BLASTX nr result
ID: Anemarrhena21_contig00022079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00022079
(596 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 50 2e-11
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 50 3e-11
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc... 51 6e-11
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 48 7e-11
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 51 9e-11
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g... 50 9e-11
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 60 2e-10
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 47 2e-10
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 50 3e-10
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 48 8e-10
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 56 2e-09
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 48 5e-09
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 48 5e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 48 6e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 46 1e-08
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 47 2e-08
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 47 2e-08
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 44 2e-08
ref|XP_009593202.1| PREDICTED: uncharacterized protein LOC104089... 49 2e-08
emb|CAD41329.2| OJ991113_30.13 [Oryza sativa Japonica Group] 53 2e-08
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 50.4 bits (119), Expect(2) = 2e-11
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 VKEHLHNKDKIDK--QLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL---------V 149
V E L N++K+ Q + + QV E+ S D+ K ++
Sbjct: 173 VYEALQNREKMKGMVQSDASSSKGKALQVRGRSEQRTYNDSNDRDKSQSRGRSKSRGKKF 232
Query: 150 CN*CHKNGHIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNI 314
C C K H +CW + K+ +VV AE + D D L F + + D W +
Sbjct: 233 CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAE-NSDSADCLVFFAGCVASHDEWIL 291
Query: 315 DSGCSQLISSNRKIFSSYTSVQ 380
D+ C LI NR FSS+ SVQ
Sbjct: 292 DTACLFLICINRDWFSSHKSVQ 313
Score = 45.1 bits (105), Expect(2) = 2e-11
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+G+V+ M + + G G++Q +HDG T + V H+P NLI L L EG+K+
Sbjct: 314 NGDVVRMGDNNPREIMGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKY 372
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 49.7 bits (117), Expect(2) = 3e-11
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 VKEHLHNKDKIDK--QLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL---------V 149
V E L N++K+ Q + ++ QV E+ S+D+ K ++
Sbjct: 176 VYEALQNREKMKGMVQSDASSSKGEALQVRGRSEQRTYNDSSDRDKSQSRGRSKSRGKKF 235
Query: 150 CN*CHKNGHIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNI 314
C C K H +CW + K+ +VV AE + D D L + + D W +
Sbjct: 236 CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAE-NSDSGDCLVVFAGCVASHDEWIL 294
Query: 315 DSGCSQLISSNRKIFSSYTSVQ 380
D+ CS I NR FSSY SVQ
Sbjct: 295 DTACSFHICINRDWFSSYKSVQ 316
Score = 45.1 bits (105), Expect(2) = 3e-11
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+G+V+ M + G G++Q +HDG T + V H+P NLI L L EG+K+
Sbjct: 317 NGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKY 375
>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 51.2 bits (121), Expect(2) = 6e-11
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Frame = +3
Query: 3 VKEHLHNKDKIDK--QLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL---VCN*CHK 167
V E L N++K+ Q + ++ QV E+ S D K ++ +C C K
Sbjct: 98 VYEALQNREKMKGMVQSDASSSKGEALQVRGRFERRTYNDSNDHDKSQSRGKKLCKYCKK 157
Query: 168 NGHIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNIDSGCSQ 332
H +CW + K+ +VV A+ + D D L + N D W +D+ CS
