BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00022863
         (1117 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   574   e-161
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   474   e-131
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   418   e-114
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   418   e-114
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     417   e-114
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     415   e-113
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     407   e-111
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]   394   e-107
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   392   e-106
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   392   e-106
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   392   e-106
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   392   e-106
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   392   e-106
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           391   e-106
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   390   e-105
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     387   e-104
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   386   e-104
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...   384   e-104
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]        381   e-103
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...   380   e-102

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  574 bits (1479), Expect = e-161
 Identities = 289/384 (75%), Positives = 322/384 (83%), Gaps = 12/384 (3%)
 Frame = +1

Query: 1    QVEQQVIQDENEFPQEEENQYXXXXXXXXXXXXXXGIMHSLARDRPMRSNFGKPPNRYGF 180
            QVE QVIQ+E++  + EE                  I  S+A+DRP R    +PP RYGF
Sbjct: 714  QVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGV-RPPTRYGF 772

Query: 181  EDMVAYALQVAEEVDTFEPSTYKEA------------MGDEMESLHKNNTWDLVQRPPER 324
            EDMV YALQVAEEVDT EPSTYKEA            MGDEMESLHKN TWDLV +P  R
Sbjct: 773  EDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGR 832

Query: 325  KIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIV 504
            KIITCKW+FKKKEG+SPAEGVKYKAR+VARG  Q+EGVDYNEIFSPVVRHTSIRVLLAIV
Sbjct: 833  KIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIV 892

Query: 505  AHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWY 684
            AHQNLELEQLDVKTAFLHGELEE IYMTQPDGFQVPGKE+HVCKLKKSLYGLKQSPRQWY
Sbjct: 893  AHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWY 952

Query: 685  KRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSA 864
            KRFDSYM+++GY RS YDCCVY+++L + S+IYLVLYVDDMLIAA+ K DIQKLKGLLSA
Sbjct: 953  KRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSA 1012

Query: 865  EFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHL 1044
            EFEMKDLGAARKILGMEI RDR ++KLFLSQ+ YIQK+L+RFGMS++KPIDTPSAANIHL
Sbjct: 1013 EFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHL 1072

Query: 1045 STAFAPKSDEEKEYMSRVPYANAV 1116
            +  FAP+S+EEKEYMSRVPYA+AV
Sbjct: 1073 TAMFAPQSEEEKEYMSRVPYASAV 1096


>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  474 bits (1221), Expect = e-131
 Identities = 231/324 (71%), Positives = 273/324 (84%), Gaps = 12/324 (3%)
 Frame = +1

Query: 181  EDMVAYALQVAEEVDTFEPSTYKEA------------MGDEMESLHKNNTWDLVQRPPER 324
            E+M+ YAL VAE++++ EP +YKEA            M +EMESLHKN TW+LV+ P  R
Sbjct: 886  EEMIGYALHVAEDIESPEPMSYKEAVSSNESAKWLVAMSEEMESLHKNQTWELVRIPQGR 945

Query: 325  KIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIV 504
            K++ CKW+FK+KEG S  E V+YKARLVA+G  Q+EGVDYNEIFSPVVRHTSIRVLLA+V
Sbjct: 946  KVVGCKWVFKRKEGTSEGESVRYKARLVAKGFSQREGVDYNEIFSPVVRHTSIRVLLAMV 1005

Query: 505  AHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWY 684
            AH +LELEQLDVKTAFLHGELEE I M+QP+GF VPGKE   C LKKSLYGLKQSPRQWY
Sbjct: 1006 AHFDLELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKEKFACSLKKSLYGLKQSPRQWY 1065

Query: 685  KRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSA 864
            KRFDS+M++ G++RSPYDCCVYHSK+++GSYIYL+LYVDDMLIAA+ KSD+ KLK LLS+
Sbjct: 1066 KRFDSFMVEHGFDRSPYDCCVYHSKVEDGSYIYLLLYVDDMLIAAKKKSDVLKLKKLLSS 1125

