BLASTX nr result
ID: Anemarrhena21_contig00022838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00022838
(553 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 141 2e-31
ref|XP_010682494.1| PREDICTED: uncharacterized protein LOC104897... 128 1e-27
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 128 2e-27
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 128 2e-27
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 127 4e-27
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 127 4e-27
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 125 9e-27
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936... 124 3e-26
ref|XP_008228034.1| PREDICTED: putative ribonuclease H protein A... 122 8e-26
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 119 9e-25
ref|XP_008341993.1| PREDICTED: uncharacterized protein LOC103404... 119 9e-25
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 119 1e-24
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 118 1e-24
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 117 2e-24
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A... 115 9e-24
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 115 9e-24
ref|XP_010473926.1| PREDICTED: uncharacterized protein LOC104753... 115 1e-23
ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844... 115 1e-23
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 115 2e-23
ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein A... 113 6e-23
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 141 bits (355), Expect = 2e-31
Identities = 68/169 (40%), Positives = 107/169 (63%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF + ME+L I G WKP+ SRGG+G+SH+FFA+DL L AT+ Q K
Sbjct: 1112 PLAPYLFNIVMERLAYDIQSKVTAGCWKPIKISRGGIGISHLFFADDLMLFGEATERQAK 1171
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHS-IRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+M++ ++TF SG +N KS +F S +H+ +R+ + D +P++D L YLG+ +
Sbjct: 1172 IMIDCLNTFSSTSGLQVNLSKSTIFCSPNLHAGLRKQIGDKMNIPTSDNLGTYLGIPMLQ 1231
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
R SR ++ +++++++KL +AS LN+ GR L QSS+ S+P Y Q
Sbjct: 1232 KRVSRHTFSSVVEKMRKKLATWKASTLNMAGRRILVQSSLASVPTYTMQ 1280
>ref|XP_010682494.1| PREDICTED: uncharacterized protein LOC104897333 [Beta vulgaris
subsp. vulgaris]
Length = 506
Score = 128 bits (322), Expect = 1e-27
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYL+++CME+L I G WKPV ASR G +S++ FA+DL L S A+ +Q +
Sbjct: 283 PLSPYLYVICMERLAHLIDKEVRSGGWKPVRASRHGPQISNLAFADDLILFSEASVDQAE 342
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++M + F SG +++ KS+VFFS+ + +R + + + +T+ L +YLGV I+
Sbjct: 343 VIMACLDKFCHASGSKVSRSKSQVFFSKNTNYDVRDAVSGILNMETTNDLGRYLGVPTIN 402
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
GR S+ Y +++ RI +KL + L++ GR TL Q+S+ +IP YA Q
Sbjct: 403 GRSSKQEYQYLVDRINDKLSGWKTKTLSMAGRATLIQASLSTIPCYAMQ 451
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 128 bits (321), Expect = 2e-27
Identities = 63/170 (37%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+VPYLF L ME+L I WKPV+ +RGG G+SH+FFA+DL L A+++Q +
Sbjct: 1174 PLVPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQ 1233
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHS-IRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+M + + +F SG +N KS +F S V++ +++ + + +VP + L YLG+ +
Sbjct: 1234 IMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLK 1293
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQI 550
R SR ++ +I +++ KL +AS LN+ GR L Q+S+ ++P Y Q+
Sbjct: 1294 ERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQV 1343
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 128 bits (321), Expect = 2e-27
Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYL+++CME+L I G WKPV ASR G +S++ FA+DL L S A+ Q +
Sbjct: 644 PLSPYLYVICMERLAHLIDQEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASVEQAQ 703
