCALSNSGS 53

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASL+F    +P N F +NTLIRAYSRS  P  +L YF LML      PD HTFPF +
Sbjct: 54   LSYASLIFSQIQNP-NLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFII 112

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
            +AC     +  G QIH +VLKNG++S+D  VQTAL+RFY +   +  A  LFDEIP  D 
Sbjct: 113  SACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDV 172

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            V  +VL+N Y+ RG   +AL  F NML  G+ PD   +TTAL  C+Q GAL+QG WIH++
Sbjct: 173  VQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEY 232

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   K +  D +I +AL++MYAKCG I  +VEVF+ + +RN F WSAMIGGFA+HG  + 
Sbjct: 233  VTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRK 292

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            A++CL RMQ ++G++ DGVV+           L  EG  LL  ME+RY ++P+HEHYSC 
Sbjct: 293  AMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCM 352

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
            VD+LCR G+L++A++LI +MPM+P A+VWG+LL+GCR
Sbjct: 353  VDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCR 389


>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Vitis vinifera]
          Length = 511

 Score =  367 bits (942), Expect = 9e-99
 Identities = 190/397 (47%), Positives = 260/397 (65%), Gaps = 5/397 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            ++W+RC+SL Q CS +   ++IHAL I NG                  +++ C+L+N   
Sbjct: 2    EAWKRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISK--------LISFCALSNSGS 53

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASL+F    +P N F +NTLIRAYSRS  P  +L YF LML      PD HTFPF +
Sbjct: 54   LSYASLIFSQIQNP-NLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFII 112

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
            +AC     +  G QIH +VLKNG++S+D  VQTAL+RFY +   +  A  LFDEIP  D 
Sbjct: 113  SACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDV 172

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            V  +VL+N Y+ RG   +AL  F NML  G+ PD   +TTAL  C+Q GAL+QG WIH++
Sbjct: 173  VQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEY 232

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   K +  D +I +AL++MYAKCG I  +VEVF+ + +RN F WSAMIGGFA+HG  + 
Sbjct: 233  VTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRK 292

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            A++CL RMQ ++G++ DGVV+           L  EG  LL  ME+RY ++P+HEHYSC 
Sbjct: 293  AMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCM 352

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
            VD+LCR G+L++A++LI +MPM+P A+VWG+LL+GCR
Sbjct: 353  VDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCR 389


>ref|XP_008230712.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Prunus mume] gi|645249349|ref|XP_008230713.1|
            PREDICTED: putative pentatricopeptide repeat-containing
            protein At3g28640 [Prunus mume]
          Length = 511

 Score =  360 bits (923), Expect = 1e-96
 Identities = 186/398 (46%), Positives = 263/398 (66%), Gaps = 5/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            Q+W+RC+SL Q CS +  L++ HA+ IT G                  ++  C+L+N   
Sbjct: 19   QAWKRCMSLAQGCSNMRKLKATHAIFITYGLHLNNYAISK--------LIAFCALSNSGD 70

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASLLF    +P NS+++NTLIRAYSRS QPH ++ YFLLML+  +  PD++TF F +
Sbjct: 71   LAYASLLFNQIQTP-NSYMYNTLIRAYSRSSQPHLAVHYFLLMLKQSSLGPDNYTFNFVI 129

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
             ACA    +  G QIH +V+KNGL   D  VQTAL+R Y + + L+ +  +FDEIP RD 
Sbjct: 130  LACANCSWLVSGRQIHNWVVKNGLFLVDAHVQTALVRLYAECKVLDDSKKVFDEIPERDV 189

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            +  +VLMN Y+  G   +AL++F +ML  G  PD+  + T LTAC+  GAL QG WIH++
Sbjct: 190  MQWNVLMNGYVRCGLASEALKVFRDMLVTGFEPDNFCVATGLTACAHLGALRQGKWIHEY 249