Query: 865  EFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHL 1044
            EF+MKDLGAA+KILGMEIYRD  +KKLFLSQK YI K+L RFGMSTAK IDTP+AAN  L
Sbjct: 1126 EFDMKDLGAAKKILGMEIYRDHGRKKLFLSQKSYILKVLDRFGMSTAKSIDTPAAANARL 1185

Query: 1045 STAFAPKSDEEKEYMSRVPYANAV 1116
            S   +P+SDEEKEYMS+VPYA+AV
Sbjct: 1186 SVVLSPQSDEEKEYMSKVPYASAV 1209


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  418 bits (1074), Expect = e-114
 Identities = 217/347 (62%), Positives = 271/347 (78%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVD-TFEPSTYKEA------------ 255
            S+A+D+P R+   KPP RY  E ++VAYAL VAEE++   EPS Y EA            
Sbjct: 519  SIAKDKPKRNI--KPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITT 576

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M DEMESL KN+TW+LV+ P E+K I CKWIFK+KEGMSP++  +YKARLVA+G  Q   
Sbjct: 577  MHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPS 636

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            +D+N++FSP+V+H+SIR LL+IVA  + ELEQ+DVKTAFLHGELEE IYM QP+GF VPG
Sbjct: 637  IDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 696

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ VC+LKKSLYGLKQSPRQWYKRFDS+M+   + RS YD CVY  K+ +GS IYL+LY
Sbjct: 697  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVY-LKVVDGSAIYLLLY 755

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++KS+I+KLK  LS+EFEMKDLGAA+KILGMEI R+R+  KL+LSQKGYI+K
Sbjct: 756  VDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEK 815

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M  AKP+ TP AA+   S+   P+SD + EYMSRVPY++AV
Sbjct: 816  VLRRFNMHDAKPVSTPLAAHFRSSSDLCPQSDYDIEYMSRVPYSSAV 862


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  418 bits (1074), Expect = e-114
 Identities = 219/347 (63%), Positives = 270/347 (77%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVD-TFEPSTYKEA------------ 255
            S+A+DRP R+   KPP RY  E ++VAYAL VAEE++   EPSTY EA            
Sbjct: 984  SIAKDRPKRNI--KPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITA 1041

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M DEMESL KN+TW+LV+ P E+K I CKWIFK+KEG+S ++  +YKARL+A+G  Q  G
Sbjct: 1042 MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPG 1101

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            +D+N++FSPVV+H+SIR LL+IVA  + ELEQ+DVKTAFLHGELEE IYM QP GF VPG
Sbjct: 1102 IDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPG 1161

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ VC+LKKSLYGLKQSPRQWYKRFDS+M+   + RS YD CVY  K+ +GS IYL+LY
Sbjct: 1162 KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLY 1220

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++KS+I KLK  LS+EFEMKDLGAA+KILGMEI R R+  KL+LSQKGYI+K
Sbjct: 1221 VDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEK 1280

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M  AKP+ TP AA+  LS+   P+SD + EYMSRVPY++AV
Sbjct: 1281 VLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAV 1327


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  417 bits (1072), Expect = e-114
 Identities = 218/347 (62%), Positives = 270/347 (77%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVD-TFEPSTYKEA------------ 255
            S+A+D+P R+   KPP RY  E  +VAYAL VAE+++   EPSTY EA            
Sbjct: 749  SIAKDKPKRNI--KPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITA 806

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M DEMESL KN+TW+LV+ P E+K I CKWIFK+KEGMSP++  +YKARLVA+G  Q  G
Sbjct: 807  MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 866

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            +D+N++FSPVV+H+SIR LL IVA  + ELEQ++VKTAFLHGELEE IYM QP+GF VPG
Sbjct: 867  IDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPG 926

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ VC+LKKSLYGLKQSPRQWYKRFDS+M+   +  S YD CVY  K+ +GS IYL+LY
Sbjct: 927  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVY-LKVVDGSVIYLLLY 985

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++KS+I+KLK  LS+EFEMKDLGAA+KILGMEI R+R+  KL+LSQKGYI+K
Sbjct: 986  VDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEK 1045

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M  AKP+ TP AA+  LS+   P SD + EYMSRVPY++AV
Sbjct: 1046 VLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAV 1092