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVH-SIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+M + F + SG +N+DKSK++FS H IR + + + +T KYLGV I+
Sbjct: 704 VMKWCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTIN 763
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
GR S+ Y +++ RI KL + L++ GR TL QS+ SIP Y Q
Sbjct: 764 GRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQ 812
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 127 bits (318), Expect = 4e-27
Identities = 62/170 (36%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF L ME+L I WKPV+ +RGG G+SH+FFA+DL L A+++Q +
Sbjct: 642 PLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQ 701
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHS-IRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+M + + +F SG +N KS +F S V++ +++ + + +VP + L YLG+ +
Sbjct: 702 IMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLK 761
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQI 550
R SR ++ +I +++ KL +AS LN+ GR L Q+S+ ++P Y Q+
Sbjct: 762 ERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQV 811
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 127 bits (318), Expect = 4e-27
Identities = 62/170 (36%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF L ME+L I WKPV+ +RGG G+SH+FFA+DL L A+++Q +
Sbjct: 642 PLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQ 701
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHS-IRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+M + + +F SG +N KS +F S V++ +++ + + +VP + L YLG+ +
Sbjct: 702 IMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLK 761
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQI 550
R SR ++ +I +++ KL +AS LN+ GR L Q+S+ ++P Y Q+
Sbjct: 762 ERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQV 811
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 125 bits (315), Expect = 9e-27
Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 2/170 (1%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PY+F+LC+E+L I+ + G WKP+ +R G LSH+FFA+DL LS A+ Q
Sbjct: 1134 PLSPYIFVLCIERLSHGISRSIQQGHWKPIRLARMGTPLSHLFFADDLLFLSEASSQQAI 1193
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHSIR--QLLFDLCEVPSTDKLDKYLGVQCI 397
++ +++ F SG +NK K+ V+FS + ++ ++ DL TD L KYLGV
Sbjct: 1194 IINKIIDEFSASSGAKVNKSKTLVYFSANISAMEASRIGSDL-GYSVTDNLGKYLGVPLC 1252
Query: 398 HGRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
H R S+ +Y I+ +I ++L AS L L GR+TLAQS + +I +YA Q
Sbjct: 1253 HSRISKQTYQSIVDKIDQRLSGWNASHLTLAGRITLAQSVLQAISVYAMQ 1302
>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
bretschneideri]
Length = 1365
Score = 124 bits (310), Expect = 3e-26
Identities = 62/169 (36%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LCMEKL I WKPV SR G +SH+FFA+DL L + A+ Q K
Sbjct: 637 PLSPYLFVLCMEKLSHIINGCITTKKWKPVKLSRYGPPVSHLFFADDLILFAEASSTQAK 696
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHSIRQL-LFDLCEVPSTDKLDKYLGVQCIH 400
L+ + + F +SG+ +N DKS ++ S + + + + ++C P T L +YLGV +H
Sbjct: 697 LLKDCLDIFCAVSGQQVNFDKSCIYCSPNISRSKAIEIANICGSPLTSDLGQYLGVPLLH 756
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
R ++ +Y +I+++++ +L +++ L++ GR+ QS +IPIY+ Q
Sbjct: 757 SRVNKETYGNIVEKVQRRLSAWKSNTLSMAGRLVYLQSVASAIPIYSMQ 805
>ref|XP_008228034.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 751
Score = 122 bits (307), Expect = 8e-26
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LC+EKL I W+PV +S+ G +SH+FFA+DL L + A+ +Q K
Sbjct: 218 PLSPYLFVLCIEKLSHIICDAVSKKKWRPVKSSQSGPAISHLFFADDLVLFAEASASQAK 277
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+M + F SG+V+N +KS VF S + + + +C P T+ L KYLG+ +H
Sbjct: 278 IMKSCLDLFCSASGQVVNFEKSAVFCSPNTCKEVAKEISLICGSPLTNDLGKYLGMPLLH 337
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
R + +Y ++ ++ ++L ++ L+L GR TL Q+ SIP+YA Q
Sbjct: 338 SRIGKRTYSSLVDKVHKRLAAWKSKLLSLAGRATLIQAVTTSIPVYAMQ 386
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1235