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +     ++ D +I +AL++MYAKCG I  AVE F+ +P+RN   W+AMIGGFA HG A +
Sbjct: 250  VKKRTGLKSDVFIGTALVDMYAKCGCIDLAVEAFEGMPKRNVVSWAAMIGGFAAHGYATN 309

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            AI  L RMQ  +G++ DGVV+           L+ +G LLL  M+++Y +VP+HEHYSC 
Sbjct: 310  AIHSLERMQMDDGLRPDGVVLLAVLMACTHAGLLEKGKLLLDNMKTQYEIVPKHEHYSCV 369

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            +D+LC+ G+L +A++LI +MPM+PLASVWG+LL+GCRI
Sbjct: 370  IDLLCKAGQLNEALKLIRRMPMKPLASVWGALLSGCRI 407


>emb|CDP02185.1| unnamed protein product [Coffea canephora]
          Length = 525

 Score =  359 bits (922), Expect = 2e-96
 Identities = 192/398 (48%), Positives = 263/398 (66%), Gaps = 5/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSL---NN 1009
            ++W+ C+ ++  C+++  L++IH++ IT+G                  ++  C+L    +
Sbjct: 24   RAWKWCMCIIGRCTSMQELKAIHSIFITHGLHRNNYAVSK--------LLDFCALADCGD 75

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASLLF   PSP + +++NTLI+AYS SPQPH +L  F LMLRS   PPD +TFPF L
Sbjct: 76   LSYASLLFTQLPSP-SCYLYNTLIKAYSTSPQPHLALQCFNLMLRS-LLPPDGYTFPFVL 133

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
             AC+     S G Q+HC+V KNGL+SA+P VQTALIRFY   ++L  A  LF EI   D 
Sbjct: 134  IACSNGCFTSEGEQLHCWVTKNGLASANPHVQTALIRFYAASKSLVAARQLFGEITDSDV 193

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            V  +VL++ Y+  G   +AL +F  ML  G+ PD   +TT LTAC++ GALEQG WIH++
Sbjct: 194  VQCNVLISGYVKCGMASEALDVFRGMLLRGVEPDEFCLTTGLTACAKLGALEQGKWIHEY 253

Query: 468  LLNDKKM-RDTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +     M  DT+I + L++MYAKCG I  AVEVF+S+P+RN F W++MIGGFA HG A+ 
Sbjct: 254  IRRRNLMGSDTFIGTQLVDMYAKCGCIDMAVEVFESIPKRNKFSWASMIGGFAAHGYARK 313

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            AI+CL RMQ ++G++ DG+VI           L REG  LL  ME+ Y V P+HEHYSC 
Sbjct: 314  AIDCLERMQAEDGIKPDGIVILGVLAACTHAGLPREGQFLLNNMETLYGVPPEHEHYSCI 373

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            VD+LCR G+L +A+ELI  MPM+ LASVWG+ L+GCR+
Sbjct: 374  VDLLCRAGQLCEALELIRSMPMKALASVWGAFLSGCRM 411


>ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
            gi|462412559|gb|EMJ17608.1| hypothetical protein
            PRUPE_ppa022709mg, partial [Prunus persica]
          Length = 541

 Score =  349 bits (896), Expect = 2e-93
 Identities = 183/392 (46%), Positives = 256/392 (65%), Gaps = 5/392 (1%)
 Frame = -2

Query: 1161 LSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN---LPYASL 991
            +SL Q CS +  L++ HA+ ITNG                  ++  C+L+N   L YASL
Sbjct: 1    MSLAQGCSNMRKLKATHAIFITNGLHLNNYAISK--------LIAFCALSNSGDLSYASL 52

Query: 990  LFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFALAACAAI 811
            LF    +P NS+++NTLIRAYSRS QPH ++ YFLLML+  +  PD++TF F + ACA  
Sbjct: 53   LFNQIQTP-NSYLYNTLIRAYSRSSQPHLAVHYFLLMLKQSSLGPDNYTFNFVILACANC 111