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  415 bits (1067), Expect = e-113
 Identities = 217/347 (62%), Positives = 270/347 (77%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVD-TFEPSTYKEA------------ 255
            S+A+D+P R+   KPP RY  E ++VAYAL VAEE++   EPSTY EA            
Sbjct: 656  SIAKDKPKRNI--KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITA 713

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M DEMESL KN+TW+LV+ P E+K I CKWIFK+K+GMSP++  +YKARLVA+G  Q  G
Sbjct: 714  MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQIPG 773

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            +D+N++FSPV++H+SIR LL+IVA  + ELEQ+DVKTAFLHGELEE IYM QP+GF VPG
Sbjct: 774  IDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 833

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ V +LKKSLYGLKQSPRQWYKRFDS+M    + RS YD CVY  K+ +GS IYL+LY
Sbjct: 834  KENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVY-LKVVDGSSIYLLLY 892

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++KS+I+KLK  LS+EFEMKDLGAA+KILGMEI R+R+  KL+LSQKGYI+K
Sbjct: 893  VDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEK 952

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M  AKP+ TP AA+  LS+   P+SD + EYMSRVPY + V
Sbjct: 953  VLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVV 999


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  407 bits (1047), Expect = e-111
 Identities = 215/347 (61%), Positives = 268/347 (77%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVD-TFEPSTYKEA------------ 255
            S+A+DRP R+   KPP RY  E ++VAYAL VAEE++   EPSTY +A            
Sbjct: 686  SIAKDRPKRNT--KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITA 743

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M DEMESL KN++W+L + P E+K I CKWIFK+KEGMSP++  +YKARLVA+G  Q  G
Sbjct: 744  MHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 803

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            +D+N++FSPVV+H+SIR LL+IVA  + ELEQ+DVKTAFLHGELEE IYM QP+GF VPG
Sbjct: 804  IDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 863

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ VC+LKKSLYGLKQSPRQWYKRFDS+M+   + RS YD CVY  K+ +GS IYL+LY
Sbjct: 864  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLY 922

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++KS+I KLK  LS+EFEMKDLGAA+KILGMEI R+R+  KL+LSQK YI+K
Sbjct: 923  VDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEK 982

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M  AK + T  AA+  LS+   P+S  + EYMSRVPY++AV
Sbjct: 983  VLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAV 1029


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score =  394 bits (1012), Expect = e-107
 Identities = 194/343 (56%), Positives = 259/343 (75%), Gaps = 9/343 (2%)
 Frame = +1

Query: 115  HSLARDRPMRSNFGKPPNRYGFEDMVAYALQVA--------EEVDTFEPSTYKEAMGDEM 270
            HS+A D+P R+   KPP RYGFED+V+YAL  +        E +   E S +  AM +E+
Sbjct: 127  HSIAIDKPRRTI--KPPTRYGFEDLVSYALITSSKDPITFQEAIHNQEKSRWMGAMVEEI 184

Query: 271  ESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNE 450
            + LHKN TWDLV+ P  ++ I CKW++KKKE +S  EG K+KARLVA+G  Q++GVDY+E
Sbjct: 185  QFLHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGEKFKARLVAKGYSQRKGVDYDE 244

Query: 451  IFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHV 630
            IFSP+VRHTSIR +L +VAH +++LEQ+DV+T FLHG+LEE +YM QP+GF  PG+E  V
Sbjct: 245  IFSPMVRHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDLEELVYMVQPEGFIQPGQEHLV 304

Query: 631  CKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKL-KNGSYIYLVLYVDDM 807
            CKL+KSLYGLKQSPRQWYK FDSY+I+IGY R  YDC VY   L  + S+I+L+LYVDDM
Sbjct: 305  CKLRKSLYGLKQSPRQWYKCFDSYIIRIGYKRCEYDCFVYVKSLDDDSSFIFLLLYVDDM 364

Query: 808  LIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSR 987
            LIAA++  ++ KLK LLS EF+MK+L AA+KI+GMEI+RDR  ++L+LSQ  Y++++  R
Sbjct: 365  LIAAKSMVEVNKLKSLLSKEFDMKELDAAKKIIGMEIHRDRASRRLWLSQYSYVKRVFER 424