Score = 119 bits (298), Expect = 9e-25
Identities = 60/166 (36%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LCME+L I WKP+ SRGG LSH+ FA+DL L + A+ +QV+
Sbjct: 501 PLSPYLFVLCMERLCHQIEFAVAKEDWKPIKLSRGGPALSHICFADDLILFAEASVSQVR 560
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVH-SIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++ +V+ F + SG+ ++ +KS +FFS VH + L+ + + T +L KYLG+ +
Sbjct: 561 VIRKVLENFCEASGQKVSLEKSVIFFSENVHRDLATLISNESGIKGTKELGKYLGMPVLQ 620
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
+ ++ ++ +++++ KL + L+L GR+TL +S I SIP++
Sbjct: 621 KKINKETFGEVVEKVSSKLAGWKRKFLSLAGRITLTKSVISSIPVH 666
>ref|XP_008341993.1| PREDICTED: uncharacterized protein LOC103404803 [Malus domestica]
Length = 1433
Score = 119 bits (298), Expect = 9e-25
Identities = 60/169 (35%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LCMEKL I WKPV R G +SH+FFA+DL L + A+ Q +
Sbjct: 765 PLSPYLFVLCMEKLXHIIXGCITTKKWKPVKLXRNGPSVSHLFFADDLILFAEASSTQAR 824
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++ + + F +SG+ +N DKS ++ S + S + ++C P T L YLGV +H
Sbjct: 825 ILKDCLDIFCDVSGQQVNFDKSCIYCSPNISRSKAXEIANICGSPLTSDLGHYLGVPLLH 884
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
R ++ +Y +I+++++ +L +++ L++ GR+ QS +IPIY+ Q
Sbjct: 885 SRVNKETYGNIVEKVQRRLSAWKSNTLSMAGRLVYLQSVXSAIPIYSMQ 933
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 119 bits (297), Expect = 1e-24
Identities = 62/166 (37%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LC+E+L I WKP+ SRGG LSH+ FA+DL L + A+ Q++
Sbjct: 93 PLSPYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGPLLSHICFADDLILFAEASVAQIR 152
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVH-SIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++ +V+ F SG+ ++ +KSK+FFS+ VH + + + D + ST +L KYLG+ +
Sbjct: 153 VVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFISDESGIKSTKELGKYLGMPVLQ 212
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
R ++ ++ I+ R+ +L + L+L GR+TL +S + SIPI+
Sbjct: 213 KRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIH 258
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 118 bits (296), Expect = 1e-24
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF++CME+L I E WKP+ A R G +SH+ FA+DL L + A+ Q
Sbjct: 68 PLSPYLFVICMERLSHIIADQVEADYWKPMRAGRYGPPISHLLFADDLLLFAEASIEQAH 127
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++ + F + SG+ IN++K++V+FS+ V + +R+ + + L KYLG
Sbjct: 128 CVLHCLDMFCQSSGQKINREKTQVYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITP 187
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
GR SR + HII +I+ KL + L+L GR+TL++ I SIP Y Q
Sbjct: 188 GRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQ 236
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 117 bits (294), Expect = 2e-24
Identities = 65/169 (38%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PY+F+LC+E+L I WKP+ SR G LSH+FF +DL L + AT Q +
Sbjct: 68 PLSPYIFVLCVERLSHGIYQSIHQDHWKPIRLSRLGTPLSHLFFTDDLLLFAEATSGQAQ 127
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
+ V+ F SG +N+ K+ V+FS+ V ++ ++ T L KYLG+ +H
Sbjct: 128 CINSVLGDFCLSSGTKVNQSKTHVYFSKNVPDAVATRIWRDLGYTVTKDLGKYLGMPLLH 187
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYAQQ 547
R S+ +Y I+ + +KL ASQL+L GR+TL QS + ++PIYA Q
Sbjct: 188 SRVSQQTYQGILDKTDQKLLGWAASQLSLAGRITLTQSVLQAVPIYAMQ 236
>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1011
Score = 115 bits (289), Expect = 9e-24
Identities = 60/166 (36%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LCME+L I E WKP+ SRGG LSH+ FA+DL L + A+ QV+
Sbjct: 282 PLSPYLFVLCMERLCHLIEEAVEEKRWKPIKLSRGGPELSHICFADDLILFAEASVTQVR 341
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHSIR-QLLFDLCEVPSTDKLDKYLGVQCIH 400
++ +V+ F K SG+ ++ KSK+FFS V + R + + + +T L KYLG+ +
Sbjct: 342 VIRKVLEKFCKASGQKVSLPKSKIFFSNNVTTERGERISRASGIAATRDLGKYLGMPILQ 401
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