Query: 810  PSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDPVHLDVL 631
              +  G QIH +V+KNGL   D  VQTAL+R Y + + L+ +  +FDEIP RD +  +VL
Sbjct: 112  SWLVSGRQIHNWVVKNGLFLVDAHVQTALVRLYAECKVLDDSKKVFDEIPERDVIQWNVL 171

Query: 630  MNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKHLLNDKK 451
            MN Y+  G   +AL++F +ML  G  PD+  + T L AC+  GAL QG WI +++     
Sbjct: 172  MNGYVRCGLASEALKVFRDMLVTGFEPDNFCVATGLAACAHLGALRQGKWIDEYVKKRTG 231

Query: 450  MR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKDAIECLS 274
            ++ D +I +AL++MYAKCG I  AVE F+ +P+RN   W+AMIGGFA HG A +AI  L 
Sbjct: 232  LKSDVFIGTALVDMYAKCGCIDLAVEAFEGMPKRNVVSWAAMIGGFAAHGCATNAIHSLE 291

Query: 273  RMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCAVDMLCR 97
            RMQ  +G++ DGVV+           L+ +G LLL  M+++Y +VP+HEHYSC +D+LC+
Sbjct: 292  RMQVDDGLRPDGVVLLVVLMACTHAGLLEKGKLLLDNMKTQYGIVPKHEHYSCVIDLLCK 351

Query: 96   VGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
             GRL +A++LI KMPM+PLASVWG+LL+GCRI
Sbjct: 352  AGRLNEALKLIRKMPMKPLASVWGALLSGCRI 383


>ref|XP_008348053.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Malus domestica]
          Length = 499

 Score =  348 bits (894), Expect = 3e-93
 Identities = 176/398 (44%), Positives = 256/398 (64%), Gaps = 5/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLN---N 1009
            Q+W RC+SL Q CS++ +L++ HA+ +T+G                  ++  C+L+   N
Sbjct: 9    QAWSRCMSLAQRCSSMRNLRATHAVFVTSGVHLNTYAVSK--------LIAFCALSDSGN 60

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            LPYASLLF  + +  N +I+NTLIRAY RS +PH ++ YF LML+     PD++TF F +
Sbjct: 61   LPYASLLFEQTQTX-NLYIYNTLIRAYYRSSEPHLAMYYFHLMLKQSCLEPDNYTFNFVI 119

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
              C     +  G +IH +V+KNGL   D  VQTAL+R Y + + L+ A  +FDEI  RD 
Sbjct: 120  LGCVNCSCLVSGKEIHSWVVKNGLVLLDAHVQTALVRLYAECKVLDDARKVFDEIHHRDV 179

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            +   VL+N YL  G   +AL++F  ML  G  PD   + T L AC+  GAL QG WIH++
Sbjct: 180  IQWXVLVNGYLKCGLASEALEVFREMLVCGFEPDDFCVATGLAACANLGALWQGKWIHEY 239

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   K+++ D ++ +AL++MYAKCG I  AVE F+ + +RN   W+AMIGGFA HG A +
Sbjct: 240  VKKRKELKSDVFVGTALVDMYAKCGXINLAVEAFEGMSKRNAVSWAAMIGGFAAHGYATE 299

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            A  CL RMQ  +G++ DGVV+           L+ +G  LL  M+++Y +VP+HEHYSC 
Sbjct: 300  AFHCLDRMQVVDGLRPDGVVLLGVLMACTHAGLLEKGKSLLENMKTQYGIVPKHEHYSCV 359

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            +D+LC+ G+LE+A++LI +MPM+PLASVWG+LL+GCR+
Sbjct: 360  IDLLCKAGQLEEALQLIRRMPMKPLASVWGALLSGCRV 397


>ref|XP_004233685.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Solanum lycopersicum]
          Length = 512