Query: 988  FGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            F M  AKP+ TP A +  LST   PK+++E + MS+VPYA+AV
Sbjct: 425  FNMDDAKPVSTPLANHFRLSTNQCPKTBDEVKDMSKVPYASAV 467


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  392 bits (1008), Expect = e-106
 Identities = 210/347 (60%), Positives = 260/347 (74%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVD-TFEPSTYKEA------------ 255
            S+A+D+P R+   KPP RY  E ++VAYAL VAEE++   EPSTY EA            
Sbjct: 812  SIAKDKPKRNI--KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITA 869

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M DEMESL KN+TW+ V+ P E+K I CKWIFK+KEGMSP++  +YKARLVA+G  Q  G
Sbjct: 870  MHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 929

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            +D+N++FSP+++H+SIR LL IVA  + ELEQ+DVKTAFLHGELEE IYM QP+GF V G
Sbjct: 930  IDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLG 989

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ VC+LKKSLYGLKQSPRQWYKRFDS+M+   + RS YD CVY  K+ +GS IYL+LY
Sbjct: 990  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLY 1048

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++KS+I KLK  LS+EF MKDLGAA+KILGMEI R+R+  KL+LSQKGYI+K
Sbjct: 1049 VDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHSGKLYLSQKGYIKK 1108

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M   KPI               P+SD + EYMSRVPY++AV
Sbjct: 1109 VLRRFNMHDVKPI----------IFRLCPQSDYDIEYMSRVPYSSAV 1145


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  392 bits (1007), Expect = e-106
 Identities = 208/334 (62%), Positives = 250/334 (74%), Gaps = 14/334 (4%)
 Frame = +1

Query: 157  KPPNRYGFE-DMVAYALQVAEEVDTF-EPSTYKEA------------MGDEMESLHKNNT 294
            KPP R   E ++  YAL  AE+V+   EP+TYKEA            M +EM+SL KN+T
Sbjct: 789  KPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNST 848

Query: 295  WDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRH 474
            W++V  P ++K I+CKWIFK+KEG+S +E  KYKARLVARG  Q  GVDYN++FSPVV+H
Sbjct: 849  WEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKH 908

Query: 475  TSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLY 654
            +SIR  L+IVA  +LELEQLDVKTAFLHGELEE IYM QP+GF VPGKE +VCKLK+SLY
Sbjct: 909  SSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLY 968

Query: 655  GLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSD 834
            GLKQSPRQW KRFDS+M+   + RS YD CVY  K  NGS IYL+LYVDDMLIAA++K +
Sbjct: 969  GLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIE 1027

Query: 835  IQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPI 1014
            I KLK LLS+EF+MKDLG+A+KILGMEI RDR    LFLSQ  YI+K+L RF M  AK +
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1087

Query: 1015 DTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
             TP A +  LS A  P  D E EYMSRVPY++AV
Sbjct: 1088 STPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAV 1121


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  392 bits (1007), Expect = e-106
 Identities = 208/334 (62%), Positives = 250/334 (74%), Gaps = 14/334 (4%)
 Frame = +1

Query: 157  KPPNRYGFE-DMVAYALQVAEEVDTF-EPSTYKEA------------MGDEMESLHKNNT 294
            KPP R   E ++  YAL  AE+V+   EP+TYKEA            M +EM+SL KN+T
Sbjct: 789  KPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNST 848

Query: 295  WDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRH 474
            W++V  P ++K I+CKWIFK+KEG+S +E  KYKARLVARG  Q  GVDYN++FSPVV+H
Sbjct: 849  WEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKH 908

Query: 475  TSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLY 654
            +SIR  L+IVA  +LELEQLDVKTAFLHGELEE IYM QP+GF VPGKE +VCKLK+SLY
Sbjct: 909  SSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLY 968

Query: 655  GLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSD 834
            GLKQSPRQW KRFDS+M+   + RS YD CVY  K  NGS IYL+LYVDDMLIAA++K +
Sbjct: 969  GLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIE 1027

