BLASTX nr result
ID: Anemarrhena21_contig00023213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00023213
(1151 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010230190.1| PREDICTED: glycine-rich RNA-binding protein ... 73 6e-12
gb|EMS55801.1| Cold-inducible RNA-binding protein [Triticum urartu] 77 2e-11
ref|XP_009126650.1| PREDICTED: cold-inducible RNA-binding protei... 75 9e-11
emb|CDY09244.1| BnaA02g06700D [Brassica napus] 75 9e-11
gb|KFK27526.1| hypothetical protein AALP_AA8G394900 [Arabis alpina] 74 2e-10
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab... 74 2e-10
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi... 74 2e-10
ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Caps... 74 3e-10
ref|XP_010426030.1| PREDICTED: cold-inducible RNA-binding protei... 73 3e-10
ref|XP_006418974.1| hypothetical protein EUTSA_v10002983mg, part... 73 5e-10
ref|XP_004294595.1| PREDICTED: glycine-rich RNA-binding protein ... 72 6e-10
ref|XP_010503216.1| PREDICTED: cold-inducible RNA-binding protei... 72 8e-10
gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum] 72 1e-09
ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus no... 71 1e-09
ref|XP_008357602.1| PREDICTED: glycine-rich RNA-binding protein ... 71 1e-09
ref|XP_010033152.1| PREDICTED: cold-inducible RNA-binding protei... 71 1e-09
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei... 71 1e-09
gb|KJB55728.1| hypothetical protein B456_009G091800 [Gossypium r... 71 2e-09
ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protei... 71 2e-09
ref|XP_010455682.1| PREDICTED: cold-inducible RNA-binding protei... 70 3e-09
>ref|XP_010230190.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Brachypodium distachyon]
Length = 81
Score = 73.2 bits (178), Expect(2) = 6e-12
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -3
Query: 447 LFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGKSTSLK 295
+FSPFG I++ RL+RD +T RPKGF F+ YSSE EAQKAVKAMDG+ LK
Sbjct: 24 VFSPFGVIEEARLVRDNQTGRPKGFGFVKYSSEVEAQKAVKAMDGREVVLK 74
Score = 26.2 bits (56), Expect(2) = 6e-12
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 514 LRVVLLFYYLGLSFYTTE-ELKKAFFTF 434
++ + + +++GLSFYTT+ ELK F F
Sbjct: 1 MKYLSIQFFVGLSFYTTKVELKDVFSPF 28
>gb|EMS55801.1| Cold-inducible RNA-binding protein [Triticum urartu]
Length = 207
Score = 77.0 bits (188), Expect = 2e-11
Identities = 40/90 (44%), Positives = 55/90 (61%)
Frame = -3
Query: 555 ILYFYIWGNQKLFNCXXXXXXXXXXYHFTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKG 376
+L+ Y WG C +T + +++FSPFG I++VRL+RD +T R KG
Sbjct: 89 VLFAYDWG------CLGVDGLSTGLSFYTTEEEFKKVFSPFGAIEEVRLVRDNQTGRLKG 142
Query: 375 FAFIDYSSEEEAQKAVKAMDGKSTSLKHAN 286
F F+ YSS+EEAQKA+KAMDG+S K N
Sbjct: 143 FGFVRYSSQEEAQKAIKAMDGRSFVAKTDN 172
>ref|XP_009126650.1| PREDICTED: cold-inducible RNA-binding protein [Brassica rapa]
Length = 110
Score = 75.1 bits (183), Expect = 9e-11
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK+ RLI+D +TQRPKGF F+ + SE++AQKA+KA+DGK
Sbjct: 17 YTTDQSLRQLFSPFGQIKEARLIKDSQTQRPKGFGFVTFESEDDAQKAMKALDGK 71
>emb|CDY09244.1| BnaA02g06700D [Brassica napus]
Length = 104
Score = 75.1 bits (183), Expect = 9e-11
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK+ RLI+D +TQRPKGF F+ + SE++AQKA+KA+DGK
Sbjct: 17 YTTDQSLRQLFSPFGQIKEARLIKDSQTQRPKGFGFVTFESEDDAQKAMKALDGK 71
>gb|KFK27526.1| hypothetical protein AALP_AA8G394900 [Arabis alpina]
Length = 98
Score = 73.9 bits (180), Expect = 2e-10
Identities = 34/55 (61%), Positives = 45/55 (81%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG I Q RLIRD +TQRPKGF F+ + SE++AQKA+KA+DGK
Sbjct: 17 YTTDESLRQLFSPFGLITQARLIRDSRTQRPKGFGFVTFESEDDAQKALKALDGK 71
>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
Length = 102
Score = 73.9 bits (180), Expect = 2e-10
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK+ RLIRD +TQRPKGF FI + SE++A+KA+K++DGK
Sbjct: 17 YTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALKSLDGK 71
>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like
[Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 73.9 bits (180), Expect = 2e-10
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK+ RLIRD +TQRPKGF FI + SE++A+KA+K++DGK
Sbjct: 17 YTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSLDGK 71
>ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Capsella rubella]
gi|482560811|gb|EOA25002.1| hypothetical protein
CARUB_v10018300mg [Capsella rubella]
Length = 100
Score = 73.6 bits (179), Expect = 3e-10
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = -3
Query: 453 RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