Sbjct: 158 KNHFIEECWNLQNKEKRKSDGKASVVTSAD-NSDSGDCLVVFAGCVANHDEWILDTACSF 216
Query: 333 LISSNRKIFSSYTSVQ 380
I NR FSSY SVQ
Sbjct: 217 HICINRDWFSSYKSVQ 232
Score = 42.7 bits (99), Expect(2) = 6e-11
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+G+V+ M + G G++Q +HDG T + V H+P NLI L L EG+K+
Sbjct: 233 NGDVVRMGDDNPRVIMGIGSVQIKTHDGMTRTLKYVRHIPGMARNLISLSTLDAEGYKY 291
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 47.8 bits (112), Expect(2) = 7e-11
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 VKEHLHNKDKIDK--QLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL---------V 149
V E L N++K+ Q + ++ QV E+ S D+ K+++
Sbjct: 71 VYEALQNREKMKGMVQSDASSSKGEALQVRGRSEQRTYNDSNDRDKNQSRGRSKSRGKKF 130
Query: 150 CN*CHKNGHIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNI 314
C C K H +CW + K+ +VV A+ + D D L + + D W +
Sbjct: 131 CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAD-NSDSGDCLVVFVVCVSSHDEWIL 189
Query: 315 DSGCSQLISSNRKIFSSYTSVQ 380
D+ CS I NR FSSY SVQ
Sbjct: 190 DTTCSFHICINRDWFSSYKSVQ 211
Score = 45.8 bits (107), Expect(2) = 7e-11
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+G+V+ M + G G++Q +HDG T + V H+P NLI L L EG+K+
Sbjct: 212 NGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKY 270
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 50.8 bits (120), Expect(2) = 9e-11
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL----VCN*CHKN 170
V+ LH+++ K S +++ N +KP K VCN C +
Sbjct: 172 VRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEK 231
Query: 171 GHIRVDCWIYKKKQPDTNVVKLAEGDED---KCDVLSFTNSSIDNKDRWNIDSGCSQLIS 341
GH + DC KKKQ + V A +ED + D+ + + D W +DSG S I
Sbjct: 232 GHWKFDC-PKKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHIC 290
Query: 342 SNRKIFSSYTSVQG 383
R+ F++Y V G
Sbjct: 291 PRREWFTTYEQVDG 304
Score = 42.4 bits (98), Expect(2) = 9e-11
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +2
Query: 380 GEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G I M S++ V G G+I+ +HDG T V HVP NLI L L +GF +
Sbjct: 304 GGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFSW 361
>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
Japonica Group]
Length = 759
Score = 50.1 bits (118), Expect(2) = 9e-11
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDDSNQVFFTKEKSNNESST---DKPKHKNLVCN*CHKNG 173
V E L N++K+ + R S Q + ++S + KP+ K C C K
Sbjct: 119 VYEALQNREKMKCMV-----RGRSEQRTYNDSNDRDKSQSRGRSKPRGKKF-CKYCKKKN 172
Query: 174 HIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNIDSGCSQLI 338
H +CW + K+ +VV A+ + D D L + + D W +D+ CS I
Sbjct: 173 HFIEECWKLQNKEKRKYDGKASVVTSAD-NSDSGDCLVVFAGCVASHDEWILDTACSFHI 231
Query: 339 SSNRKIFSSYTSVQ 380
NR FSSY SVQ
Sbjct: 232 CINRDWFSSYKSVQ 245
Score = 43.1 bits (100), Expect(2) = 9e-11
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+G+V+ M + G G++Q +HDG T + H+P NLI L L EG+K+
Sbjct: 246 NGDVVRMGDDNPRGIMGIGSVQIKTHDGMTRTLKDARHIPGMARNLISLSTLDSEGYKY 304
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Frame = +3
Query: 6 KEHLHNKDKIDKQLTCEFYRDDSNQVF--------FTKEKSNNESSTDKPKHKNLVCN*C 161
K+ + ++KI L + R + N+ K K ++E+ K K K C C
Sbjct: 168 KDTVKTEEKISSLLARDLRRSNKNEAMEASQAESLLVKAKHDHEAGVSKSKDKGARCYKC 227
Query: 162 HKNGHIRVDCWIYKKKQPDTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNIDSGCSQLIS 341
H+ GHIR +C + KK++ + D D + T S+ + + W +DS S ++
Sbjct: 228 HEFGHIRRNCPLLKKRKGGIASLAARGDDSDSSSHETLTVSNEKSGEAWMLDSASSYHVT 287
Query: 342 SNRKIFSSYTS 374
S R+ FSSY S
Sbjct: 288 SKREWFSSYKS 298
Score = 32.0 bits (71), Expect(2) = 2e-10
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 374 GSGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL 532