Query: 835  IQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPI 1014
            I KLK LLS+EF+MKDLG+A+KILGMEI RDR    LFLSQ  YI+K+L RF M  AK +
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1087

Query: 1015 DTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
             TP A +  LS A  P  D E EYMSRVPY++AV
Sbjct: 1088 STPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAV 1121


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  392 bits (1007), Expect = e-106
 Identities = 201/324 (62%), Positives = 244/324 (75%), Gaps = 13/324 (4%)
 Frame = +1

Query: 184  DMVAYALQVAEEVD-TFEPSTYKEAM--GD----------EMESLHKNNTWDLVQRPPER 324
            DMV YA   AE+V+ T EP+TY EA+  GD          EM+SL KN TW+LV  P ++
Sbjct: 788  DMVYYAFSYAEQVENTLEPATYTEAVVSGDREKWISAIQEEMQSLEKNGTWELVHLPKQK 847

Query: 325  KIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIV 504
            K + CKWIFK+KEG+SP+E  ++K RLVA+G  Q  GVDYN++FSPVV+H+SIR   +IV
Sbjct: 848  KPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIV 907

Query: 505  AHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWY 684
               +LELEQLDVKT FLHGELEE IYM QP+GF VPGKED+VCKLK+SLYGLKQSPRQWY
Sbjct: 908  TMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 967

Query: 685  KRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSA 864
            KRFDS+M+  G+ RS +D CVY  K  NGS IYL+LYVDDMLIAA++K  I  LK  LS+
Sbjct: 968  KRFDSFMLSHGFKRSEFDSCVY-IKFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSS 1026

Query: 865  EFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHL 1044
            EF+MKDLGAA+KILGMEI RDRN   LFLSQ+ YI+K+L RF M  AKP+ TP A +  L
Sbjct: 1027 EFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKL 1086

Query: 1045 STAFAPKSDEEKEYMSRVPYANAV 1116
            S      +DE+ EYMSRVPY++AV
Sbjct: 1087 SALQCASTDEDVEYMSRVPYSSAV 1110


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  392 bits (1006), Expect = e-106
 Identities = 200/324 (61%), Positives = 245/324 (75%), Gaps = 13/324 (4%)
 Frame = +1

Query: 184  DMVAYALQVAEEVD-TFEPSTYKEA------------MGDEMESLHKNNTWDLVQRPPER 324
            DMV YA   AE+V+ T EP+TY EA            M +EM+SL KN TW+LV  P ++
Sbjct: 788  DMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQSLEKNGTWELVHLPKQK 847

Query: 325  KIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIV 504
            K + CKWIFK+KEG+SP+E  ++KARLVA+G  Q  GVDYN++FSPVV+H+SIR   +IV
Sbjct: 848  KPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIV 907

Query: 505  AHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWY 684
            A  +LELEQLDVKTAFLHGELEE IYM QP+GF VPGKED+VCKLK+SLYGLKQSPRQWY
Sbjct: 908  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 967

Query: 685  KRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSA 864
            KRFDS+M+  G+ RS +D CVY  K  NGS IYL+LYVDD+LIAA++K  I  LK  LS+
Sbjct: 968  KRFDSFMLSHGFKRSEFDSCVY-IKFVNGSPIYLLLYVDDILIAAKSKEQITTLKKQLSS 1026

Query: 865  EFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHL 1044
            EF+MKDLGAA+KILGMEI RD+N   LFLSQ+ YI+K+L  F M  AKP+ TP A +  L
Sbjct: 1027 EFDMKDLGAAKKILGMEITRDKNSGLLFLSQQSYIKKVLQCFNMHDAKPVSTPIAPHFKL 1086

Query: 1045 STAFAPKSDEEKEYMSRVPYANAV 1116
            S      +DE+ EYMSRVPY++AV
Sbjct: 1087 SALQCANTDEDVEYMSRVPYSSAV 1110


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  391 bits (1004), Expect = e-106
 Identities = 210/347 (60%), Positives = 257/347 (74%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVDTF-EPSTYKEA------------ 255
            S+A+ +  R+   KPP R   E ++  YAL  AE+V+   EP+TYKEA            
Sbjct: 780  SIAQRKSKRTT--KPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISA 837