 Score =  347 bits (891), Expect = 8e-93
 Identities = 190/398 (47%), Positives = 259/398 (65%), Gaps = 6/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            Q W+ C+S+ + C+ +  L++IHA+ IT G                  ++  C+L+N   
Sbjct: 18   QIWKWCMSMAEKCNNMRQLKAIHAIYITLGLQRNTYAVSK--------LLDFCALSNSGD 69

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLR-SPAAPPDHHTFPFA 832
            L YAS +F    +P N+F++N LIRAYS SPQP  SL+YF LM++ S AA PD  TFPF 
Sbjct: 70   LSYASRIFAQVQTP-NAFLYNALIRAYSSSPQPQVSLNYFNLMVQTSNAAAPDSFTFPFL 128

Query: 831  LAACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRD 652
            L ACA  P    G QIH +++KN  S+++  VQTALIRFY   + L+ A  +FDEI   D
Sbjct: 129  LIACANGPLEVEGKQIHSWIIKNSFSASNAHVQTALIRFYTNCKALDDARKVFDEITDID 188

Query: 651  PVHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHK 472
             +  +VLM+ +L  G   +AL +F +ML  G+ PD + +TTAL AC+Q GALEQG WIH+
Sbjct: 189  VIQCNVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIHE 248

Query: 471  HLLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAK 295
            H+   + +  D +I SAL++MYAKCGSI  A EVF+S+P RN   W+ MI GFA+HG  +
Sbjct: 249  HVTKSEWLEYDVFIGSALVDMYAKCGSINLASEVFESMPTRNKHSWATMIRGFAVHGRPE 308

Query: 294  DAIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSC 118
             A+ CL RMQ  +G++ DGVVI           L +EG  LL +MES Y V P+HEH+SC
Sbjct: 309  LALSCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSC 368

Query: 117  AVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
             VD+LCR GRL+DA++LI +MPM+P ASVWG+LL+GCR
Sbjct: 369  VVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCR 406


>ref|XP_008379814.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g28660-like [Malus domestica]
          Length = 499

 Score =  347 bits (891), Expect = 8e-93
 Identities = 175/398 (43%), Positives = 256/398 (64%), Gaps = 5/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLN---N 1009
            Q+W RC+ L Q C+++ +L++ HA+ +T+G                  ++  C+L+   N
Sbjct: 9    QAWSRCICLAQRCTSMLNLRATHAVFVTSGVHLNTYAVSK--------LIAFCALSDSGN 60

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            LPYASLLF  + +P N +I+NTLIRAY RS +PH ++ YF LML+     PD++TF F +
Sbjct: 61   LPYASLLFEQTQTP-NLYIYNTLIRAYYRSSEPHLAMYYFHLMLKQSCLEPDNYTFNFVI 119

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
              C     +  G +IH +V+KNGL   D  VQTAL+R Y + + L+ A  +FDEI  RD 
Sbjct: 120  LGCVNCSCLVSGKEIHSWVVKNGLVLLDAHVQTALVRLYAECKVLDDARKVFDEIHHRDV 179

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            +   VL+N YL  G   +AL++F  ML  G  PD   + T L AC+  GAL QG WIH++
Sbjct: 180  IQWXVLVNGYLKCGLASEALEVFREMLVCGFEPDDFCVATGLAACANLGALWQGKWIHEY 239

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   K+++ D ++ +AL++MYAKCG I  AVE F+ + +RN   W+AMIGGFA HG A +
Sbjct: 240  VKKRKELKSDVFVGTALVDMYAKCGXINLAVEAFEGMSKRNAVSWAAMIGGFAAHGYATE 299

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            A  CL RMQ  +G++ DGVV+           L+ +G  LL  M+++Y +VP+HEHYSC 
Sbjct: 300  AFHCLDRMQVVDGLRPDGVVLLGVLMACTHAGLLEKGKSLLENMKTQYGIVPKHEHYSCV 359

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            +D+LC+ G+LE+A++LI +MPM+PLASVWG+LL+GCR+
Sbjct: 360  IDLLCKAGQLEEALQLIRRMPMKPLASVWGALLSGCRV 397