G V+++ V G G ++F +DG V H+P R +LI L L
Sbjct: 299 GDFGVVYLGDDTSYRVVGVGDVKFEMYDGNEVLLSDVRHMPGLRKSLISLGSL 351
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 47.4 bits (111), Expect(2) = 2e-10
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 VKEHLHNKDKIDK--QLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL---------V 149
V E L N++K+ Q + ++ QV E+ S D+ K K+
Sbjct: 176 VYEALQNREKMKGMVQSDASSSKGEALQVKGRSEQRTYNDSNDRDKSKSRGRSKSRGKKF 235
Query: 150 CN*CHKNGHIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNI 314
C C K H +CW + K+ +VV A+ + D D L + + D W +
Sbjct: 236 CKYCKKKIHFIKECWKLQNKEKRKSDGKASVVTSAK-NSDSGDCLVVFAGCVASHDEWIL 294
Query: 315 DSGCSQLISSNRKIFSSYTSVQ 380
D+ CS I NR FSSY SVQ
Sbjct: 295 DTACSFHIYINRDWFSSYKSVQ 316
Score = 44.7 bits (104), Expect(2) = 2e-10
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+G+V+ M + G G++Q +HDG T + V H+P NLI L L EG+K+
Sbjct: 317 NGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEGYKY 375
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 50.1 bits (118), Expect(2) = 3e-10
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 25/152 (16%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDDSNQVFF--------TKEKSNNESST-----DKPKHKN 143
V + LH K+K+ K + E + T KS ++SS+ K + +
Sbjct: 116 VYDALHAKEKMKKMVPSEGSNSQPESLVVRGRQQEKNTDNKSRDKSSSGYRGRSKSRGRY 175
Query: 144 LVCN*CHKNGHIRVDCWIY------------KKKQPDTNVVKLAEGDEDKCDVLSFTNSS 287
C C + GH DCW K KQ + +A ++ ++L
Sbjct: 176 KSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPDAELLVAYAGC 235
Query: 288 IDNKDRWNIDSGCSQLISSNRKIFSSYTSVQG 383
+ D W +D+GC+ + NR F++Y VQG
Sbjct: 236 VQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQG 267
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 380 GEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G + M + VAG GTIQ DG I T V H+P + NLI L L +G+++
Sbjct: 267 GGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRY 324
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 47.8 bits (112), Expect(2) = 8e-10
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Frame = +3
Query: 3 VKEHLHNKDKIDK--QLTCEFYRDDSNQVFFTKEKSNNESSTDKPKHKNL---------V 149
V E L N++K+ Q + ++ QV E+ S D K ++
Sbjct: 176 VYEALQNREKMKGMVQSYASSSKGEALQVRGRSEQRTYNDSNDHDKSQSRGRSKSRGKKF 235
Query: 150 CN*CHKNGHIRVDCWIYKKKQP-----DTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNI 314
C C K H +CW + K+ +VV AE + D D L + + D W +
Sbjct: 236 CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAE-NSDSGDCLVVFAGYVASHDEWIL 294
Query: 315 DSGCSQLISSNRKIFSSYTSVQGK 386
D+ CS I NR FSSY SVQ +
Sbjct: 295 DTACSFHICINRDWFSSYKSVQNE 318
Score = 42.4 bits (98), Expect(2) = 8e-10
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 383 EVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
+V+ M + G G++Q +HDG T + V H+P NLI L L EG+K+
Sbjct: 319 DVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKY 375
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 31/94 (32%), Positives = 47/94 (50%)
Frame = +3
Query: 93 KEKSNNESSTDKPKHKNLVCN*CHKNGHIRVDCWIYKKKQPDTNVVKLAEGDEDKCDVLS 272
K K ++E+ K K K C CH+ GHIR +C + KK++ + D D
Sbjct: 204 KAKHDHEAGVSKSKEKGARCYKCHEFGHIRRNCPLLKKRKDGIASLAARGDDSDSSSHEI 263
Query: 273 FTNSSIDNKDRWNIDSGCSQLISSNRKIFSSYTS 374
T S+ + + W +DS S ++S R+ FSSY S
Sbjct: 264 LTVSNEKSGEAWMLDSASSYHVTSKREWFSSYKS 297
Score = 32.7 bits (73), Expect(2) = 2e-09
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 374 GSGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL 532
G V+++ V G G ++F +DG V HVP R +LI L L
Sbjct: 298 GDFGVVYLGDDTSYRVVGVGDVKFKMYDGNEVLLSDVRHVPGLRKSLISLGSL 350
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 47.8 bits (112), Expect(2) = 5e-09