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M +EM+SL KN+TW++V  P ++K I+CKWIFK+KE +S +E  KYKARLVARG  Q  G
Sbjct: 838  MHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSEPPKYKARLVARGYSQIPG 897

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            VDYN++FSPVV+H+SIR  L+IVA  +LELEQLDVKTAFLHGELEE IYM QP+GF VPG
Sbjct: 898  VDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPG 957

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE +VCKLK+SLYGLKQSPRQW KRFDS+M+   + RS YD CVY  K  NGS IYL+LY
Sbjct: 958  KEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLY 1016

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIAA++K +I KLK LLS+EF+MKDLG+A+KILGMEI RDR    LFLSQ  YI+K
Sbjct: 1017 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1076

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M  AK + TP A +  LS A  P +D E EYMSRVPY++AV
Sbjct: 1077 VLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAV 1123


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  390 bits (1001), Expect = e-105
 Identities = 207/334 (61%), Positives = 250/334 (74%), Gaps = 14/334 (4%)
 Frame = +1

Query: 157  KPPNRYGFE-DMVAYALQVAEEVDTF-EPSTYKEA------------MGDEMESLHKNNT 294
            KPP R   E ++  YAL  AE+V+   EP+TYKEA            M +EM+SL KN+T
Sbjct: 789  KPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNST 848

Query: 295  WDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRH 474
            W++V  P ++K I+CKWIFK+KEG+S +E  KYKARLVARG  Q  GVDYN++FSPVV+H
Sbjct: 849  WEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKH 908

Query: 475  TSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLY 654
            +SIR  L+IVA  +LELEQLDVKTAFLHGELEE IYM QP+GF VPGKE +VCKLK+SLY
Sbjct: 909  SSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLY 968

Query: 655  GLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSD 834
            GLKQSPRQW KRFDS+M+   + RS YD CVY  K  NGS IYL+LYVDDMLIAA++K +
Sbjct: 969  GLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIE 1027

Query: 835  IQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPI 1014
            I KLK LLS+EF+MKDLG+A+KIL MEI RDR    LFLSQ  YI+K+L RF M  AK +
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1087

Query: 1015 DTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
             TP A +  LS A  P +D E EYMSRVPY++AV
Sbjct: 1088 STPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAV 1121


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  387 bits (993), Expect = e-104
 Identities = 197/347 (56%), Positives = 255/347 (73%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE--DMVAYALQVAEEVDTFEPSTYKEA------------ 255
            S+A D+P R+   KP  R+GFE  + V+ AL +++     +P+TY++A            
Sbjct: 747  SIALDKPKRNR--KPIQRFGFEPEEDVSRALSISQG----DPTTYEDAIESVESAGWIGA 800

Query: 256  MGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
            M +EMESLHKN+ W+LV +P ERK++ CKW+F+KKEG+   + + YKARLVA+G  QKEG
Sbjct: 801  MTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEG 860

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            VDY+EIFSPVV+HTSIR+LL+I A  ++E+EQ+DVKTAFLHG+LEE IYM+QP+GF   G
Sbjct: 861  VDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETG 920

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+ VC+LKKSLYGLKQSPRQWYK FD+YM++IGY R  YDCCVY+   ++G  I L+LY
Sbjct: 921  KENLVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLY 980

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDMLIA  +   IQKLK  L AEF+MKDLGAA+KILG+EI RDRN  K++LSQ+ YI K
Sbjct: 981  VDDMLIACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMK 1040

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            IL RF M+ AK +  P AA+  LS    P   +E + M  VPYA+AV
Sbjct: 1041 ILERFNMAEAKVVSIPLAAHFRLSAEQRPSDQKEIDMMKNVPYASAV 1087


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
            vulgaris]
          Length = 2676

 Score =  386 bits (992), Expect = e-104
 Identities = 195/347 (56%), Positives = 257/347 (74%), Gaps = 14/347 (4%)
 Frame = +1