>ref|XP_004304947.2| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Fragaria vesca subsp. vesca]
          Length = 507

 Score =  347 bits (890), Expect = 1e-92
 Identities = 180/398 (45%), Positives = 255/398 (64%), Gaps = 5/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            Q+W+RC+SL Q C+T+  L+  HA+ IT+G                  ++  C+L++   
Sbjct: 16   QAWKRCMSLAQCCTTMRSLKPTHAVFITHGLHLNNFAVSK--------LLAFCALSDSGS 67

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L YASL+F   P+P N++++NTLIRA+S S  PH ++ YF LM +     PD+ TF FA+
Sbjct: 68   LRYASLIFHQVPAP-NAYMYNTLIRAHSASSDPHLAMYYFQLMSKQIDLEPDNFTFHFAI 126

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
              C     I  G Q+HC V+KNGL +AD  VQTA++R Y++   L  A  +FDEIP RD 
Sbjct: 127  LGCVNCGWIGPGRQMHCLVVKNGLVAADAHVQTAVVRLYVECGVLGDAHKVFDEIPERDM 186

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            V  +V+MN Y+ RG   +AL++F +ML  G  PD   + T L AC+  GAL QG WIH++
Sbjct: 187  VQWNVIMNGYVKRGLASEALRVFQDMLVRGFEPDGFCVATGLAACAHLGALWQGKWIHEY 246

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            +   + +  D +I +AL++MYAKCG I  AVE F+ + +RN   WSAMIG + +HG A +
Sbjct: 247  VRKREGLNSDVFIGTALVDMYAKCGCIDLAVEAFEGMGKRNVVSWSAMIGAYGVHGYATE 306

Query: 291  AIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            AI CL RMQ  +G++ DGVV+           L+ +G  LL  M+++Y +VP+HEHYSC 
Sbjct: 307  AISCLERMQVDDGVKPDGVVLLGVLTACNHGGLLEKGKALLDNMKAKYGIVPKHEHYSCV 366

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            +D+LC+ GRL DA ELI +MPM+PLASVWG+LL+GCRI
Sbjct: 367  IDLLCKAGRLSDAFELIRRMPMKPLASVWGALLSGCRI 404


>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum tuberosum]
          Length = 512

 Score =  345 bits (885), Expect = 4e-92
 Identities = 190/398 (47%), Positives = 258/398 (64%), Gaps = 6/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            Q W+ C+S+ + C+ +  L++IHA+ IT G                  ++  C+L+N   
Sbjct: 18   QIWKWCMSMAEKCTNIGQLKAIHAIYITLGLHRNTYAVSK--------LLDFCALSNTGD 69

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLR-SPAAPPDHHTFPFA 832
            L YAS +F    +P N+F++N LIRAYS S QP  SL+YF LML+ S AA PD  TFPF 
Sbjct: 70   LSYASRIFAQVQTP-NTFLYNALIRAYSSSSQPQFSLNYFNLMLQTSNAAAPDSFTFPFL 128

Query: 831  LAACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRD 652
            + ACA  P    G QIH +V+KN  S+++  VQTALIRFY   + L+ A  +FDEI   D
Sbjct: 129  IIACANGPLEVEGKQIHSWVIKNSFSASNAHVQTALIRFYTNCKALDDARKVFDEITDID 188

Query: 651  PVHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHK 472
             +  +VLM+ +L  G   +AL +F +ML  G+ PD + +TTAL AC+Q GALEQG WIH+
Sbjct: 189  VIQCNVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIHE 248

Query: 471  HLLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAK 295
            H+   + +  D +I SAL++MYAKCG I  A EVF+S+P+RN   W+ MI GFA+HG  +
Sbjct: 249  HVTKSEWLEYDVFIGSALVDMYAKCGCINMASEVFESMPKRNKHSWATMIRGFAVHGRPE 308

Query: 294  DAIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSC 118
             AI CL RMQ  +G++ DGVVI           L +EG  LL +MES Y V P+HEH+SC
Sbjct: 309  LAISCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSC 368