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDD--------SNQVFFTKEKSNNESSTD-----KPKHKN 143
V + LH K+K+ K + E S Q T KS ++SS+ K + +
Sbjct: 159 VYDALHAKEKMKKMVPSEGSNSQAEGLVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRY 218
Query: 144 LVCN*CHKNGHIRVDCWIYKKKQPDTN--VVKLAEGDEDKCDVLSFTNSSID-------- 293
C C ++GH CW + K T + K + DE K V++ S +
Sbjct: 219 KSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGC 278
Query: 294 --NKDRWNIDSGCSQLISSNRKIFSSYTSVQG 383
D+W +D+ C+ + NR F++Y VQG
Sbjct: 279 AQTSDQWILDTACTYHMCPNRDWFATYEVVQG 310
Score = 39.7 bits (91), Expect(2) = 5e-09
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 380 GEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G + M VAG GT+Q DG I T V H+P + +LI L L +G+K+
Sbjct: 310 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKY 367
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 48.1 bits (113), Expect(2) = 5e-09
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDDSNQVFF--------TKEKSNNESSTD-----KPKHKN 143
V + LH K+K+ K + E + + TK +S ++SS+ K + +
Sbjct: 116 VYDALHTKEKMKKMVPSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYRGRSKSRGRY 175
Query: 144 LVCN*CHKNGHIRVDCWIYKKKQPDTN--VVKLAEGDEDKCDVLSFTNSSID-------- 293
C C ++GH +CW + K T + K + +E K +++ S +
Sbjct: 176 KSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYAGC 235
Query: 294 --NKDRWNIDSGCSQLISSNRKIFSSYTSVQG 383
D+W +D+ C+ + NR F++Y +VQG
Sbjct: 236 AQTSDQWILDTACTYHMCPNRDWFATYEAVQG 267
Score = 39.3 bits (90), Expect(2) = 5e-09
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +2
Query: 380 GEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G + M VAG G +Q DG I T V H P + +LI LR L +G+K+
Sbjct: 267 GGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLDRKGYKY 324
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 47.8 bits (112), Expect(2) = 6e-09
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDDSNQVFFT---KEKSNNESSTDKP----------KHKN 143
V + LH K+K+ K + E + + +EK+ N S DK + +
Sbjct: 83 VYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRY 142
Query: 144 LVCN*CHKNGHIRVDCWIYKKKQPDTN--VVKLAEGDEDKCDVLSFTNSSID-------- 293
C C ++GH +CW + K T + K + +E K V++ S +
Sbjct: 143 KSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGC 202
Query: 294 --NKDRWNIDSGCSQLISSNRKIFSSYTSVQG 383
D+W +D+ C+ + NR F++Y +VQG
Sbjct: 203 AQTSDQWILDTACTYHMCPNRDWFATYEAVQG 234
Score = 39.3 bits (90), Expect(2) = 6e-09
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 380 GEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G + M VAG GT+Q DG I T V H+P + +LI L L +G+K+
Sbjct: 234 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKY 291
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 46.2 bits (108), Expect(2) = 1e-08
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Frame = +3
Query: 3 VKEHLHNKDKIDKQLTCEFYRDD--------SNQVFFTKEKSNNESSTD-----KPKHKN 143
V + LH K+K+ K + E S Q T KS ++SS+ K + +
Sbjct: 174 VYDALHAKEKMKKMVPSEGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRY 233
Query: 144 LVCN*CHKNGHIRVDCWIYKKKQPDTN--VVKLAEGDEDKCDVLSFTNSSID-------- 293
C C ++GH CW + K T + K + +E K V++ S +
Sbjct: 234 KSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGC 293
Query: 294 --NKDRWNIDSGCSQLISSNRKIFSSYTSVQG 383
D+W +D+ C+ + NR F++Y VQG
Sbjct: 294 AQTSDQWILDTACTYHMCPNRDWFATYEVVQG 325
Score = 40.0 bits (92), Expect(2) = 1e-08
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 380 GEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G + M VAG GT+Q DG I T V H+P + +LI L L +G+K+
Sbjct: 325 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKY 382
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 46.6 bits (109), Expect(2) = 2e-08