Query: 118  SLARDRPMRSNFGKPPNRYGFE-DMVAYALQVAEEVDTFE-PSTYKEAMG---------- 261
            +LA +R  R    KPP RY  E D V YAL VA EV+TF+ P +YKEAM           
Sbjct: 629  TLASERQRRQI--KPPQRYVEECDYVQYALTVANEVETFDDPCSYKEAMSLPDSSKWLMA 686

Query: 262  --DEMESLHKNNTWDLVQRPPERKIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEG 435
               EMESLHKNN W+LV  P ++KI+ CKW++K+KEG   + G  YKAR+VAR   Q EG
Sbjct: 687  MKQEMESLHKNNIWELVVAPKKKKIVGCKWVYKRKEGTPDSGGPIYKARVVARRFTQVEG 746

Query: 436  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPG 615
            VD++E+F PVV+H+SIRVLLA+ A ++LEL QLDVKTAFLHG+LEE IYM QP GF+V G
Sbjct: 747  VDFHEVFPPVVKHSSIRVLLALEAMEDLELHQLDVKTAFLHGDLEEEIYMKQPKGFEVEG 806

Query: 616  KEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLY 795
            KE+HVC+L KSLYGLKQSPRQWY+RFDS+M+   + RS YD CVY+ +L +GS+IYL+LY
Sbjct: 807  KEEHVCRLVKSLYGLKQSPRQWYRRFDSFMLAHEFTRSSYDSCVYYKELVSGSFIYLLLY 866

Query: 796  VDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQK 975
            VDDML+A ++  ++  LK LL++ F+MK+LG A+KILGMEI+RDR++  L+LSQ+ YI+K
Sbjct: 867  VDDMLVACKHLIEVNNLKKLLNSGFDMKNLGEAKKILGMEIWRDRSKGVLYLSQRRYIEK 926

Query: 976  ILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEKEYMSRVPYANAV 1116
            +L RF M+ AKP+ TP  ++  LS    P+S+EE+  M+ +PY +AV
Sbjct: 927  VLERFSMNNAKPVSTPLGSHFKLSKELCPQSEEEERAMAHIPYTSAV 973


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
            Group] gi|22655747|gb|AAN04164.1| Putative
            retrotransposon protein [Oryza sativa Japonica Group]
            gi|31431214|gb|AAP53029.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1229

 Score =  384 bits (986), Expect = e-104
 Identities = 193/312 (61%), Positives = 238/312 (76%), Gaps = 1/312 (0%)
 Frame = +1

Query: 184  DMVAYALQVAEEVD-TFEPSTYKEAMGDEMESLHKNNTWDLVQRPPERKIITCKWIFKKK 360
            DMV YA   AE+V+ T EP+TY EA+ +EM+SL KN TW+LV    ++K + CKWIFK+K
Sbjct: 746  DMVYYAFSCAEQVENTLEPATYTEAVQEEMQSLEKNGTWELVHLLKQKKPVHCKWIFKRK 805

Query: 361  EGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDV 540
            EG+SP+   ++ ARLVA+G  Q  GVDYN++FSPVV+H+SIR    IVA  +LELEQLDV
Sbjct: 806  EGLSPSGPPRFNARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDV 865

Query: 541  KTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQIGY 720
            KT FLHGELEE IYM QP+GF VPGKED VCKLK+SLYGLKQSPRQWYKRFDS+M+  G+
Sbjct: 866  KTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGF 925

Query: 721  NRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSAEFEMKDLGAARK 900
             RS +D CVY  K  NGS+IYL+LYVDDMLIAA++K  I  LK  LS+EF+MKDL A++K
Sbjct: 926  KRSEFDSCVY-IKFVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASKK 984

Query: 901  ILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHLSTAFAPKSDEEK 1080
            ILGMEI RD N   LFLSQ+ YI+K+L RF +  AKP+ TP A +  LS      +DE+ 
Sbjct: 985  ILGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKPVSTPIAPHFKLSALQCTSTDEDV 1044

Query: 1081 EYMSRVPYANAV 1116
            EYMSRVPY++ V
Sbjct: 1045 EYMSRVPYSSVV 1056


>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
          Length = 576

 Score =  381 bits (978), Expect = e-103
 Identities = 197/324 (60%), Positives = 240/324 (74%), Gaps = 13/324 (4%)
 Frame = +1