R+LFS FG IK+ RLIRD KTQRPKGF FI Y SE++A+KA+K++DGK
Sbjct: 24 RQLFSQFGQIKEARLIRDSKTQRPKGFGFITYESEDDARKAMKSLDGK 71
>ref|XP_010426030.1| PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 119
Score = 73.2 bits (178), Expect = 3e-10
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK+ RLIRD +TQRPKGF FI + SE++A+KA+K++DGK
Sbjct: 17 YTTDQSLRQLFSPFGQIKEARLIRDPETQRPKGFGFITFESEDDARKALKSLDGK 71
>ref|XP_006418974.1| hypothetical protein EUTSA_v10002983mg, partial [Eutrema
salsugineum] gi|557096902|gb|ESQ37410.1| hypothetical
protein EUTSA_v10002983mg, partial [Eutrema salsugineum]
Length = 71
Score = 72.8 bits (177), Expect = 5e-10
Identities = 32/55 (58%), Positives = 45/55 (81%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK RLIRD +TQRPKGF F+ + SE++AQKA+K++DG+
Sbjct: 17 YTTDRSLRQLFSPFGQIKDARLIRDPETQRPKGFGFVTFESEDDAQKALKSLDGR 71
>ref|XP_004294595.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Fragaria vesca subsp. vesca]
Length = 91
Score = 72.4 bits (176), Expect = 6e-10
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
FT + R++FSPFGD+ + RL+ D TQRPKGF F+ Y SE EAQKA+K MDG+
Sbjct: 17 FTSKEKLRQMFSPFGDVTEARLVIDPNTQRPKGFGFVTYKSEVEAQKAIKVMDGR 71
>ref|XP_010503216.1| PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 102
Score = 72.0 bits (175), Expect = 8e-10
Identities = 32/55 (58%), Positives = 46/55 (83%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG IK+ RLIRD +TQRPKGF FI + SE++A+KA+K++DG+
Sbjct: 17 YTTDQSLRQLFSPFGQIKEARLIRDPETQRPKGFGFITFESEDDARKALKSLDGR 71
>gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]
Length = 94
Score = 71.6 bits (174), Expect = 1e-09
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
FT + + LF+PFG +K+ RLIRD KTQRPKGF F+ + +E EAQKA+KAM+G+
Sbjct: 17 FTNHQELKTLFAPFGVVKEARLIRDSKTQRPKGFGFVTFETEAEAQKALKAMNGR 71
>ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus notabilis]
gi|587948820|gb|EXC35053.1| Cold-inducible RNA-binding
protein [Morus notabilis]
Length = 94
Score = 71.2 bits (173), Expect = 1e-09
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ ++LFSPFG++ + RL+ D KTQRPKGF F+ Y SE EAQKA+KAM+G+
Sbjct: 17 YTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVEAQKALKAMNGR 71
>ref|XP_008357602.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Malus domestica]
Length = 94
Score = 71.2 bits (173), Expect = 1e-09
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
FT + R+LFSPFG++ + RLI D +T RPKGF F+ Y S+ EAQKA+KAMDG+
Sbjct: 17 FTSSEQLRKLFSPFGNVTEARLIMDRRTDRPKGFGFVTYQSDVEAQKALKAMDGR 71
>ref|XP_010033152.1| PREDICTED: cold-inducible RNA-binding protein [Eucalyptus grandis]
gi|629086344|gb|KCW52701.1| hypothetical protein
EUGRSUZ_J02066 [Eucalyptus grandis]
Length = 103
Score = 71.2 bits (173), Expect = 1e-09
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T + RRLFSPFG IK+VRL++D TQRPKGF F+ Y SE EA +A+KA++G+
Sbjct: 17 YTTEEGLRRLFSPFGSIKEVRLVKDPSTQRPKGFGFVAYESEVEADRALKALNGR 71
>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B [Cucumis sativus]
gi|700196541|gb|KGN51718.1| Cold-inducible RNA binding
protein [Cucumis sativus]
Length = 89
Score = 71.2 bits (173), Expect = 1e-09
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T L+ + LFSPFG I + RLIRD KT+RPKGF F+ + S EA+KA+KAMDG+
Sbjct: 17 YTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKAMDGR 71
>gb|KJB55728.1| hypothetical protein B456_009G091800 [Gossypium raimondii]
Length = 102
Score = 70.9 bits (172), Expect = 2e-09
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
FT + + LF+PFG +K+ RLIRD KTQRPKGF F+ + +E EAQKA+KAM+G+
Sbjct: 17 FTNHQELKTLFAPFGVVKEARLIRDPKTQRPKGFGFVTFETEAEAQKALKAMNGR 71
>ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protein-like [Gossypium
raimondii] gi|763788731|gb|KJB55727.1| hypothetical
protein B456_009G091800 [Gossypium raimondii]
gi|763788733|gb|KJB55729.1| hypothetical protein
B456_009G091800 [Gossypium raimondii]
gi|763788734|gb|KJB55730.1| hypothetical protein
B456_009G091800 [Gossypium raimondii]
Length = 94
Score = 70.9 bits (172), Expect = 2e-09
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
FT + + LF+PFG +K+ RLIRD KTQRPKGF F+ + +E EAQKA+KAM+G+
Sbjct: 17 FTNHQELKTLFAPFGVVKEARLIRDPKTQRPKGFGFVTFETEAEAQKALKAMNGR 71
>ref|XP_010455682.1| PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 116
Score = 70.1 bits (170), Expect = 3e-09
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = -3
Query: 474 FTRLKN*RRLFSPFGDIKQVRLIRDGKTQRPKGFAFIDYSSEEEAQKAVKAMDGK 310
+T ++ R+LFSPFG I + RLIRD TQRPKGF F+ + SE++AQKA+KA++GK
Sbjct: 35 YTTDQSLRQLFSPFGQITEARLIRDQLTQRPKGFGFVTFKSEDDAQKALKALNGK 89