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Frame = +3
Query: 90 TKEKSNNESS-----------TDKPKHKNLVCN*CHKNGHIRVDCWIYKKKQP-DTNVVK 233
+K K+NN + KPK + N C K GH VDC + KK +P + NV+
Sbjct: 250 SKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFN-CGKQGHKSVDCRLPKKNKPKEANVID 308
Query: 234 LAEG---DEDKCDVLSFTNSSIDNKDRWNIDSGCSQLISSNRKIFSSYTSVQ 380
D D V+S N N W ID+G ++ + S++K+FS++ ++
Sbjct: 309 DITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIE 360
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFK 550
+GE +FM SA S + G+G + G+ T V +VPE R NL+ L GF+
Sbjct: 361 NGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFR 418
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 46.6 bits (109), Expect(2) = 2e-08
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Frame = +3
Query: 90 TKEKSNNESS-----------TDKPKHKNLVCN*CHKNGHIRVDCWIYKKKQP-DTNVVK 233
+K K+NN + KPK + N C K GH VDC + KK +P + NV+
Sbjct: 171 SKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFN-CGKQGHKSVDCRLPKKNKPKEANVID 229
Query: 234 LAEG---DEDKCDVLSFTNSSIDNKDRWNIDSGCSQLISSNRKIFSSYTSVQ 380
D D V+S N N W ID+G ++ + S++K+FS++ ++
Sbjct: 230 DITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIE 281
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFK 550
+GE +FM SA S + G+G + G+ T V +VPE R NL+ L GF+
Sbjct: 282 NGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFR 339
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 43.9 bits (102), Expect(2) = 2e-08
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 377 SGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKFR 556
+G + + + NV G GT+ + HDG+ T + V HVP+ + NLI L L G+ F+
Sbjct: 202 NGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSGYNFK 261
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = +3
Query: 99 KSNNES-STDKPKHKNLVCN*CHKNGHIRVDC---WIYKKKQPDTNVVKLAEGDEDKCDV 266
KS ++S S K ++N+ C C+K G IR C +K Q + + +G D +V
Sbjct: 108 KSRSKSKSKGKKDYRNVKCYHCNKIGQIRRICPDRQQEEKTQAQGSAAIIDDG-YDSTEV 166
Query: 267 LSFTNSSIDNKDRWNIDSGCSQLISSNRKIFSSYTSVQG 383
L+ + N + W +DSGC+ + R FSSY V G
Sbjct: 167 LTIRLNP--NHEEWVLDSGCTYHMCPRRDWFSSYQEVNG 203
>ref|XP_009593202.1| PREDICTED: uncharacterized protein LOC104089897 [Nicotiana
tomentosiformis]
Length = 411
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +2
Query: 374 GSGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G E++FM+ SA + + G G I G+I T V HVPE R NL+ L GFK+
Sbjct: 327 GPNEIVFMENSATAKIEGTGKIALKMTSGKIVTLNNVLHVPEMRKNLVSTSLLVKNGFKY 386
Score = 36.2 bits (82), Expect(2) = 2e-08
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 159 CHKNGHIRVDCWIYKK--KQPDTNVVKLAEGDEDKCDVLSFTNSSIDNKDRWNIDSGCSQ 332
C K H +C KK K+ N+++ + +D C +L N + N W IDSG ++
Sbjct: 253 CGKVVHKAAECRAPKKDKKKSQANMIEKNDEIDDLCTMLLECNL-VGNPREWWIDSGETR 311
Query: 333 LISSNRKIFSSY 368
+ +N++ F+SY
Sbjct: 312 HVCANKEFFTSY 323
>emb|CAD41329.2| OJ991113_30.13 [Oryza sativa Japonica Group]
Length = 353
Score = 52.8 bits (125), Expect(2) = 2e-08
Identities = 31/94 (32%), Positives = 45/94 (47%)
Frame = +3
Query: 93 KEKSNNESSTDKPKHKNLVCN*CHKNGHIRVDCWIYKKKQPDTNVVKLAEGDEDKCDVLS 272
K K + E+ K K K C CH+ GHIR C + KK++ + D D
Sbjct: 133 KAKHDYEAGVSKSKEKGARCYKCHEFGHIRRICPLLKKRKGGIASLAARGDDSDSSSHEI 192
Query: 273 FTNSSIDNKDRWNIDSGCSQLISSNRKIFSSYTS 374
T S+ + + W +DS S ++S R+ FSSY S
Sbjct: 193 LTVSNEKSGEAWMLDSASSYHVTSKREWFSSYKS 226
Score = 32.3 bits (72), Expect(2) = 2e-08
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 374 GSGEVIFMKKSAMSNVAGEGTIQFHSHDGRITTFQGVHHVPESRYNLIPLRGL*GEGFKF 553
G V+++ V G G ++F +DG V H+P R +LI L L G+ +
Sbjct: 227 GDFGVVYLGDDTSYRVVGVGDVKFKMYDGNEVLLSDVRHMPGLRKSLISLGSLHETGWLY 286
Query: 554 R 556
+
Sbjct: 287 Q 287