Query: 184  DMVAYALQVAEEVD-TFEPSTYKEA------------MGDEMESLHKNNTWDLVQRPPER 324
            DMV YA    E+V+ T EP+TY EA            M +EM+SL KN TW LV  P ++
Sbjct: 121  DMVYYAFSCVEQVENTLEPATYTEAVVSGDRENWISAMQEEMQSLEKNGTWKLVHLPKQK 180

Query: 325  KIITCKWIFKKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIV 504
            K + CKWIFK+KEG+SP+E  ++KARLVA+G  Q  GVDYN++FSPVV+H+SIR   +IV
Sbjct: 181  KPVHCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIV 240

Query: 505  AHQNLELEQLDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWY 684
            A  +LEL+QLDVKT FLHGELE+ IYM QP+GF VPGKED+VCKLK+SLYGLKQSPRQWY
Sbjct: 241  AMDDLELKQLDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 300

Query: 685  KRFDSYMIQIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSA 864
            KRFDS+M+  G+  S +D CVY  K  NGS IYL+LYVDDMLIAA++K  I  LK  LS+
Sbjct: 301  KRFDSFMLSHGFKWSEFDSCVY-IKFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSS 359

Query: 865  EFEMKDLGAARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHL 1044
            EF+MKDLGAA+KILGMEI RD N   LFLSQ+ YI+K+L  F M  AKPI TP AA+  L
Sbjct: 360  EFDMKDLGAAKKILGMEITRDINFGLLFLSQQSYIKKVLEHFNMHDAKPISTPIAAHFKL 419

Query: 1045 STAFAPKSDEEKEYMSRVPYANAV 1116
            S      +DE+  YMSRVPY++AV
Sbjct: 420  SALQCASTDEDVGYMSRVPYSSAV 443


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
            gi|18542925|gb|AAL75759.1| Putative pol polyprotein
            [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1005

 Score =  380 bits (976), Expect = e-102
 Identities = 196/315 (62%), Positives = 239/315 (75%), Gaps = 4/315 (1%)
 Frame = +1

Query: 184  DMVAYALQVAEEV-DTFEPSTYKEA---MGDEMESLHKNNTWDLVQRPPERKIITCKWIF 351
            DMV YA   AE+V +T EP+TY EA   M +EM+SL KN TW+LV  P ++K + CKWIF
Sbjct: 481  DMVYYAFSCAEQVKNTLEPATYTEAVVAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIF 540

Query: 352  KKKEGMSPAEGVKYKARLVARGIQQKEGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQ 531
            K+KEG+SP+E  ++KA+LVA+G  Q  GVDYN++FSPVV+H+SIR   +IVA  +LELEQ
Sbjct: 541  KRKEGLSPSEPPRFKAKLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQ 600

Query: 532  LDVKTAFLHGELEEAIYMTQPDGFQVPGKEDHVCKLKKSLYGLKQSPRQWYKRFDSYMIQ 711
            LDVKTAFLHGELEE IYM QP+GF VPGKE +VCKLK+S YGLKQSPRQWYKRFD +M+ 
Sbjct: 601  LDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQWYKRFDLFMLS 660

Query: 712  IGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQKLKGLLSAEFEMKDLGA 891
             G+ RS +D CVY  K  NGS IYL LYVDDMLIAA++K  I  LK  LS+EF+MKDLGA
Sbjct: 661  HGFKRSEFDSCVY-IKFVNGSPIYL-LYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGA 718

Query: 892  ARKILGMEIYRDRNQKKLFLSQKGYIQKILSRFGMSTAKPIDTPSAANIHLSTAFAPKSD 1071
            A+KILGMEI RDRN   LFLSQ+ YI+ +L RF M  AK +  P A +  LS      +D
Sbjct: 719  AKKILGMEITRDRNSGLLFLSQQSYIKNVLQRFNMHDAKLVSIPIAPHFKLSVLQCASTD 778

Query: 1072 EEKEYMSRVPYANAV 1116
            E+ EYMSRVPY++AV
Sbjct: 779  EDVEYMSRVPYSSAV 793