Query: 117  AVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
             VD+LCR GRL+DA++LI +MPM+P ASVWG+LL+GCR
Sbjct: 369  VVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCR 406


>ref|XP_009795981.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Nicotiana sylvestris]
          Length = 515

 Score =  337 bits (863), Expect = 1e-89
 Identities = 187/398 (46%), Positives = 255/398 (64%), Gaps = 6/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            Q W+ C+S+ + C+    L++IHA+ IT G                  ++   +L+N   
Sbjct: 21   QLWRWCMSMAEKCTNSRQLKAIHAIYITLGLHRNTYAVSK--------LLDFSALSNSAD 72

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSP-AAPPDHHTFPFA 832
            L YAS +F    +P N+F++N LIRAYSRS QP  SL YF LML++  AA PD  TFPF 
Sbjct: 73   LSYASRIFAQVRTP-NTFLYNILIRAYSRSSQPQFSLHYFNLMLQTNNAAVPDSFTFPFL 131

Query: 831  LAACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRD 652
            L ACA  P    G Q+H +V+KN  S++D  VQTALIRFY   + L+ A  +FDEI   D
Sbjct: 132  LIACANGPLEVEGKQMHSWVVKNSFSASDAHVQTALIRFYTNCKALDDARKMFDEITDID 191

Query: 651  PVHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHK 472
             +  +VLM+ +L  G   + L +F +ML  G++ D + +TTAL+AC+  GALEQG WIH+
Sbjct: 192  VIQCNVLMSGHLQCGLAKETLSIFQDMLGRGVSADEYCVTTALSACAHLGALEQGKWIHE 251

Query: 471  HLLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAK 295
            H++  + +  D +I SAL++MYAKCG I  A EVF S+P RN   W+ MI GFA+HG  +
Sbjct: 252  HVMKSEWVESDVFIGSALVDMYAKCGCIHLASEVFDSMPTRNKHSWATMIRGFAVHGRPE 311

Query: 294  DAIECLSRMQ-QEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSC 118
             A+ CL RMQ  +G++ DG+VI           L +EG  LL KMES Y VVP+HEH+SC
Sbjct: 312  LALSCLERMQVVDGLKPDGIVILAALAACAHAGLQKEGEALLDKMESLYGVVPEHEHFSC 371

Query: 117  AVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
             VD+LCR GRL+DA++LI +MPM+P ASVWG+LL+GCR
Sbjct: 372  VVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCR 409


>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g28640 gi|9294278|dbj|BAB02180.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643948|gb|AEE77469.1| putative pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  334 bits (857), Expect = 7e-89
 Identities = 180/400 (45%), Positives = 248/400 (62%), Gaps = 8/400 (2%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNNLP- 1003
            QSW+  +   Q C+T+  ++S H+L I +G                +L+     L NL  
Sbjct: 9    QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAIS-------KLLTAFLHLPNLNK 61

Query: 1002 ---YASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAP--PDHHTFP 838
               YAS +F  S   PNSF+++T+IR  SRS QPH  L YFLLM++       P + TF 
Sbjct: 62   HFHYASSIF-DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFH 120

Query: 837  FALAACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPR 658
            F + AC      S G QIHC+V+KNG+  +D  VQT ++R Y++D+ L  A  +FDEIP+
Sbjct: 121  FLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQ 180

Query: 657  RDPVHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWI 478
             D V  DVLMN Y+  G   + L++F  ML  GL PD  ++TTALTAC+Q GAL QG WI
Sbjct: 181  PDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWI 240

Query: 477  HKHLLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGL 301
            H+ +     +  D ++ +AL++MYAKCG I  AVEVFK +  RN F W+A+IGG+A +G 
Sbjct: 241  HEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGY 300

Query: 300  AKDAIECLSRMQQE-GMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHY 124
            AK A+ CL R+++E G++ D VV+            + EG  +L  ME+RY + P+HEHY
Sbjct: 301  AKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY 360