R ++ ++ +++++ +L + L+L GRVT+ ++ + SIP++
Sbjct: 402 KRINKDTFGEVLEKVASRLSGWKKQTLSLAGRVTMTKAVLSSIPVH 447
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 115 bits (289), Expect = 9e-24
Identities = 61/170 (35%), Positives = 104/170 (61%), Gaps = 5/170 (2%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGV----WKPVYASRGGLGLSHVFFANDLFLLSRATD 211
P+ PYLF+LC+E+L HL E V WKP+ S GG LSHV FA+DL L + A+
Sbjct: 501 PLSPYLFVLCLERL----CHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASV 556
Query: 212 NQVKLMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGV 388
Q++++ V+ F + SG+ ++ +KSK+FFS V + QL+ + + T +L KYLG+
Sbjct: 557 AQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGM 616
Query: 389 QCIHGRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
+ R ++ ++ +++R+ +L + L+L GR+TL ++ + SIP++
Sbjct: 617 PILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVH 666
>ref|XP_010473926.1| PREDICTED: uncharacterized protein LOC104753360 [Camelina sativa]
Length = 811
Score = 115 bits (288), Expect = 1e-23
Identities = 58/167 (34%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ P+LF+LCME+L I WKP+ SRGG LSH+ FA+DL L + A+ Q++
Sbjct: 444 PLSPFLFVLCMERLCHLIDRAVVNKQWKPISLSRGGPQLSHICFADDLILFAEASVAQIR 503
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGV-HSIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++ V+ F SG+ ++ +KSK+FFS V + +L+ + + ST L KYLG+ +
Sbjct: 504 VLRSVLEQFCGASGQKVSLEKSKIFFSNNVSRELGKLISEESGIKSTKDLGKYLGMPVLQ 563
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIYA 541
R ++ ++ +++R+ +L ++ L+L GR+TL ++ + SIP+++
Sbjct: 564 KRLNKETFGEVLERVSSRLAGWKSHTLSLAGRLTLTKALLSSIPVHS 610
>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
Length = 1834
Score = 115 bits (288), Expect = 1e-23
Identities = 61/166 (36%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LCME+L I WKP+ SRGG +SH+ FA+DL + + A+ Q++
Sbjct: 1100 PLSPYLFVLCMERLCHQIELSVANKEWKPIKLSRGGPSVSHICFADDLIMFAEASVAQIR 1159
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVH-SIRQLLFDLCEVPSTDKLDKYLGVQCIH 400
++ +V+ F SG+ ++ +KS +FFS VH + L+ D + +T L KYLG+ +
Sbjct: 1160 VIRKVLEKFCGASGQKVSLEKSLIFFSENVHRDLTTLISDESGIKATKDLGKYLGMPVLQ 1219
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
R ++ ++ II+R+ KL + L+L GR+TL +S + SIP++
Sbjct: 1220 KRINKETFGTIIERMSSKLAGWKRRFLSLAGRITLTKSVLSSIPVH 1265
>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
[Brassica rapa]
Length = 1638
Score = 115 bits (287), Expect = 2e-23
Identities = 61/170 (35%), Positives = 103/170 (60%), Gaps = 5/170 (2%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGV----WKPVYASRGGLGLSHVFFANDLFLLSRATD 211
P+ PYLF+LCME+L HL E V WKP+ SRGG LSH+ FA+DL L + A+
Sbjct: 1064 PLSPYLFVLCMERL----CHLIEFSVAKKEWKPIRLSRGGPSLSHICFADDLILFAEASI 1119
Query: 212 NQVKLMMEVMSTFGKLSGEVINKDKSKVFFSRGVH-SIRQLLFDLCEVPSTDKLDKYLGV 388
+Q++++ +V+ +F SG+ ++ +KS +FFS VH + + + T L KYLG+
Sbjct: 1120 SQIRVIRKVLESFCGASGQKVSLEKSLIFFSENVHRDLASAISHESGIKGTKDLGKYLGM 1179
Query: 389 QCIHGRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
+ R ++ ++ +I+++ KL + L+L GR+TL +S + S+P++
Sbjct: 1180 PVLQKRINKETFGAVIEKVSSKLAGWKRRFLSLAGRITLTKSVLSSVPVH 1229
>ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 782
Score = 113 bits (282), Expect = 6e-23
Identities = 60/166 (36%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Frame = +2
Query: 44 PVVPYLFLLCMEKLGSYITHLTEIGVWKPVYASRGGLGLSHVFFANDLFLLSRATDNQVK 223
P+ PYLF+LCME+L I E WKP+ SRGG LSH+ FA+DL L + A+ QV+
Sbjct: 53 PLSPYLFVLCMERLCHLIEEAVEEKRWKPIKLSRGGPELSHICFADDLILFAEASVTQVR 112
Query: 224 LMMEVMSTFGKLSGEVINKDKSKVFFSRGVHSIR-QLLFDLCEVPSTDKLDKYLGVQCIH 400
++ +V+ F K SG+ ++ KSK+FFS V + R + + + +T L KYLG+ +
Sbjct: 113 VIRKVLEKFCKASGQKVSLPKSKIFFSNNVTTERGERISRASGIAATRDLGKYLGMPILQ 172
Query: 401 GRKSRTSY*HIIQRIKEKLGQ*QASQLNLTGRVTLAQSSIMSIPIY 538
R ++ ++ +++++ L + L+L GRVT ++ + SIP++
Sbjct: 173 KRINKDTFGEVLEKVASLLSGWKKQTLSLAGRVTTTKAVLSSIPVH 218