Query: 123  SCAVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
            SC VD++CR GRL+DA+ LI KMPM+PLASVWG+LL GCR
Sbjct: 361  SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400


>ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g28660 gi|9294280|dbj|BAB02182.1| unnamed protein
            product [Arabidopsis thaliana] gi|20259531|gb|AAM13885.1|
            unknown protein [Arabidopsis thaliana]
            gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis
            thaliana] gi|332643950|gb|AEE77471.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  332 bits (852), Expect = 3e-88
 Identities = 181/403 (44%), Positives = 250/403 (62%), Gaps = 11/403 (2%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNNLP- 1003
            QSW+  +   Q C+T+  ++S H+L I +G                +L+     L NL  
Sbjct: 9    QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAIS-------KLLTAFLHLPNLNK 61

Query: 1002 ---YASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAP--PDHHTFP 838
               YAS +F  S   PNSF+++T+IR  SRS QPH  L YFLLM++       P + TF 
Sbjct: 62   HFHYASSIF-DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFH 120

Query: 837  FALAACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPR 658
            F + AC      S G QIHC+V+KNG+  +D  VQT ++R Y++D+ L  A  +FDEIP+
Sbjct: 121  FLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ 180

Query: 657  RDPVHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWI 478
             D V  DVLMN Y+  G   + L++F  ML  G+ PD  ++TTALTAC+Q GAL QG WI
Sbjct: 181  PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWI 240

Query: 477  HKHLLNDKKMR----DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAM 310
            H+ +   KK R    D ++ +AL++MYAKCG I  AVEVF+ +  RN F W+A+IGG+A 
Sbjct: 241  HEFV---KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297

Query: 309  HGLAKDAIECLSRMQQE-GMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQH 133
            +G AK A  CL R+++E G++ D VV+            + EG  +L  ME+RY + P+H
Sbjct: 298  YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKH 357

Query: 132  EHYSCAVDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
            EHYSC VD++CR GRL+DA++LI KMPM+PLASVWG+LL GCR
Sbjct: 358  EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400


>ref|XP_012483694.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640 [Gossypium raimondii]
            gi|763766418|gb|KJB33633.1| hypothetical protein
            B456_006G023300 [Gossypium raimondii]
          Length = 508

 Score =  327 bits (839), Expect = 8e-87
 Identities = 180/398 (45%), Positives = 246/398 (61%), Gaps = 5/398 (1%)
 Frame = -2

Query: 1179 QSWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNN--- 1009
            Q+W RCL+LL+HCS    ++ IHALLIT G                +LI +  SL+    
Sbjct: 10   QAWTRCLTLLKHCSKTAQIKPIHALLITQGLHQNPYIIS-------KLITSLTSLSTSLG 62

Query: 1008 LPYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
            L Y+SL+F    +P N +I+N LI+A+S SP P  S  YF L+L      PD  TF   L
Sbjct: 63   LHYSSLIFDQLQNP-NLYIYNALIKAHSNSPHPRTSFHYFNLLLNEETLRPDCQTFSSIL 121

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
             +CA   S+  G QI  +V KNG+ S+D +VQT +IR Y++ +    A  +FDEI   D 
Sbjct: 122  VSCAKTCSLISGKQIQNWVFKNGVFSSDSYVQTGVIRLYVETKLWGDARKVFDEITFVDV 181

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            V  +V+M+  +  G   +AL LF  ML  GL PD   +TTALTAC+Q+G L +G WIH++
Sbjct: 182  VKWNVVMSGLIRCGLGTQALGLFKEMLVDGLEPDEFCLTTALTACAQSGNLWEGRWIHEY 241

Query: 468  LLNDKKMR--DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAK 295
            +   K     D +  +AL++MYAKCG +  A+EVF+ + +RN F W+AMIGGFA+HG A 
Sbjct: 242  VKKRKNHLGLDVFTGTALVDMYAKCGCLDLAMEVFQGMTKRNVFSWAAMIGGFAVHGHAM 301

Query: 294  DAIECLSRMQQEGMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            +AI    +MQ  G++ DGVV+           L  EGL LL  ME +Y ++P+HEHYSC 
Sbjct: 302  EAIHYFEKMQTYGVRPDGVVLLSVLTACRHAGLAEEGLFLLNNMEHQYKIMPKHEHYSCV 361

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCRI 1
            VD+LCRVGR ++A++LI  MPM+PLASVWG+LL GCRI
Sbjct: 362  VDLLCRVGRFDEALKLIKLMPMKPLASVWGALLNGCRI 399


>gb|KFK33747.1| hypothetical protein AALP_AA5G054800 [Arabis alpina]
          Length = 499

 Score =  326 bits (836), Expect = 2e-86
 Identities = 176/397 (44%), Positives = 246/397 (61%), Gaps = 6/397 (1%)
 Frame = -2

Query: 1176 SWQRCLSLLQHCSTLHHLQSIHALLITNGXXXXXXXXXXXXXXXSRLIVTACSLNNL--- 1006
            SW+  +     C+TLHH++S HAL I +G                +L+     L NL   
Sbjct: 5    SWKTLILASHRCTTLHHIKSTHALFIIHGLNHNTYATS-------KLLTAFLPLPNLNKH 57

Query: 1005 -PYASLLFRHSPSPPNSFIFNTLIRAYSRSPQPHHSLSYFLLMLRSPAAPPDHHTFPFAL 829
              YA+ +F  S    NSF+++T+IR  SRS  P   L YF LM++     P + TF F L
Sbjct: 58   FQYAATIF-DSIQSRNSFVYDTMIRICSRSSLPQMGLRYFKLMVKEEDVAPSYLTFHFLL 116

Query: 828  AACAAIPSISFGSQIHCFVLKNGLSSADPFVQTALIRFYMQDENLNQACNLFDEIPRRDP 649
              C      + G QIHC+VLKNG+ S+D +VQT ++R Y++++ L  A  +FDEIP  D 
Sbjct: 117  VVCLNGCLFTVGKQIHCWVLKNGVFSSDGYVQTGVLRIYVEEKVLLDARKVFDEIPHPDV 176

Query: 648  VHLDVLMNAYLHRGSPDKALQLFGNMLQVGLTPDSHAITTALTACSQAGALEQGVWIHKH 469
            V  DVL+N Y+  G   + L++F  ML  G+ PD  ++TTALTAC+Q GAL QG WIH+ 
Sbjct: 177  VKWDVLINGYVRCGLGFEGLEVFKEMLVRGIEPDKFSVTTALTACAQVGALAQGKWIHEV 236

Query: 468  LLNDKKMR-DTYIASALINMYAKCGSIGEAVEVFKSVPERNTFMWSAMIGGFAMHGLAKD 292
            L   K +  D Y+ + L++MYAKCG I  A+EVF+ +  RN F W+A+IGG+A +G A++
Sbjct: 237  LKKKKWIESDVYVGTTLVDMYAKCGWIEMAMEVFEKLTRRNVFSWAALIGGYAAYGYARE 296

Query: 291  AIECLSRMQQE-GMQVDGVVIXXXXXXXXXXXLVREGLLLLAKMESRYCVVPQHEHYSCA 115
            AI CL RM++E  ++ D VV+           L++EG  +L  ME+RY + P+HEHYSC 
Sbjct: 297  AITCLERMEREDDIKPDSVVLLAVLAACAHGGLLQEGRSMLDTMEARYGITPKHEHYSCI 356

Query: 114  VDMLCRVGRLEDAVELICKMPMRPLASVWGSLLAGCR 4
            VD++CR GRL+DAV +I KMPM+PLASVWG+LL GCR
Sbjct: 357  VDLMCRAGRLDDAVGVIEKMPMKPLASVWGALLNGCR 393